RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 LINC00846Q9NV44 126 aa0.69□□□□□ -2.3
UBE2E3-212ENST00000602888 HILPDAQ9Y5L2 63 aa0.69□□□□□ -2.3
UBE2E3-212ENST00000602888 DIP2AQ14689 1571 aa0.69□□□□□ -2.3
UBE2E3-212ENST00000602888 HFM1A2PYH4 1435 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 UMAD1C9J7I0 102 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 SMIM13P0DJ93 91 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 GCHFRP30047 84 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 HAMPP81172 84 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 DDX60LQ5H9U9 1706 aaKnown RBP0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 TMEM263Q8WUH6 116 aaKnown RBP0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 SMIM4Q8WVI0 70 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 ALS2Q96Q42 1657 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 URB2Q14146 1524 aaKnown RBP0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 TULP4Q9NRJ4 1543 aa0.68□□□□□ -2.3
UBE2E3-212ENST00000602888 NKTRP30414 1462 aaKnown RBP0.67□□□□□ -2.3
UBE2E3-212ENST00000602888 LRRC37AA6NMS7 1700 aa0.67□□□□□ -2.3
UBE2E3-212ENST00000602888 ERCC6L2Q5T890 1561 aa0.67□□□□□ -2.3
UBE2E3-212ENST00000602888 LINC00959A0A1B0GUT2 108 aa0.67□□□□□ -2.3
UBE2E3-212ENST00000602888 HMGN3Q15651 99 aa0.67□□□□□ -2.3
UBE2E3-212ENST00000602888 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
UBE2E3-212ENST00000602888 LY75O60449 1722 aa0.67□□□□□ -2.3
UBE2E3-212ENST00000602888 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
UBE2E3-212ENST00000602888 PLXNC1O60486 1568 aa0.66□□□□□ -2.3
UBE2E3-212ENST00000602888 CROCC2H7BZ55 1655 aa0.66□□□□□ -2.3
UBE2E3-212ENST00000602888 HMGA1P17096 107 aaKnown RBP0.66□□□□□ -2.3
UBE2E3-212ENST00000602888 GNGT1P63211 74 aa0.66□□□□□ -2.3
UBE2E3-212ENST00000602888 SPINK13Q1W4C9 94 aa0.66□□□□□ -2.3
UBE2E3-212ENST00000602888 RALGAPBQ86X10 1494 aa0.66□□□□□ -2.3
UBE2E3-212ENST00000602888 ZDBF2Q9HCK1 2354 aa0.65□□□□□ -2.3
UBE2E3-212ENST00000602888 TRAV21A0A0B4J279 112 aa0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 TRBV6-1A0A0K0K1D8 114 aa0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 A0A1B0GU69 56 aa0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 A0A1B0GUT8 65 aa0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 IFI6P09912 130 aa0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 SSBP3-AS1Q7Z2R9 100 aa0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 NWD1Q149M9 1564 aa0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 TNRC6CQ9HCJ0 1690 aaKnown RBP0.65□□□□□ -2.31
UBE2E3-212ENST00000602888 RNF17Q9BXT8 1623 aaKnown RBP0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 C4AP0C0L4 1744 aa0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 C4BP0C0L5 1744 aa0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 ASXL3Q9C0F0 2248 aa0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 H3BVH4 76 aa0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 DEFB112Q30KQ8 113 aa0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 CRIPTQ9P021 101 aa0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 ANKRD36CQ5JPF3 1778 aa0.64□□□□□ -2.31
UBE2E3-212ENST00000602888 A0A1B0GUL6 1792 aa0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 C3P01024 1663 aa0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 A0A087WXM4 84 aa0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 FXYD6-FXYD2A0A087WZ82 144 aa0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 COX8AP10176 69 aa0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 IFI27P40305 119 aaPredicted RBP0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 ATP5EP2Q5VTU8 51 aa0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 UBE2DNLQ8IWF7 75 aa0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 URB1O60287 2271 aaKnown RBP0.63□□□□□ -2.31
UBE2E3-212ENST00000602888 TOGARAM1Q9Y4F4 1720 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 A0A087WWC5 75 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 A0A0D9SG42 100 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 I3L2K1 104 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 C3orf79P0CE67 100 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 NREPQ16612 68 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 WFDC9Q8NEX5 89 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 S100ZQ8WXG8 99 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 ABCC6O95255 1503 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 ABCA10Q8WWZ4 1543 aa0.62□□□□□ -2.31
UBE2E3-212ENST00000602888 KNTC1P50748 2209 aa0.61□□□□□ -2.31
UBE2E3-212ENST00000602888 LCE6AA0A183 80 aa0.61□□□□□ -2.31
UBE2E3-212ENST00000602888 PIN1P1O15428 100 aa0.61□□□□□ -2.31
UBE2E3-212ENST00000602888 SFTA3P0C7M3 94 aa0.61□□□□□ -2.31
UBE2E3-212ENST00000602888 GAFA1Q96PS6 74 aa0.61□□□□□ -2.31
UBE2E3-212ENST00000602888 MAST1Q9Y2H9 1570 aa0.61□□□□□ -2.31
UBE2E3-212ENST00000602888 PRXQ9BXM0 1461 aa0.61□□□□□ -2.31
UBE2E3-212ENST00000602888 COX7BP24311 80 aa0.6□□□□□ -2.31
UBE2E3-212ENST00000602888 FAM103A1Q9BTL3 118 aaKnown RBP0.6□□□□□ -2.31
UBE2E3-212ENST00000602888 BIVM-ERCC5R4GMW8 1640 aa0.6□□□□□ -2.31
UBE2E3-212ENST00000602888 UGGT1Q9NYU2 1555 aa0.59□□□□□ -2.31
UBE2E3-212ENST00000602888 A0A0D9SFI3 127 aa0.59□□□□□ -2.31
UBE2E3-212ENST00000602888 SYCP2Q9BX26 1530 aa0.59□□□□□ -2.32
UBE2E3-212ENST00000602888 ANKRD50Q9ULJ7 1429 aa0.58□□□□□ -2.32
UBE2E3-212ENST00000602888 NRXN3Q9Y4C0 1643 aa0.58□□□□□ -2.32
UBE2E3-212ENST00000602888 K7EQZ3 153 aa0.58□□□□□ -2.32
UBE2E3-212ENST00000602888 TP53AIP1Q9HCN2 124 aa0.58□□□□□ -2.32
UBE2E3-212ENST00000602888 GNG13Q9P2W3 67 aa0.58□□□□□ -2.32
UBE2E3-212ENST00000602888 NDUFB1O75438 58 aa0.57□□□□□ -2.32
UBE2E3-212ENST00000602888 ATXN8Q156A1 80 aa0.57□□□□□ -2.32
UBE2E3-212ENST00000602888 SPINK9Q5DT21 86 aa0.57□□□□□ -2.32
UBE2E3-212ENST00000602888 LELP1Q5T871 98 aa0.57□□□□□ -2.32
UBE2E3-212ENST00000602888 NAV3Q8IVL0 2385 aa0.57□□□□□ -2.32
UBE2E3-212ENST00000602888 CLASP1Q7Z460 1538 aa0.57□□□□□ -2.32
UBE2E3-212ENST00000602888 ASH1LQ9NR48 2969 aaKnown RBP0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 LINC01549A6NIU2 74 aa0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 NDUFA4O00483 81 aa0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 ENHOQ6UWT2 76 aa0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 DEFB123Q8N688 67 aa0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 CNFNQ9BYD5 112 aa0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 PRO0255Q9UI72 69 aa0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 JMJD1CQ15652 2540 aa0.56□□□□□ -2.32
UBE2E3-212ENST00000602888 EEA1Q15075 1411 aa0.55□□□□□ -2.32
UBE2E3-212ENST00000602888 SPTY2D1-AS1A0A0U1RR47 76 aa0.55□□□□□ -2.32
UBE2E3-212ENST00000602888 CPSF4LA6NMK7 179 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms