RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	CD164L2	Q6UWJ8	174 aa		10.54	□□□□□ -0.72
CELF4-223	ENST00000603232	CRYGA	P11844	174 aa		10.54	□□□□□ -0.72
CELF4-223	ENST00000603232	KIAA0087	Q14695	138 aa		10.54	□□□□□ -0.72
CELF4-223	ENST00000603232	ORMDL1	Q9P0S3	153 aa		10.54	□□□□□ -0.72
CELF4-223	ENST00000603232	OR13C6P	Q8NH95	151 aa		10.53	□□□□□ -0.72
CELF4-223	ENST00000603232	MUC7	Q8TAX7	377 aa		10.53	□□□□□ -0.72
CELF4-223	ENST00000603232	C14orf132	Q9NPU4	83 aa		10.53	□□□□□ -0.72
CELF4-223	ENST00000603232	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.53	□□□□□ -0.72
CELF4-223	ENST00000603232	LINC00846	Q9NV44	126 aa		10.52	□□□□□ -0.72
CELF4-223	ENST00000603232	ATOX1	O00244	68 aa		10.52	□□□□□ -0.73
CELF4-223	ENST00000603232	B9D2	Q9BPU9	175 aa		10.52	□□□□□ -0.73
CELF4-223	ENST00000603232	NANOS2	P60321	138 aa	Known RBP	10.51	□□□□□ -0.73
CELF4-223	ENST00000603232	TG	P01266	2768 aa		10.51	□□□□□ -0.73
CELF4-223	ENST00000603232	RPL18A	Q02543	176 aa	Known RBP	10.5	□□□□□ -0.73
CELF4-223	ENST00000603232	JMJD7-PLA2G4B	H0Y9G9	81 aa		10.49	□□□□□ -0.73
CELF4-223	ENST00000603232	TM2D3	Q9BRN9	247 aa		10.49	□□□□□ -0.73
CELF4-223	ENST00000603232	NCR3	O14931	201 aa		10.48	□□□□□ -0.73
CELF4-223	ENST00000603232	CFAP161	Q6P656	301 aa		10.48	□□□□□ -0.73
CELF4-223	ENST00000603232		Q8N814	137 aa		10.48	□□□□□ -0.73
CELF4-223	ENST00000603232	C11orf68	Q9H3H3	251 aa	Known RBP	10.48	□□□□□ -0.73
CELF4-223	ENST00000603232	TMEM256-PLSCR3	K7ERE1	68 aa		10.47	□□□□□ -0.73
CELF4-223	ENST00000603232	LINC00269	Q8N2A0	174 aa		10.47	□□□□□ -0.73
CELF4-223	ENST00000603232	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.47	□□□□□ -0.73
CELF4-223	ENST00000603232	STAB2	Q8WWQ8	2551 aa		10.47	□□□□□ -0.73
CELF4-223	ENST00000603232	IGKV3D-7	A0A0C4DH55	119 aa		10.46	□□□□□ -0.73
CELF4-223	ENST00000603232	SLPI	P03973	132 aa		10.46	□□□□□ -0.73
CELF4-223	ENST00000603232	CCK	P06307	115 aa		10.46	□□□□□ -0.73
CELF4-223	ENST00000603232	UPK3B	Q9BT76	320 aa		10.46	□□□□□ -0.73
CELF4-223	ENST00000603232	DEFB4A	O15263	64 aa		10.46	□□□□□ -0.74
CELF4-223	ENST00000603232	REG3A	Q06141	175 aa		10.46	□□□□□ -0.74
CELF4-223	ENST00000603232	S100A7L2	Q5SY68	101 aa		10.45	□□□□□ -0.74
CELF4-223	ENST00000603232	CLPSL2	Q6UWE3	100 aa		10.45	□□□□□ -0.74
CELF4-223	ENST00000603232	CYSTM1	Q9H1C7	97 aa		10.45	□□□□□ -0.74
CELF4-223	ENST00000603232	RPS28	P62857	69 aa	Known RBP	10.44	□□□□□ -0.74
CELF4-223	ENST00000603232	SERP2	Q8N6R1	65 aa		10.43	□□□□□ -0.74
CELF4-223	ENST00000603232	hADV29S1	A0JD25	119 aa		10.43	□□□□□ -0.74
CELF4-223	ENST00000603232	ANG	P03950	147 aa	Known RBP	10.43	□□□□□ -0.74
CELF4-223	ENST00000603232		A0A096LPF7	62 aa		10.42	□□□□□ -0.74
CELF4-223	ENST00000603232		A0A0J9YWU9	116 aa		10.42	□□□□□ -0.74
CELF4-223	ENST00000603232	LOC107984640	A0A0U1RRK4	108 aa		10.42	□□□□□ -0.74
CELF4-223	ENST00000603232	ATP5EP2	Q5VTU8	51 aa		10.42	□□□□□ -0.74
CELF4-223	ENST00000603232		Q8NAQ8	132 aa		10.42	□□□□□ -0.74
CELF4-223	ENST00000603232		A0A087WVE0	104 aa		10.41	□□□□□ -0.74
CELF4-223	ENST00000603232	LYPD5	Q6UWN5	251 aa		10.41	□□□□□ -0.74
CELF4-223	ENST00000603232	MIF	P14174	115 aa		10.41	□□□□□ -0.74
CELF4-223	ENST00000603232	USP17L23	D6RBM5	183 aa		10.4	□□□□□ -0.74
CELF4-223	ENST00000603232		J3KT08	172 aa		10.4	□□□□□ -0.74
CELF4-223	ENST00000603232	DAD1	P61803	113 aa		10.4	□□□□□ -0.74
CELF4-223	ENST00000603232	PRR3	P79522	188 aa	Known RBP	10.4	□□□□□ -0.74
CELF4-223	ENST00000603232	LELP1	Q5T871	98 aa		10.4	□□□□□ -0.74
CELF4-223	ENST00000603232	PRR34	Q9NV39	138 aa		10.4	□□□□□ -0.74
CELF4-223	ENST00000603232	LINC00575	Q6W349	94 aa		10.39	□□□□□ -0.75
CELF4-223	ENST00000603232	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.39	□□□□□ -0.75
CELF4-223	ENST00000603232		H3BQ85	93 aa		10.38	□□□□□ -0.75
CELF4-223	ENST00000603232	C6orf99	Q4VX62	202 aa		10.38	□□□□□ -0.75
CELF4-223	ENST00000603232	CELA1	Q9UNI1	258 aa		10.37	□□□□□ -0.75
CELF4-223	ENST00000603232	IGLV10-54	A0A075B6I4	117 aa		10.37	□□□□□ -0.75
CELF4-223	ENST00000603232	TRBV10-3	A0A0K0K1G6	114 aa		10.37	□□□□□ -0.75
CELF4-223	ENST00000603232		Q8NDZ9	215 aa		10.37	□□□□□ -0.75
CELF4-223	ENST00000603232	IGLV6-57	P01721	117 aa		10.36	□□□□□ -0.75
CELF4-223	ENST00000603232	SPAG11B	Q08648	103 aa		10.36	□□□□□ -0.75
CELF4-223	ENST00000603232	C9orf116	Q5BN46	136 aa	Predicted RBP	10.36	□□□□□ -0.75
CELF4-223	ENST00000603232	TMEM258	P61165	79 aa		10.35	□□□□□ -0.75
CELF4-223	ENST00000603232		Q8N3U1	123 aa		10.35	□□□□□ -0.75
CELF4-223	ENST00000603232	SPART-AS1	P0CW21	52 aa		10.35	□□□□□ -0.75
CELF4-223	ENST00000603232	LOC110117498	A0A087WWA1	95 aa		10.34	□□□□□ -0.75
CELF4-223	ENST00000603232	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.34	□□□□□ -0.75
CELF4-223	ENST00000603232	DPH3	Q96FX2	82 aa		10.34	□□□□□ -0.75
CELF4-223	ENST00000603232	DNAH7	Q8WXX0	4024 aa		10.34	□□□□□ -0.75
CELF4-223	ENST00000603232	ZNF561-AS1	K7EIQ3	104 aa		10.33	□□□□□ -0.76
CELF4-223	ENST00000603232	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.33	□□□□□ -0.76
CELF4-223	ENST00000603232	C10orf25	Q5T742	122 aa		10.33	□□□□□ -0.76
CELF4-223	ENST00000603232	C6orf223	Q8N319	242 aa		10.33	□□□□□ -0.76
CELF4-223	ENST00000603232	PDE6G	P18545	87 aa		10.3	□□□□□ -0.76
CELF4-223	ENST00000603232	RBM3	P98179	157 aa	Known RBP	10.3	□□□□□ -0.76
CELF4-223	ENST00000603232	ENHO	Q6UWT2	76 aa		10.3	□□□□□ -0.76
CELF4-223	ENST00000603232		Q6ZQT0	140 aa		10.3	□□□□□ -0.76
CELF4-223	ENST00000603232	UBL5	Q9BZL1	73 aa		10.3	□□□□□ -0.76
CELF4-223	ENST00000603232	FAM19A1	Q7Z5A9	133 aa		10.29	□□□□□ -0.76
CELF4-223	ENST00000603232	CSMD3	Q7Z407	3707 aa		10.29	□□□□□ -0.76
CELF4-223	ENST00000603232	OXT	P01178	125 aa		10.29	□□□□□ -0.76
CELF4-223	ENST00000603232	KLK12	Q9UKR0	248 aa		10.28	□□□□□ -0.76
CELF4-223	ENST00000603232	TRBV7-6	A0A0J9YX20	115 aa		10.27	□□□□□ -0.76
CELF4-223	ENST00000603232		H3BNG1	76 aa		10.27	□□□□□ -0.76
CELF4-223	ENST00000603232	GHRH	P01286	108 aa		10.27	□□□□□ -0.76
CELF4-223	ENST00000603232	C11orf45	Q8TAV5	145 aa		10.27	□□□□□ -0.76
CELF4-223	ENST00000603232	BCE1	O60756	84 aa		10.27	□□□□□ -0.77
CELF4-223	ENST00000603232		Q6ZTC4	211 aa		10.27	□□□□□ -0.77
CELF4-223	ENST00000603232	C6orf48	Q9UBA6	75 aa		10.26	□□□□□ -0.77
CELF4-223	ENST00000603232	NDUFC2-KCTD14	E9PQ53	114 aa		10.25	□□□□□ -0.77
CELF4-223	ENST00000603232	DIRC1	Q969H9	104 aa		10.25	□□□□□ -0.77
CELF4-223	ENST00000603232	TRAV23DV6	A0A075B6W5	121 aa		10.24	□□□□□ -0.77
CELF4-223	ENST00000603232	HTN3	P15516	51 aa		10.24	□□□□□ -0.77
CELF4-223	ENST00000603232	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	10.24	□□□□□ -0.77
CELF4-223	ENST00000603232	C5orf47	Q569G3	176 aa		10.23	□□□□□ -0.77
CELF4-223	ENST00000603232	DSCR8	Q96T75	97 aa		10.23	□□□□□ -0.77
CELF4-223	ENST00000603232	LAMTOR3	Q9UHA4	124 aa		10.23	□□□□□ -0.77
CELF4-223	ENST00000603232		Q6ZQY7	126 aa		10.22	□□□□□ -0.77
CELF4-223	ENST00000603232	STARD9	Q9P2P6	4700 aa		10.22	□□□□□ -0.77
CELF4-223	ENST00000603232		M0R2N4	97 aa		10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms