RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
PNKP-214ENST00000600573 M0QXV9 152 aa13.21□□□□□ -0.29
PNKP-214ENST00000600573 SYCNQ0VAF6 134 aa13.21□□□□□ -0.29
PNKP-214ENST00000600573 PLECQ15149 4684 aaKnown RBP13.2□□□□□ -0.3
PNKP-214ENST00000600573 SLC25A20O43772 301 aa13.2□□□□□ -0.3
PNKP-214ENST00000600573 ETDBQ3ZM63 59 aa13.2□□□□□ -0.3
PNKP-214ENST00000600573 OR13C6PQ8NH95 151 aa13.2□□□□□ -0.3
PNKP-214ENST00000600573 KRTAP1-5Q9BYS1 174 aa13.2□□□□□ -0.3
PNKP-214ENST00000600573 Q6ZRU5 148 aa13.19□□□□□ -0.3
PNKP-214ENST00000600573 SMIM11BQ8TCY0 68 aa13.18□□□□□ -0.3
PNKP-214ENST00000600573 DNAH1Q9P2D7 4330 aa13.18□□□□□ -0.3
PNKP-214ENST00000600573 TRBV10-2A0A0K0K1G8 114 aa13.17□□□□□ -0.3
PNKP-214ENST00000600573 PSCAO43653 123 aa13.17□□□□□ -0.3
PNKP-214ENST00000600573 C14orf177Q52M58 125 aa13.17□□□□□ -0.3
PNKP-214ENST00000600573 TGP01266 2768 aa13.17□□□□□ -0.3
PNKP-214ENST00000600573 NDUFC2-KCTD14E9PQ53 114 aa13.17□□□□□ -0.3
PNKP-214ENST00000600573 LINC01600Q96MT4 127 aa13.16□□□□□ -0.3
PNKP-214ENST00000600573 TEN1Q86WV5 123 aa13.15□□□□□ -0.3
PNKP-214ENST00000600573 CARD19Q96LW7 228 aa13.15□□□□□ -0.3
PNKP-214ENST00000600573 H3BT86 120 aa13.14□□□□□ -0.31
PNKP-214ENST00000600573 TLX1NBP0CAT3 122 aa13.14□□□□□ -0.31
PNKP-214ENST00000600573 CASC10Q5T4H9 136 aa13.14□□□□□ -0.31
PNKP-214ENST00000600573 ANKRD29Q8N6D5 301 aa13.14□□□□□ -0.31
PNKP-214ENST00000600573 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
PNKP-214ENST00000600573 TRACP01848 142 aa13.13□□□□□ -0.31
PNKP-214ENST00000600573 TMEM126AQ9H061 195 aa13.13□□□□□ -0.31
PNKP-214ENST00000600573 J3QR89 54 aa13.13□□□□□ -0.31
PNKP-214ENST00000600573 NCR3O14931 201 aa13.13□□□□□ -0.31
PNKP-214ENST00000600573 H0YGX0 51 aa13.12□□□□□ -0.31
PNKP-214ENST00000600573 Q8NDZ9 215 aa13.12□□□□□ -0.31
PNKP-214ENST00000600573 STARD9Q9P2P6 4700 aa13.12□□□□□ -0.31
PNKP-214ENST00000600573 PRR3P79522 188 aaKnown RBP13.11□□□□□ -0.31
PNKP-214ENST00000600573 C3orf84H3BNL1 204 aa13.1□□□□□ -0.31
PNKP-214ENST00000600573 PPDPFLQ8WWR9 84 aa13.1□□□□□ -0.31
PNKP-214ENST00000600573 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
PNKP-214ENST00000600573 XAGE1AQ9HD64 81 aa13.09□□□□□ -0.31
PNKP-214ENST00000600573 FAM218AQ96MZ4 157 aa13.08□□□□□ -0.32
PNKP-214ENST00000600573 CNBPP62633 177 aaKnown RBP13.07□□□□□ -0.32
PNKP-214ENST00000600573 SLPIP03973 132 aa13.06□□□□□ -0.32
PNKP-214ENST00000600573 VPS13DQ5THJ4 4388 aa13.06□□□□□ -0.32
PNKP-214ENST00000600573 RPL18AQ02543 176 aaKnown RBP13.05□□□□□ -0.32
PNKP-214ENST00000600573 Q6ZRP5 223 aa13.05□□□□□ -0.32
PNKP-214ENST00000600573 LECT2O14960 151 aa13.04□□□□□ -0.32
PNKP-214ENST00000600573 Q6ZR54 194 aa13.04□□□□□ -0.32
PNKP-214ENST00000600573 Q6ZRN7 208 aaPredicted RBP13.04□□□□□ -0.32
PNKP-214ENST00000600573 PKIGQ9Y2B9 76 aa13.04□□□□□ -0.32
PNKP-214ENST00000600573 LOC107984640A0A0U1RRK4 108 aa13.03□□□□□ -0.32
PNKP-214ENST00000600573 IGLV6-57P01721 117 aa13.03□□□□□ -0.32
PNKP-214ENST00000600573 VPS25Q9BRG1 176 aa13.03□□□□□ -0.32
PNKP-214ENST00000600573 CBY1Q9Y3M2 126 aa13.03□□□□□ -0.32
PNKP-214ENST00000600573 DNAL4O96015 105 aa13.02□□□□□ -0.32
PNKP-214ENST00000600573 VPREB1P12018 145 aa13.02□□□□□ -0.32
PNKP-214ENST00000600573 GAGE2EQ4V326 116 aa13.02□□□□□ -0.32
PNKP-214ENST00000600573 GAGE2DQ9UEU5 116 aa13.02□□□□□ -0.32
PNKP-214ENST00000600573 PLA2G2DQ9UNK4 145 aa13.02□□□□□ -0.32
PNKP-214ENST00000600573 A0A087WYN8 130 aa13.02□□□□□ -0.33
PNKP-214ENST00000600573 LYSTQ99698 3801 aa13.01□□□□□ -0.33
PNKP-214ENST00000600573 LRCOL1A6NCL2 159 aa13.01□□□□□ -0.33
PNKP-214ENST00000600573 A0A1B0GX51 115 aa12.99□□□□□ -0.33
PNKP-214ENST00000600573 M0R378 163 aa12.99□□□□□ -0.33
PNKP-214ENST00000600573 M0R2N4 97 aa12.99□□□□□ -0.33
PNKP-214ENST00000600573 LINC00476Q8WZB0 136 aa12.99□□□□□ -0.33
PNKP-214ENST00000600573 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
PNKP-214ENST00000600573 LY6G6CO95867 125 aa12.98□□□□□ -0.33
PNKP-214ENST00000600573 C6orf99Q4VX62 202 aa12.98□□□□□ -0.33
PNKP-214ENST00000600573 BAALC-AS2P0C853 105 aa12.97□□□□□ -0.33
PNKP-214ENST00000600573 TRAV23DV6A0A075B6W5 121 aa12.96□□□□□ -0.33
PNKP-214ENST00000600573 C9orf129Q5T035 196 aaKnown RBP12.96□□□□□ -0.33
PNKP-214ENST00000600573 TENM2Q9NT68 2774 aa12.94□□□□□ -0.34
PNKP-214ENST00000600573 TEX49A0A1B0GTD5 131 aa12.94□□□□□ -0.34
PNKP-214ENST00000600573 SNCGO76070 127 aa12.94□□□□□ -0.34
PNKP-214ENST00000600573 C1orf134Q5TEV5 83 aa12.94□□□□□ -0.34
PNKP-214ENST00000600573 DIRC1Q969H9 104 aa12.94□□□□□ -0.34
PNKP-214ENST00000600573 IGLV5-37A0A075B6J1 123 aa12.93□□□□□ -0.34
PNKP-214ENST00000600573 GAGE2BQ13066 116 aa12.93□□□□□ -0.34
PNKP-214ENST00000600573 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
PNKP-214ENST00000600573 Q8N814 137 aa12.92□□□□□ -0.34
PNKP-214ENST00000600573 NKAPP1Q8N9T2 125 aa12.92□□□□□ -0.34
PNKP-214ENST00000600573 C16orf90A8MZG2 172 aa12.91□□□□□ -0.34
PNKP-214ENST00000600573 C9orf163Q8N9P6 203 aa12.91□□□□□ -0.34
PNKP-214ENST00000600573 A0A087WTM6 91 aa12.9□□□□□ -0.34
PNKP-214ENST00000600573 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.34
PNKP-214ENST00000600573 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.89□□□□□ -0.35
PNKP-214ENST00000600573 ZNF73O43830 326 aaPredicted RBP12.89□□□□□ -0.35
PNKP-214ENST00000600573 LINC00575Q6W349 94 aa12.89□□□□□ -0.35
PNKP-214ENST00000600573 TRBV7-6A0A0J9YX20 115 aa12.88□□□□□ -0.35
PNKP-214ENST00000600573 DNAH10Q8IVF4 4471 aa12.88□□□□□ -0.35
PNKP-214ENST00000600573 SERTAD4-AS1Q5TG53 156 aa12.88□□□□□ -0.35
PNKP-214ENST00000600573 LINC00474Q9P2X8 69 aa12.88□□□□□ -0.35
PNKP-214ENST00000600573 C22orf24Q9Y442 160 aa12.88□□□□□ -0.35
PNKP-214ENST00000600573 COX7BP24311 80 aa12.86□□□□□ -0.35
PNKP-214ENST00000600573 DNAH6Q9C0G6 4158 aa12.85□□□□□ -0.35
PNKP-214ENST00000600573 hADV29S1A0JD25 119 aa12.84□□□□□ -0.35
PNKP-214ENST00000600573 C7orf33Q8WU49 177 aa12.84□□□□□ -0.35
PNKP-214ENST00000600573 INAFM2P0DMQ5 153 aa12.84□□□□□ -0.35
PNKP-214ENST00000600573 ELOF1P60002 83 aaKnown RBP12.84□□□□□ -0.35
PNKP-214ENST00000600573 KCNQ1DNQ9H478 68 aa12.83□□□□□ -0.36
PNKP-214ENST00000600573 A0A096LNI7 61 aa12.82□□□□□ -0.36
PNKP-214ENST00000600573 SDIM1Q6ZPB5 146 aa12.81□□□□□ -0.36
PNKP-214ENST00000600573 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 301.1 ms