RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
LIG1-220ENST00000601091 FBN2P35556 2912 aa7.37□□□□□ -1.23
LIG1-220ENST00000601091 CELSR2Q9HCU4 2923 aa7.37□□□□□ -1.23
LIG1-220ENST00000601091 CHD6Q8TD26 2715 aa7.37□□□□□ -1.23
LIG1-220ENST00000601091 VPS13CQ709C8 3753 aa7.37□□□□□ -1.23
LIG1-220ENST00000601091 C14orf132Q9NPU4 83 aa7.36□□□□□ -1.23
LIG1-220ENST00000601091 TRAV7A0A075B6U4 112 aa7.36□□□□□ -1.23
LIG1-220ENST00000601091 EPM2AB3EWF7 344 aa7.36□□□□□ -1.23
LIG1-220ENST00000601091 MIFP14174 115 aa7.36□□□□□ -1.23
LIG1-220ENST00000601091 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
LIG1-220ENST00000601091 UTP20O75691 2785 aaKnown RBP7.36□□□□□ -1.23
LIG1-220ENST00000601091 A6NED7 52 aa7.36□□□□□ -1.23
LIG1-220ENST00000601091 DEFB135Q30KP9 77 aa7.35□□□□□ -1.23
LIG1-220ENST00000601091 DEFB4AO15263 64 aa7.35□□□□□ -1.23
LIG1-220ENST00000601091 SPART-AS1P0CW21 52 aa7.35□□□□□ -1.23
LIG1-220ENST00000601091 LINC00313P59037 77 aa7.34□□□□□ -1.23
LIG1-220ENST00000601091 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
LIG1-220ENST00000601091 IGLV5-39A0A0G2JS06 123 aa7.34□□□□□ -1.24
LIG1-220ENST00000601091 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.24
LIG1-220ENST00000601091 LINC00959A0A1B0GUT2 108 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 IGLV1-51P01701 117 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 DEFB121Q5J5C9 76 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 NF1P21359 2839 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 JMJD7-PLA2G4BH0Y9G9 81 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 IGLV5-45A0A087WSX0 123 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 FSHBP01225 129 aa7.33□□□□□ -1.24
LIG1-220ENST00000601091 CCL18P55774 89 aa7.32□□□□□ -1.24
LIG1-220ENST00000601091 SMIM11BQ8TCY0 68 aa7.32□□□□□ -1.24
LIG1-220ENST00000601091 LINC00846Q9NV44 126 aa7.32□□□□□ -1.24
LIG1-220ENST00000601091 PRYO14603 147 aa7.32□□□□□ -1.24
LIG1-220ENST00000601091 NTM-AS1Q6ZSK4 140 aa7.32□□□□□ -1.24
LIG1-220ENST00000601091 IGLV4-60A0A075B6I1 120 aa7.31□□□□□ -1.24
LIG1-220ENST00000601091 HAMPP81172 84 aa7.31□□□□□ -1.24
LIG1-220ENST00000601091 A8MTW9 85 aa7.31□□□□□ -1.24
LIG1-220ENST00000601091 SPAG11BQ08648 103 aa7.31□□□□□ -1.24
LIG1-220ENST00000601091 LITAFQ99732 161 aa7.31□□□□□ -1.24
LIG1-220ENST00000601091 CHCHD10Q8WYQ3 142 aaPredicted RBP7.31□□□□□ -1.24
LIG1-220ENST00000601091 BBC3Q96PG8 261 aaPredicted RBP7.31□□□□□ -1.24
LIG1-220ENST00000601091 KLK12Q9UKR0 248 aa7.3□□□□□ -1.24
LIG1-220ENST00000601091 A8MU10 97 aa7.3□□□□□ -1.24
LIG1-220ENST00000601091 SLPIP03973 132 aa7.29□□□□□ -1.24
LIG1-220ENST00000601091 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
LIG1-220ENST00000601091 NCR3O14931 201 aa7.29□□□□□ -1.24
LIG1-220ENST00000601091 NIPBLQ6KC79 2804 aaeCLIP7.29□□□□□ -1.24
LIG1-220ENST00000601091 DIRC1Q969H9 104 aa7.28□□□□□ -1.24
LIG1-220ENST00000601091 A0A096LNT2 108 aa7.28□□□□□ -1.24
LIG1-220ENST00000601091 SYCNQ0VAF6 134 aa7.28□□□□□ -1.24
LIG1-220ENST00000601091 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
LIG1-220ENST00000601091 Q8IZM0 81 aa7.27□□□□□ -1.25
LIG1-220ENST00000601091 GCN1Q92616 2671 aaKnown RBP7.27□□□□□ -1.25
LIG1-220ENST00000601091 TEX15Q9BXT5 2789 aa7.27□□□□□ -1.25
LIG1-220ENST00000601091 PLA2G2AP14555 144 aa7.27□□□□□ -1.25
LIG1-220ENST00000601091 ATP11AUNQ6ZP68 121 aa7.27□□□□□ -1.25
LIG1-220ENST00000601091 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
LIG1-220ENST00000601091 RETNLBQ9BQ08 111 aa7.27□□□□□ -1.25
LIG1-220ENST00000601091 CXCL6P80162 114 aa7.26□□□□□ -1.25
LIG1-220ENST00000601091 PRAC1Q96KF2 57 aa7.26□□□□□ -1.25
LIG1-220ENST00000601091 PRR4Q16378 134 aa7.26□□□□□ -1.25
LIG1-220ENST00000601091 IGHV3OR16-9A0A0B4J2B5 98 aa7.25□□□□□ -1.25
LIG1-220ENST00000601091 LINC00337Q8N6G1 96 aa7.25□□□□□ -1.25
LIG1-220ENST00000601091 H3BQ85 93 aa7.24□□□□□ -1.25
LIG1-220ENST00000601091 FAM30AQ9NZY2 134 aa7.24□□□□□ -1.25
LIG1-220ENST00000601091 CFAP46Q8IYW2 2715 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 A0A1B0GUV1 79 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 COX17Q14061 63 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 PRR15LQ9BU68 103 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 MXRA5Q9NR99 2828 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 IGHV4-28A0A0C4DH34 117 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 H0Y9J4 135 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 IGKV2D-24A0A075B6R9 120 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 A0A087WYN8 130 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 TMEM254Q8TBM7 123 aa7.23□□□□□ -1.25
LIG1-220ENST00000601091 PHF5AQ7RTV0 110 aaKnown RBP7.22□□□□□ -1.25
LIG1-220ENST00000601091 F8P00451 2351 aa7.21□□□□□ -1.25
LIG1-220ENST00000601091 C16orf90A8MZG2 172 aa7.21□□□□□ -1.25
LIG1-220ENST00000601091 LINC01600Q96MT4 127 aa7.21□□□□□ -1.25
LIG1-220ENST00000601091 FAM218AQ96MZ4 157 aa7.21□□□□□ -1.25
LIG1-220ENST00000601091 Q6ZRP5 223 aa7.21□□□□□ -1.26
LIG1-220ENST00000601091 PDE6GP18545 87 aa7.2□□□□□ -1.26
LIG1-220ENST00000601091 ATP5EP2Q5VTU8 51 aa7.2□□□□□ -1.26
LIG1-220ENST00000601091 SCXQ7RTU7 201 aa7.2□□□□□ -1.26
LIG1-220ENST00000601091 INAFM1C9JVW0 142 aa7.2□□□□□ -1.26
LIG1-220ENST00000601091 PRR3P79522 188 aaKnown RBP7.2□□□□□ -1.26
LIG1-220ENST00000601091 LELP1Q5T871 98 aa7.2□□□□□ -1.26
LIG1-220ENST00000601091 LY6G6DO95868 133 aa7.19□□□□□ -1.26
LIG1-220ENST00000601091 SMR3AQ99954 134 aa7.19□□□□□ -1.26
LIG1-220ENST00000601091 XAGE1AQ9HD64 81 aa7.19□□□□□ -1.26
LIG1-220ENST00000601091 HIGD2BQ4VC39 106 aa7.18□□□□□ -1.26
LIG1-220ENST00000601091 COX7BP24311 80 aa7.18□□□□□ -1.26
LIG1-220ENST00000601091 C9orf116Q5BN46 136 aaPredicted RBP7.18□□□□□ -1.26
LIG1-220ENST00000601091 MUC7Q8TAX7 377 aa7.18□□□□□ -1.26
LIG1-220ENST00000601091 Q1T7F1 81 aa7.18□□□□□ -1.26
LIG1-220ENST00000601091 UNQ6190/PRO20217Q6UXQ8 127 aa7.18□□□□□ -1.26
LIG1-220ENST00000601091 Q8N814 137 aa7.18□□□□□ -1.26
LIG1-220ENST00000601091 TRAV10A0A0B4J240 114 aa7.17□□□□□ -1.26
LIG1-220ENST00000601091 CYSRT1A8MQ03 144 aa7.17□□□□□ -1.26
LIG1-220ENST00000601091 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
LIG1-220ENST00000601091 FLNAP21333 2647 aaKnown RBP7.17□□□□□ -1.26
LIG1-220ENST00000601091 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms