RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PLNP26678 52 aa9.54□□□□□ -0.88
RPS28-203ENST00000600659 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
RPS28-203ENST00000600659 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
RPS28-203ENST00000600659 IGKCP01834 107 aa9.53□□□□□ -0.88
RPS28-203ENST00000600659 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
RPS28-203ENST00000600659 H0Y9J4 135 aa9.52□□□□□ -0.89
RPS28-203ENST00000600659 LEPROTO15243 131 aa9.52□□□□□ -0.89
RPS28-203ENST00000600659 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
RPS28-203ENST00000600659 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.89
RPS28-203ENST00000600659 GAGE10A6NGK3 116 aa9.51□□□□□ -0.89
RPS28-203ENST00000600659 RPL37AP8A6NKH3 93 aa9.51□□□□□ -0.89
RPS28-203ENST00000600659 SYS1-DBNDD2H3BUS1 97 aa9.51□□□□□ -0.89
RPS28-203ENST00000600659 SMIM13P0DJ93 91 aa9.51□□□□□ -0.89
RPS28-203ENST00000600659 A0A0U1RRA0 63 aa9.5□□□□□ -0.89
RPS28-203ENST00000600659 HERV-K104P63124 156 aa9.5□□□□□ -0.89
RPS28-203ENST00000600659 DIRC1Q969H9 104 aa9.5□□□□□ -0.89
RPS28-203ENST00000600659 LINC00158P58513 81 aa9.49□□□□□ -0.89
RPS28-203ENST00000600659 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
RPS28-203ENST00000600659 KRTAP13-1Q8IUC0 172 aa9.49□□□□□ -0.89
RPS28-203ENST00000600659 NKAPP1Q8N9T2 125 aa9.49□□□□□ -0.89
RPS28-203ENST00000600659 J3QQQ9 107 aa9.48□□□□□ -0.89
RPS28-203ENST00000600659 ZNF861PO60384 105 aa9.48□□□□□ -0.89
RPS28-203ENST00000600659 BCE1O60756 84 aa9.48□□□□□ -0.89
RPS28-203ENST00000600659 MIR7-3HGQ8N6C7 128 aa9.48□□□□□ -0.89
RPS28-203ENST00000600659 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
RPS28-203ENST00000600659 IGLV1-50A0A075B6I6 118 aa9.47□□□□□ -0.89
RPS28-203ENST00000600659 MYMXA0A1B0GTQ4 84 aa9.47□□□□□ -0.89
RPS28-203ENST00000600659 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
RPS28-203ENST00000600659 IGKV2-28A0A075B6P5 120 aa9.46□□□□□ -0.9
RPS28-203ENST00000600659 E9PLD3 99 aa9.46□□□□□ -0.9
RPS28-203ENST00000600659 IGKV2D-28P01615 120 aa9.46□□□□□ -0.9
RPS28-203ENST00000600659 HERVK_113P61574 105 aa9.46□□□□□ -0.9
RPS28-203ENST00000600659 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.9
RPS28-203ENST00000600659 PET117Q6UWS5 81 aa9.46□□□□□ -0.9
RPS28-203ENST00000600659 RPL24P83731 157 aaKnown RBP9.45□□□□□ -0.9
RPS28-203ENST00000600659 LOC107984156A0A0G2JMH3 177 aa9.43□□□□□ -0.9
RPS28-203ENST00000600659 TMEM238C9JI98 176 aa9.43□□□□□ -0.9
RPS28-203ENST00000600659 NMUP48645 174 aa9.43□□□□□ -0.9
RPS28-203ENST00000600659 ARL17AQ8IVW1 177 aa9.43□□□□□ -0.9
RPS28-203ENST00000600659 PRR26Q8N8Z3 221 aa9.43□□□□□ -0.9
RPS28-203ENST00000600659 DAND5Q8N907 189 aa9.43□□□□□ -0.9
RPS28-203ENST00000600659 M0R378 163 aa9.42□□□□□ -0.9
RPS28-203ENST00000600659 S100A6P06703 90 aa9.42□□□□□ -0.9
RPS28-203ENST00000600659 KRTDAPP60985 99 aa9.42□□□□□ -0.9
RPS28-203ENST00000600659 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
RPS28-203ENST00000600659 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
RPS28-203ENST00000600659 LINC00587B1AMM8 73 aa9.41□□□□□ -0.9
RPS28-203ENST00000600659 LGALS3P17931 250 aaKnown RBP9.41□□□□□ -0.9
RPS28-203ENST00000600659 BOD1L2Q8IYS8 172 aa9.41□□□□□ -0.9
RPS28-203ENST00000600659 S100A2P29034 98 aa9.4□□□□□ -0.9
RPS28-203ENST00000600659 RPL28P46779 137 aaKnown RBP9.4□□□□□ -0.9
RPS28-203ENST00000600659 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
RPS28-203ENST00000600659 C20orf202A1L168 122 aa9.39□□□□□ -0.91
RPS28-203ENST00000600659 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
RPS28-203ENST00000600659 NCR3O14931 201 aa9.38□□□□□ -0.91
RPS28-203ENST00000600659 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
RPS28-203ENST00000600659 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
RPS28-203ENST00000600659 LITAFQ99732 161 aa9.38□□□□□ -0.91
RPS28-203ENST00000600659 TTTY13Q9BZ97 58 aa9.38□□□□□ -0.91
RPS28-203ENST00000600659 PRLHP81277 87 aa9.37□□□□□ -0.91
RPS28-203ENST00000600659 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
RPS28-203ENST00000600659 SPRR1AP35321 89 aa9.36□□□□□ -0.91
RPS28-203ENST00000600659 AKR1D1P51857 326 aa9.36□□□□□ -0.91
RPS28-203ENST00000600659 LRP2P98164 4655 aa9.36□□□□□ -0.91
RPS28-203ENST00000600659 A0A087X002 238 aa9.35□□□□□ -0.91
RPS28-203ENST00000600659 UBE2AP49459 152 aa9.35□□□□□ -0.91
RPS28-203ENST00000600659 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
RPS28-203ENST00000600659 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
RPS28-203ENST00000600659 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
RPS28-203ENST00000600659 ANKRD39Q53RE8 183 aa9.34□□□□□ -0.91
RPS28-203ENST00000600659 FAM19A1Q7Z5A9 133 aa9.34□□□□□ -0.91
RPS28-203ENST00000600659 HIST1H2BLQ99880 126 aa9.34□□□□□ -0.91
RPS28-203ENST00000600659 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
RPS28-203ENST00000600659 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
RPS28-203ENST00000600659 PRYO14603 147 aa9.32□□□□□ -0.92
RPS28-203ENST00000600659 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
RPS28-203ENST00000600659 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
RPS28-203ENST00000600659 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
RPS28-203ENST00000600659 NDUFC2O95298 119 aa9.31□□□□□ -0.92
RPS28-203ENST00000600659 ANAPC11Q9NYG5 84 aa9.31□□□□□ -0.92
RPS28-203ENST00000600659 TIMM17BO60830 172 aa9.31□□□□□ -0.92
RPS28-203ENST00000600659 NPC2P61916 151 aa9.31□□□□□ -0.92
RPS28-203ENST00000600659 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
RPS28-203ENST00000600659 RPL13AP40429 203 aaKnown RBP9.3□□□□□ -0.92
RPS28-203ENST00000600659 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
RPS28-203ENST00000600659 LINC00337Q8N6G1 96 aa9.3□□□□□ -0.92
RPS28-203ENST00000600659 C5orf52A6NGY3 159 aa9.29□□□□□ -0.92
RPS28-203ENST00000600659 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
RPS28-203ENST00000600659 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
RPS28-203ENST00000600659 LPAP08519 4548 aa9.28□□□□□ -0.92
RPS28-203ENST00000600659 DDTP30046 118 aa9.28□□□□□ -0.92
RPS28-203ENST00000600659 MIEN1Q9BRT3 115 aa9.28□□□□□ -0.92
RPS28-203ENST00000600659 CRYGAP11844 174 aa9.26□□□□□ -0.93
RPS28-203ENST00000600659 FAM229BQ4G0N7 80 aa9.26□□□□□ -0.93
RPS28-203ENST00000600659 PCP2Q8IVA1 136 aa9.26□□□□□ -0.93
RPS28-203ENST00000600659 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
RPS28-203ENST00000600659 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
RPS28-203ENST00000600659 B5MCH6 92 aa9.24□□□□□ -0.93
RPS28-203ENST00000600659 HSBP1L1C9JCN9 74 aa9.24□□□□□ -0.93
RPS28-203ENST00000600659 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms