RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 Q8N8P6 123 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 OR10D4PQ8NGN7 298 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 DPH3Q96FX2 82 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 CARD19Q96LW7 228 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 PRELID3AQ96N28 172 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 SEC11CQ9BY50 192 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 MRPL35Q9NZE8 188 aaKnown RBP2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 FAT3Q8TDW7 4589 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 TMEM218A2RU14 115 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 LINC01549A6NIU2 74 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 IGIPA6NJ69 53 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 MT1HL1P0DM35 61 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 NMUP48645 174 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 PRR3P79522 188 aaKnown RBP2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 IFITM2Q01629 132 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 KIAA0087Q14695 138 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 COX19Q49B96 90 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 ORMDL2Q53FV1 153 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 RNASE13Q5GAN3 156 aaKnown RBP2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 C10orf91Q5T1B1 145 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 Q6ZN92 141 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 C5orf38Q86SI9 138 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 LINC00526Q96FQ7 95 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 TMEM141Q96I45 108 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 CAMK2N2Q96S95 79 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 AMELXQ99217 191 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 MAP1LC3AQ9H492 121 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 NXT2Q9NPJ8 142 aaKnown RBP2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 CYSLTR1Q9Y271 337 aa2.06□□□□□ -2.08
CKS1BP3-201ENST00000600888 MUC2Q02817 5179 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 TGIF2-C20orf24A0A0A6YYL0 155 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 TRBV30A0A0K0K1B3 111 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 A0A1W2PNN7 141 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 LINC01546A6NGU7 62 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 NDUFA1O15239 70 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 ADCYAP1P18509 176 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 UBE2D1P51668 147 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 SEC11AP67812 179 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 SPAG11BQ08648 103 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 SPINK6Q6UWN8 80 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 TEX43Q6ZNM6 134 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 CAMK2N1Q7Z7J9 78 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 ORAOV1Q8WV07 137 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 LINC01600Q96MT4 127 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 TIMM17AQ99595 171 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 GNB1LQ9BYB4 327 aa2.05□□□□□ -2.08
CKS1BP3-201ENST00000600888 RNF213Q63HN8 5207 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 A0A0J9YXV3 536 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 LOC389332A0A1B0GUA5 103 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 MT-ND6P03923 174 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 HERVK_113P63121 156 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 RHEBQ15382 184 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 C9orf116Q5BN46 136 aaPredicted RBP2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 Q8IZM0 81 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 TOMM6Q96B49 74 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 C2orf88Q9BSF0 95 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 GEMIN7Q9H840 131 aaKnown RBP2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 C6orf48Q9UBA6 75 aa2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 CARHSP1Q9Y2V2 147 aaKnown RBP2.04□□□□□ -2.08
CKS1BP3-201ENST00000600888 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 NDUFC2-KCTD14E9PQ53 114 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 ATP5LO75964 103 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 S100PP25815 95 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 CXCL5P42830 114 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 DEFB116Q30KQ4 102 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 UNQ6190/PRO20217Q6UXQ8 127 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 PSORS1C2Q9UIG4 136 aa2.03□□□□□ -2.08
CKS1BP3-201ENST00000600888 TINCRA0A1B0GVN0 87 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 F8VRH5 84 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 RPL13AP40429 203 aaKnown RBP2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 RPL18AQ02543 176 aaKnown RBP2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 PMVKQ15126 192 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 PDZD11Q5EBL8 140 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 C2orf82Q6UX34 121 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 PHF5AQ7RTV0 110 aaKnown RBP2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 COMMD7Q86VX2 200 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 PACRGQ96M98 296 aaPredicted RBP2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 SCGB3A1Q96QR1 104 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 CDKN2A-AS1Q9UH64 79 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 HMCN2Q8NDA2 5059 aa2.02□□□□□ -2.09
CKS1BP3-201ENST00000600888 IGLV7-43P04211 117 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 LINC00614P0C842 121 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 CKS1BP61024 79 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 FABP9Q0Z7S8 132 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 LINC00483Q53H64 154 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 FA2HQ7L5A8 372 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 PCP2Q8IVA1 136 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 C18orf32Q8TCD1 76 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 DIRC1Q969H9 104 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 CST9LQ9H4G1 147 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 TP73-AS1Q9UF72 201 aa2.01□□□□□ -2.09
CKS1BP3-201ENST00000600888 IGLV1-50A0A075B6I6 118 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms