RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TYMSOSQ8TAI1 123 aa12.49□□□□□ -0.41
PPFIA3-209ENST00000602783 HSBP1O75506 76 aa12.48□□□□□ -0.41
PPFIA3-209ENST00000602783 ANAPC11Q9NYG5 84 aa12.48□□□□□ -0.41
PPFIA3-209ENST00000602783 FAM19A2Q8N3H0 131 aa12.47□□□□□ -0.41
PPFIA3-209ENST00000602783 TMEM238C9JI98 176 aa12.46□□□□□ -0.41
PPFIA3-209ENST00000602783 LINC00158P58513 81 aa12.46□□□□□ -0.41
PPFIA3-209ENST00000602783 TMEM126AQ9H061 195 aa12.46□□□□□ -0.41
PPFIA3-209ENST00000602783 PRLHP81277 87 aa12.45□□□□□ -0.42
PPFIA3-209ENST00000602783 A0A0U1RRA0 63 aa12.44□□□□□ -0.42
PPFIA3-209ENST00000602783 TRGC2P03986 189 aa12.44□□□□□ -0.42
PPFIA3-209ENST00000602783 FAM19A1Q7Z5A9 133 aa12.44□□□□□ -0.42
PPFIA3-209ENST00000602783 MUC2Q02817 5179 aa12.43□□□□□ -0.42
PPFIA3-209ENST00000602783 H0Y8G0 127 aa12.42□□□□□ -0.42
PPFIA3-209ENST00000602783 M0R378 163 aa12.42□□□□□ -0.42
PPFIA3-209ENST00000602783 SLC7A5P1Q8MH63 180 aa12.42□□□□□ -0.42
PPFIA3-209ENST00000602783 SMIM13P0DJ93 91 aa12.4□□□□□ -0.42
PPFIA3-209ENST00000602783 LINC00310P59036 64 aa12.4□□□□□ -0.42
PPFIA3-209ENST00000602783 KRTAP13-2Q52LG2 175 aa12.4□□□□□ -0.42
PPFIA3-209ENST00000602783 SERF1AO75920 110 aa12.39□□□□□ -0.43
PPFIA3-209ENST00000602783 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
PPFIA3-209ENST00000602783 LEPROTL1O95214 131 aa12.38□□□□□ -0.43
PPFIA3-209ENST00000602783 FAM229BQ4G0N7 80 aa12.38□□□□□ -0.43
PPFIA3-209ENST00000602783 ATP6V1G1O75348 118 aa12.37□□□□□ -0.43
PPFIA3-209ENST00000602783 NDUFA12Q9UI09 145 aa12.37□□□□□ -0.43
PPFIA3-209ENST00000602783 HERV-K104P63124 156 aa12.36□□□□□ -0.43
PPFIA3-209ENST00000602783 MIR7-3HGQ8N6C7 128 aa12.36□□□□□ -0.43
PPFIA3-209ENST00000602783 BOD1L2Q8IYS8 172 aa12.35□□□□□ -0.43
PPFIA3-209ENST00000602783 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
PPFIA3-209ENST00000602783 NCR3O14931 201 aa12.33□□□□□ -0.44
PPFIA3-209ENST00000602783 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
PPFIA3-209ENST00000602783 RETNLBQ9BQ08 111 aa12.33□□□□□ -0.44
PPFIA3-209ENST00000602783 IGKV2D-26A0A0A0MRZ7 120 aa12.32□□□□□ -0.44
PPFIA3-209ENST00000602783 MYMXA0A1B0GTQ4 84 aa12.32□□□□□ -0.44
PPFIA3-209ENST00000602783 HIGD2AQ9BW72 106 aa12.32□□□□□ -0.44
PPFIA3-209ENST00000602783 A0A0U1RQV1 116 aa12.31□□□□□ -0.44
PPFIA3-209ENST00000602783 PLNP26678 52 aa12.31□□□□□ -0.44
PPFIA3-209ENST00000602783 PLEKHB2Q96CS7 222 aa12.31□□□□□ -0.44
PPFIA3-209ENST00000602783 HSPB8Q9UJY1 196 aa12.31□□□□□ -0.44
PPFIA3-209ENST00000602783 COLCA2A8K830 154 aa12.3□□□□□ -0.44
PPFIA3-209ENST00000602783 LINC00587B1AMM8 73 aa12.3□□□□□ -0.44
PPFIA3-209ENST00000602783 PRYO14603 147 aa12.3□□□□□ -0.44
PPFIA3-209ENST00000602783 LEPROTO15243 131 aa12.3□□□□□ -0.44
PPFIA3-209ENST00000602783 FABP4P15090 132 aa12.3□□□□□ -0.44
PPFIA3-209ENST00000602783 PMCHL2Q9BQD1 86 aa12.29□□□□□ -0.44
PPFIA3-209ENST00000602783 MAP1LC3CQ9BXW4 147 aa12.29□□□□□ -0.44
PPFIA3-209ENST00000602783 DPM2O94777 84 aa12.28□□□□□ -0.44
PPFIA3-209ENST00000602783 J3QQQ9 107 aa12.26□□□□□ -0.45
PPFIA3-209ENST00000602783 HERVK_113P61574 105 aa12.26□□□□□ -0.45
PPFIA3-209ENST00000602783 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
PPFIA3-209ENST00000602783 DAND5Q8N907 189 aa12.26□□□□□ -0.45
PPFIA3-209ENST00000602783 IGKCP01834 107 aa12.25□□□□□ -0.45
PPFIA3-209ENST00000602783 SPRR4Q96PI1 79 aa12.25□□□□□ -0.45
PPFIA3-209ENST00000602783 KCNQ1DNQ9H478 68 aa12.25□□□□□ -0.45
PPFIA3-209ENST00000602783 TRBV10-3A0A0K0K1G6 114 aa12.24□□□□□ -0.45
PPFIA3-209ENST00000602783 SPRR1AP35321 89 aa12.24□□□□□ -0.45
PPFIA3-209ENST00000602783 LINC00337Q8N6G1 96 aa12.24□□□□□ -0.45
PPFIA3-209ENST00000602783 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
PPFIA3-209ENST00000602783 NMUP48645 174 aa12.22□□□□□ -0.45
PPFIA3-209ENST00000602783 ZNF706Q9Y5V0 76 aaPredicted RBP12.22□□□□□ -0.45
PPFIA3-209ENST00000602783 IGLV7-46A0A075B6I9 117 aa12.21□□□□□ -0.45
PPFIA3-209ENST00000602783 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.45
PPFIA3-209ENST00000602783 KRTAP4-16G5E9R7 235 aaPredicted RBP12.21□□□□□ -0.45
PPFIA3-209ENST00000602783 CTAG1AP78358 180 aa12.21□□□□□ -0.45
PPFIA3-209ENST00000602783 CDIP1Q9H305 208 aa12.21□□□□□ -0.45
PPFIA3-209ENST00000602783 LOC107984156A0A0G2JMH3 177 aa12.2□□□□□ -0.46
PPFIA3-209ENST00000602783 S100A1P23297 94 aa12.2□□□□□ -0.46
PPFIA3-209ENST00000602783 ARL17AQ8IVW1 177 aa12.2□□□□□ -0.46
PPFIA3-209ENST00000602783 TPRXLQ17RH7 258 aa12.19□□□□□ -0.46
PPFIA3-209ENST00000602783 S100A12P80511 92 aa12.18□□□□□ -0.46
PPFIA3-209ENST00000602783 MIEN1Q9BRT3 115 aa12.18□□□□□ -0.46
PPFIA3-209ENST00000602783 FAT4Q6V0I7 4981 aa12.17□□□□□ -0.46
PPFIA3-209ENST00000602783 TRBV10-2A0A0K0K1G8 114 aa12.17□□□□□ -0.46
PPFIA3-209ENST00000602783 DDTP30046 118 aa12.17□□□□□ -0.46
PPFIA3-209ENST00000602783 SMCR5Q8TEV8 140 aa12.17□□□□□ -0.46
PPFIA3-209ENST00000602783 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
PPFIA3-209ENST00000602783 B5MCH6 92 aa12.14□□□□□ -0.47
PPFIA3-209ENST00000602783 E9PLD3 99 aa12.14□□□□□ -0.47
PPFIA3-209ENST00000602783 SPAG11AQ6PDA7 123 aa12.14□□□□□ -0.47
PPFIA3-209ENST00000602783 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
PPFIA3-209ENST00000602783 MUC17Q685J3 4493 aa12.13□□□□□ -0.47
PPFIA3-209ENST00000602783 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
PPFIA3-209ENST00000602783 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
PPFIA3-209ENST00000602783 NPC2P61916 151 aa12.13□□□□□ -0.47
PPFIA3-209ENST00000602783 NDUFC2O95298 119 aa12.12□□□□□ -0.47
PPFIA3-209ENST00000602783 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
PPFIA3-209ENST00000602783 C4orf48Q5BLP8 95 aa12.11□□□□□ -0.47
PPFIA3-209ENST00000602783 LINC00483Q53H64 154 aa12.1□□□□□ -0.47
PPFIA3-209ENST00000602783 S100A7L2Q5SY68 101 aa12.1□□□□□ -0.47
PPFIA3-209ENST00000602783 ADAMTSL4-AS1Q5T5F5 129 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms