RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RAB37Q96AX2 223 aa14.56□□□□□ -0.08
IRF3-228ENST00000601291 A0A0B4J2C4 111 aa14.56□□□□□ -0.08
IRF3-228ENST00000601291 NDUFC2O95298 119 aa14.56□□□□□ -0.08
IRF3-228ENST00000601291 CFC1BP0CG36 223 aa14.56□□□□□ -0.08
IRF3-228ENST00000601291 CFC1P0CG37 223 aa14.56□□□□□ -0.08
IRF3-228ENST00000601291 SACSQ9NZJ4 4579 aa14.55□□□□□ -0.08
IRF3-228ENST00000601291 K7ERJ3 54 aa14.55□□□□□ -0.08
IRF3-228ENST00000601291 LBHQ53QV2 105 aaPredicted RBP14.54□□□□□ -0.08
IRF3-228ENST00000601291 IGLV5-52A0A0A0MRZ9 124 aa14.53□□□□□ -0.08
IRF3-228ENST00000601291 C16orf90A8MZG2 172 aa14.52□□□□□ -0.08
IRF3-228ENST00000601291 C9orf129Q5T035 196 aaKnown RBP14.52□□□□□ -0.08
IRF3-228ENST00000601291 LINC00336Q6ZUF6 198 aa14.51□□□□□ -0.09
IRF3-228ENST00000601291 PRO1854Q9UHT4 67 aa14.51□□□□□ -0.09
IRF3-228ENST00000601291 A0A096LNI7 61 aa14.5□□□□□ -0.09
IRF3-228ENST00000601291 DNAH17Q9UFH2 4485 aa14.5□□□□□ -0.09
IRF3-228ENST00000601291 IGKV2-28A0A075B6P5 120 aa14.48□□□□□ -0.09
IRF3-228ENST00000601291 TRAV13-2A0A0B4J235 113 aa14.48□□□□□ -0.09
IRF3-228ENST00000601291 IGKV2D-28P01615 120 aa14.48□□□□□ -0.09
IRF3-228ENST00000601291 LINC01620Q4KN68 170 aa14.48□□□□□ -0.09
IRF3-228ENST00000601291 SDIM1Q6ZPB5 146 aa14.48□□□□□ -0.09
IRF3-228ENST00000601291 IGKV2-24A0A0C4DH68 120 aa14.47□□□□□ -0.09
IRF3-228ENST00000601291 Q8NDZ9 215 aa14.47□□□□□ -0.09
IRF3-228ENST00000601291 LINC00474Q9P2X8 69 aa14.47□□□□□ -0.09
IRF3-228ENST00000601291 PLA2G2DQ9UNK4 145 aa14.47□□□□□ -0.09
IRF3-228ENST00000601291 NCR3O14931 201 aa14.46□□□□□ -0.09
IRF3-228ENST00000601291 VPREB1P12018 145 aa14.46□□□□□ -0.09
IRF3-228ENST00000601291 FUSP35637 526 aaKnown RBP eCLIP14.46□□□□□ -0.09
IRF3-228ENST00000601291 PRR3P79522 188 aaKnown RBP14.45□□□□□ -0.1
IRF3-228ENST00000601291 LINC00337Q8N6G1 96 aa14.45□□□□□ -0.1
IRF3-228ENST00000601291 PGPEP1Q9NXJ5 209 aa14.45□□□□□ -0.1
IRF3-228ENST00000601291 TRBV10-2A0A0K0K1G8 114 aa14.44□□□□□ -0.1
IRF3-228ENST00000601291 TAX1BP3O14907 124 aa14.44□□□□□ -0.1
IRF3-228ENST00000601291 RPL13AP40429 203 aaKnown RBP14.44□□□□□ -0.1
IRF3-228ENST00000601291 NKAPP1Q8N9T2 125 aa14.43□□□□□ -0.1
IRF3-228ENST00000601291 OR13C6PQ8NH95 151 aa14.43□□□□□ -0.1
IRF3-228ENST00000601291 KRTAP10-2P60368 255 aa14.43□□□□□ -0.1
IRF3-228ENST00000601291 FRAS1Q86XX4 4008 aa14.42□□□□□ -0.1
IRF3-228ENST00000601291 H7C2G1 150 aa14.42□□□□□ -0.1
IRF3-228ENST00000601291 Q1RN00 199 aa14.42□□□□□ -0.1
IRF3-228ENST00000601291 SERTAD4-AS1Q5TG53 156 aa14.42□□□□□ -0.1
IRF3-228ENST00000601291 CHTF8P0CG12 524 aa14.41□□□□□ -0.1
IRF3-228ENST00000601291 S100A7L2Q5SY68 101 aa14.41□□□□□ -0.1
IRF3-228ENST00000601291 FAM168BA1KXE4 195 aa14.4□□□□□ -0.1
IRF3-228ENST00000601291 M0R378 163 aa14.4□□□□□ -0.1
IRF3-228ENST00000601291 TSPAN13O95857 204 aa14.4□□□□□ -0.1
IRF3-228ENST00000601291 IGLV5-37A0A075B6J1 123 aa14.39□□□□□ -0.11
IRF3-228ENST00000601291 FAM19A5Q7Z5A7 132 aaPredicted RBP14.39□□□□□ -0.11
IRF3-228ENST00000601291 TMEM126AQ9H061 195 aa14.39□□□□□ -0.11
IRF3-228ENST00000601291 RYR2Q92736 4967 aa14.39□□□□□ -0.11
IRF3-228ENST00000601291 C9orf118A6NHY6 69 aa14.39□□□□□ -0.11
IRF3-228ENST00000601291 H3BUT2 72 aa14.36□□□□□ -0.11
IRF3-228ENST00000601291 SPACA4Q8TDM5 124 aa14.36□□□□□ -0.11
IRF3-228ENST00000601291 KMT2CQ8NEZ4 4911 aaKnown RBP14.36□□□□□ -0.11
IRF3-228ENST00000601291 DPH3Q96FX2 82 aa14.35□□□□□ -0.11
IRF3-228ENST00000601291 NAA38Q9BRA0 125 aaKnown RBP14.34□□□□□ -0.11
IRF3-228ENST00000601291 C22orf24Q9Y442 160 aa14.34□□□□□ -0.11
IRF3-228ENST00000601291 IGLV6-57P01721 117 aa14.34□□□□□ -0.11
IRF3-228ENST00000601291 PSMB2P49721 201 aa14.34□□□□□ -0.11
IRF3-228ENST00000601291 KRTAP7-1Q8IUC3 87 aa14.34□□□□□ -0.11
IRF3-228ENST00000601291 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.34□□□□□ -0.11
IRF3-228ENST00000601291 A0A1W2PNN7 141 aa14.33□□□□□ -0.12
IRF3-228ENST00000601291 M0QXV9 152 aa14.33□□□□□ -0.12
IRF3-228ENST00000601291 C7orf33Q8WU49 177 aa14.33□□□□□ -0.12
IRF3-228ENST00000601291 FAT2Q9NYQ8 4349 aa14.33□□□□□ -0.12
IRF3-228ENST00000601291 TRBV10-3A0A0K0K1G6 114 aa14.32□□□□□ -0.12
IRF3-228ENST00000601291 PANO1I0J062 215 aa14.32□□□□□ -0.12
IRF3-228ENST00000601291 MRPL55Q7Z7F7 128 aaKnown RBP14.32□□□□□ -0.12
IRF3-228ENST00000601291 CBY1Q9Y3M2 126 aa14.32□□□□□ -0.12
IRF3-228ENST00000601291 GAGE10A6NGK3 116 aa14.3□□□□□ -0.12
IRF3-228ENST00000601291 SMIM11BQ8TCY0 68 aa14.3□□□□□ -0.12
IRF3-228ENST00000601291 RPL28P46779 137 aaKnown RBP14.3□□□□□ -0.12
IRF3-228ENST00000601291 A0A1W2PPM0 123 aa14.29□□□□□ -0.12
IRF3-228ENST00000601291 TRIAP1O43715 76 aa14.28□□□□□ -0.12
IRF3-228ENST00000601291 COX6CP09669 75 aa14.28□□□□□ -0.12
IRF3-228ENST00000601291 LYRM7Q5U5X0 104 aa14.28□□□□□ -0.12
IRF3-228ENST00000601291 TRAV23DV6A0A075B6W5 121 aa14.27□□□□□ -0.12
IRF3-228ENST00000601291 A0A1B0GVY2 172 aa14.27□□□□□ -0.12
IRF3-228ENST00000601291 FABP2P12104 132 aa14.27□□□□□ -0.12
IRF3-228ENST00000601291 LINC00167Q96N53 147 aa14.27□□□□□ -0.12
IRF3-228ENST00000601291 DNAH11Q96DT5 4516 aa14.26□□□□□ -0.13
IRF3-228ENST00000601291 A0A087WYN8 130 aa14.26□□□□□ -0.13
IRF3-228ENST00000601291 SCGB1C2P0DMR2 95 aa14.26□□□□□ -0.13
IRF3-228ENST00000601291 HECTD4Q9Y4D8 3996 aa14.24□□□□□ -0.13
IRF3-228ENST00000601291 IGLV1-50A0A075B6I6 118 aa14.24□□□□□ -0.13
IRF3-228ENST00000601291 KRTAP10-1P60331 282 aa14.24□□□□□ -0.13
IRF3-228ENST00000601291 RPL37AP8A6NKH3 93 aa14.23□□□□□ -0.13
IRF3-228ENST00000601291 A0A1B0GV90 55 aa14.22□□□□□ -0.13
IRF3-228ENST00000601291 EPM2AB3EWF7 344 aa14.22□□□□□ -0.13
IRF3-228ENST00000601291 KCNQ1DNQ9H478 68 aa14.22□□□□□ -0.13
IRF3-228ENST00000601291 PLAC8Q9NZF1 115 aa14.22□□□□□ -0.13
IRF3-228ENST00000601291 ZNF73O43830 326 aaPredicted RBP14.22□□□□□ -0.13
IRF3-228ENST00000601291 VAMP3Q15836 100 aa14.22□□□□□ -0.13
IRF3-228ENST00000601291 PHF5AQ7RTV0 110 aaKnown RBP14.22□□□□□ -0.13
IRF3-228ENST00000601291 DIRC1Q969H9 104 aa14.22□□□□□ -0.13
IRF3-228ENST00000601291 PRYO14603 147 aa14.21□□□□□ -0.14
IRF3-228ENST00000601291 UBE2BP63146 152 aa14.21□□□□□ -0.14
IRF3-228ENST00000601291 C6orf99Q4VX62 202 aa14.21□□□□□ -0.14
IRF3-228ENST00000601291 PKD1P98161 4303 aa14.2□□□□□ -0.14
IRF3-228ENST00000601291 Q6ZSA8 131 aa14.19□□□□□ -0.14
IRF3-228ENST00000601291 FAM30AQ9NZY2 134 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms