RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 KRTAP1-4P0C5Y4 121 aa14.3□□□□□ -0.12
SSX2IP-209ENST00000603677 FABP4P15090 132 aa14.3□□□□□ -0.12
SSX2IP-209ENST00000603677 HERVK_113P61574 105 aa14.3□□□□□ -0.12
SSX2IP-209ENST00000603677 NDUFA12Q9UI09 145 aa14.3□□□□□ -0.12
SSX2IP-209ENST00000603677 LEPROTO15243 131 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BKO60814 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BJP06899 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BOP23527 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BBP33778 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BDP58876 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BCP62807 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST2H2BEQ16778 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BHQ93079 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BNQ99877 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 HIST1H2BMQ99879 126 aa14.29□□□□□ -0.12
SSX2IP-209ENST00000603677 GAGE10A6NGK3 116 aa14.27□□□□□ -0.13
SSX2IP-209ENST00000603677 IGKCP01834 107 aa14.27□□□□□ -0.13
SSX2IP-209ENST00000603677 NMUP48645 174 aa14.27□□□□□ -0.13
SSX2IP-209ENST00000603677 MEIG1Q5JSS6 88 aa14.27□□□□□ -0.13
SSX2IP-209ENST00000603677 HMCN2Q8NDA2 5059 aa14.26□□□□□ -0.13
SSX2IP-209ENST00000603677 SMIM13P0DJ93 91 aa14.24□□□□□ -0.13
SSX2IP-209ENST00000603677 KRTAP13-1Q8IUC0 172 aa14.24□□□□□ -0.13
SSX2IP-209ENST00000603677 PRR26Q8N8Z3 221 aa14.24□□□□□ -0.13
SSX2IP-209ENST00000603677 IGKV2-28A0A075B6P5 120 aa14.23□□□□□ -0.13
SSX2IP-209ENST00000603677 IGKV2D-26A0A0A0MRZ7 120 aa14.23□□□□□ -0.13
SSX2IP-209ENST00000603677 M0R378 163 aa14.23□□□□□ -0.13
SSX2IP-209ENST00000603677 IGKV2D-28P01615 120 aa14.23□□□□□ -0.13
SSX2IP-209ENST00000603677 UBE2AP49459 152 aa14.23□□□□□ -0.13
SSX2IP-209ENST00000603677 J3QQQ9 107 aa14.22□□□□□ -0.13
SSX2IP-209ENST00000603677 SCO1O75880 301 aa14.22□□□□□ -0.13
SSX2IP-209ENST00000603677 LOC107984156A0A0G2JMH3 177 aa14.21□□□□□ -0.13
SSX2IP-209ENST00000603677 ARL17AQ8IVW1 177 aa14.21□□□□□ -0.13
SSX2IP-209ENST00000603677 MIR7-3HGQ8N6C7 128 aa14.21□□□□□ -0.13
SSX2IP-209ENST00000603677 TMEM126AQ9H061 195 aa14.21□□□□□ -0.13
SSX2IP-209ENST00000603677 COA6Q5JTJ3 125 aaKnown RBP14.2□□□□□ -0.14
SSX2IP-209ENST00000603677 SYS1-DBNDD2H3BUS1 97 aa14.19□□□□□ -0.14
SSX2IP-209ENST00000603677 A0A0U1RRA0 63 aa14.18□□□□□ -0.14
SSX2IP-209ENST00000603677 LGALS3P17931 250 aaKnown RBP14.18□□□□□ -0.14
SSX2IP-209ENST00000603677 BOD1L2Q8IYS8 172 aa14.18□□□□□ -0.14
SSX2IP-209ENST00000603677 PET117Q6UWS5 81 aa14.17□□□□□ -0.14
SSX2IP-209ENST00000603677 Q8NDZ9 215 aa14.17□□□□□ -0.14
SSX2IP-209ENST00000603677 E9PLD3 99 aa14.16□□□□□ -0.14
SSX2IP-209ENST00000603677 TSPEAR-AS2P59090 65 aa14.16□□□□□ -0.14
SSX2IP-209ENST00000603677 PMCHL2Q9BQD1 86 aa14.16□□□□□ -0.14
SSX2IP-209ENST00000603677 CRYGAP11844 174 aa14.14□□□□□ -0.15
SSX2IP-209ENST00000603677 FAM229BQ4G0N7 80 aa14.14□□□□□ -0.15
SSX2IP-209ENST00000603677 LINC01545Q5VT33 79 aa14.14□□□□□ -0.15
SSX2IP-209ENST00000603677 FAM19A1Q7Z5A9 133 aa14.14□□□□□ -0.15
SSX2IP-209ENST00000603677 S100A12P80511 92 aa14.13□□□□□ -0.15
SSX2IP-209ENST00000603677 PRYO14603 147 aa14.12□□□□□ -0.15
SSX2IP-209ENST00000603677 KCNQ1DNQ9H478 68 aa14.12□□□□□ -0.15
SSX2IP-209ENST00000603677 TRBV10-2A0A0K0K1G8 114 aa14.11□□□□□ -0.15
SSX2IP-209ENST00000603677 TMEM238C9JI98 176 aa14.11□□□□□ -0.15
SSX2IP-209ENST00000603677 AKR1D1P51857 326 aa14.1□□□□□ -0.15
SSX2IP-209ENST00000603677 MIEN1Q9BRT3 115 aa14.1□□□□□ -0.15
SSX2IP-209ENST00000603677 NDUFC2O95298 119 aa14.09□□□□□ -0.15
SSX2IP-209ENST00000603677 LINC00337Q8N6G1 96 aa14.09□□□□□ -0.15
SSX2IP-209ENST00000603677 S100A1P23297 94 aa14.07□□□□□ -0.16
SSX2IP-209ENST00000603677 SPRR1AP35321 89 aa14.07□□□□□ -0.16
SSX2IP-209ENST00000603677 CTAG1AP78358 180 aa14.06□□□□□ -0.16
SSX2IP-209ENST00000603677 PRLHP81277 87 aa14.06□□□□□ -0.16
SSX2IP-209ENST00000603677 TYMSOSQ8TAI1 123 aa14.05□□□□□ -0.16
SSX2IP-209ENST00000603677 SPANXB1Q9NS25 103 aaPredicted RBP14.05□□□□□ -0.16
SSX2IP-209ENST00000603677 A0A087X002 238 aa14.04□□□□□ -0.16
SSX2IP-209ENST00000603677 A0A0J9YXY3 114 aa14.04□□□□□ -0.16
SSX2IP-209ENST00000603677 C3orf79P0CE67 100 aa14.04□□□□□ -0.16
SSX2IP-209ENST00000603677 NCR3O14931 201 aa14.03□□□□□ -0.16
SSX2IP-209ENST00000603677 TIMM17BO60830 172 aa14.03□□□□□ -0.16
SSX2IP-209ENST00000603677 CBY1Q9Y3M2 126 aa14.03□□□□□ -0.16
SSX2IP-209ENST00000603677 C20orf202A1L168 122 aa14.02□□□□□ -0.17
SSX2IP-209ENST00000603677 DAND5Q8N907 189 aa14.02□□□□□ -0.17
SSX2IP-209ENST00000603677 ZNF706Q9Y5V0 76 aaPredicted RBP14.02□□□□□ -0.17
SSX2IP-209ENST00000603677 TRBV10-3A0A0K0K1G6 114 aa14.01□□□□□ -0.17
SSX2IP-209ENST00000603677 KRTAP4-16G5E9R7 235 aaPredicted RBP14□□□□□ -0.17
SSX2IP-209ENST00000603677 ETDCA0A1B0GVM5 59 aa13.99□□□□□ -0.17
SSX2IP-209ENST00000603677 DDTP30046 118 aa13.99□□□□□ -0.17
SSX2IP-209ENST00000603677 HIGD2AQ9BW72 106 aa13.99□□□□□ -0.17
SSX2IP-209ENST00000603677 KRTDAPP60985 99 aa13.97□□□□□ -0.17
SSX2IP-209ENST00000603677 IGLV6-57P01721 117 aa13.96□□□□□ -0.17
SSX2IP-209ENST00000603677 S100A7L2Q5SY68 101 aa13.95□□□□□ -0.18
SSX2IP-209ENST00000603677 ADAMTSL4-AS1Q5T5F5 129 aa13.95□□□□□ -0.18
SSX2IP-209ENST00000603677 ZNF815PA8K554 130 aa13.94□□□□□ -0.18
SSX2IP-209ENST00000603677 KRTAP13-2Q52LG2 175 aa13.94□□□□□ -0.18
SSX2IP-209ENST00000603677 UBR4Q5T4S7 5183 aa13.94□□□□□ -0.18
SSX2IP-209ENST00000603677 SNRPEP62304 92 aaKnown RBP13.93□□□□□ -0.18
SSX2IP-209ENST00000603677 SPRR4Q96PI1 79 aa13.93□□□□□ -0.18
SSX2IP-209ENST00000603677 LITAFQ99732 161 aa13.93□□□□□ -0.18
SSX2IP-209ENST00000603677 SPANXCQ9NY87 97 aa13.93□□□□□ -0.18
SSX2IP-209ENST00000603677 ANAPC11Q9NYG5 84 aa13.93□□□□□ -0.18
SSX2IP-209ENST00000603677 LRP2P98164 4655 aa13.93□□□□□ -0.18
SSX2IP-209ENST00000603677 SOSTDC1Q6X4U4 206 aa13.91□□□□□ -0.18
SSX2IP-209ENST00000603677 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
SSX2IP-209ENST00000603677 COPS9Q8WXC6 57 aa13.91□□□□□ -0.18
SSX2IP-209ENST00000603677 B5MCH6 92 aa13.9□□□□□ -0.18
SSX2IP-209ENST00000603677 JOSD1Q15040 202 aaPredicted RBP13.9□□□□□ -0.18
SSX2IP-209ENST00000603677 PPDPFQ9H3Y8 114 aa13.9□□□□□ -0.18
SSX2IP-209ENST00000603677 SMCR5Q8TEV8 140 aa13.89□□□□□ -0.19
SSX2IP-209ENST00000603677 Q6ZRX8 168 aa13.88□□□□□ -0.19
SSX2IP-209ENST00000603677 LINC00518Q8N0U6 118 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms