RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
HIF3A-218ENST00000600383 CLEC2BQ92478 149 aa9.98□□□□□ -0.81
HIF3A-218ENST00000600383 J3QR89 54 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 PSCAO43653 123 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 Q8NDZ9 215 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 GAGE2DQ9UEU5 116 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
HIF3A-218ENST00000600383 WFDC2Q14508 124 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 TGP01266 2768 aa9.97□□□□□ -0.81
HIF3A-218ENST00000600383 NCR3O14931 201 aa9.96□□□□□ -0.82
HIF3A-218ENST00000600383 DYNC2H1Q8NCM8 4307 aaKnown RBP9.96□□□□□ -0.82
HIF3A-218ENST00000600383 SLPIP03973 132 aa9.95□□□□□ -0.82
HIF3A-218ENST00000600383 ATXN8Q156A1 80 aa9.95□□□□□ -0.82
HIF3A-218ENST00000600383 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
HIF3A-218ENST00000600383 SMIM11BQ8TCY0 68 aa9.95□□□□□ -0.82
HIF3A-218ENST00000600383 NDUFC2O95298 119 aa9.95□□□□□ -0.82
HIF3A-218ENST00000600383 PRO0461Q9UI25 63 aa9.95□□□□□ -0.82
HIF3A-218ENST00000600383 NDUFC2-KCTD14E9PQ53 114 aa9.94□□□□□ -0.82
HIF3A-218ENST00000600383 CARD19Q96LW7 228 aa9.94□□□□□ -0.82
HIF3A-218ENST00000600383 STARD9Q9P2P6 4700 aa9.94□□□□□ -0.82
HIF3A-218ENST00000600383 F8WDY8 70 aa9.94□□□□□ -0.82
HIF3A-218ENST00000600383 NBDYA0A0U1RRE5 68 aa9.93□□□□□ -0.82
HIF3A-218ENST00000600383 C9JAW5 83 aa9.93□□□□□ -0.82
HIF3A-218ENST00000600383 M0R2N4 97 aa9.93□□□□□ -0.82
HIF3A-218ENST00000600383 RPL28P46779 137 aaKnown RBP9.93□□□□□ -0.82
HIF3A-218ENST00000600383 Q6ZRP5 223 aa9.93□□□□□ -0.82
HIF3A-218ENST00000600383 DNAH1Q9P2D7 4330 aa9.93□□□□□ -0.82
HIF3A-218ENST00000600383 ETDBQ3ZM63 59 aa9.92□□□□□ -0.82
HIF3A-218ENST00000600383 S100A7L2Q5SY68 101 aa9.92□□□□□ -0.82
HIF3A-218ENST00000600383 RPL18AQ02543 176 aaKnown RBP9.91□□□□□ -0.82
HIF3A-218ENST00000600383 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
HIF3A-218ENST00000600383 LINC01620Q4KN68 170 aa9.91□□□□□ -0.82
HIF3A-218ENST00000600383 TTC32Q5I0X7 151 aa9.91□□□□□ -0.82
HIF3A-218ENST00000600383 TMEM126AQ9H061 195 aa9.91□□□□□ -0.82
HIF3A-218ENST00000600383 LST1O00453 97 aa9.89□□□□□ -0.83
HIF3A-218ENST00000600383 SLC25A20O43772 301 aa9.88□□□□□ -0.83
HIF3A-218ENST00000600383 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
HIF3A-218ENST00000600383 FAM218AQ96MZ4 157 aa9.88□□□□□ -0.83
HIF3A-218ENST00000600383 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
HIF3A-218ENST00000600383 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.86□□□□□ -0.83
HIF3A-218ENST00000600383 A0A1B0GV72 72 aa9.86□□□□□ -0.83
HIF3A-218ENST00000600383 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
HIF3A-218ENST00000600383 VPREB1P12018 145 aa9.85□□□□□ -0.83
HIF3A-218ENST00000600383 TRBV10-3A0A0K0K1G6 114 aa9.84□□□□□ -0.83
HIF3A-218ENST00000600383 H0YGX0 51 aa9.84□□□□□ -0.83
HIF3A-218ENST00000600383 TRBV10-2A0A0K0K1G8 114 aa9.83□□□□□ -0.84
HIF3A-218ENST00000600383 ANKRD29Q8N6D5 301 aa9.83□□□□□ -0.84
HIF3A-218ENST00000600383 A0A087WYN8 130 aa9.83□□□□□ -0.84
HIF3A-218ENST00000600383 IGLV6-57P01721 117 aa9.83□□□□□ -0.84
HIF3A-218ENST00000600383 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
HIF3A-218ENST00000600383 C6orf99Q4VX62 202 aa9.83□□□□□ -0.84
HIF3A-218ENST00000600383 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
HIF3A-218ENST00000600383 LY6G6CO95867 125 aa9.82□□□□□ -0.84
HIF3A-218ENST00000600383 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
HIF3A-218ENST00000600383 LOC107984640A0A0U1RRK4 108 aa9.8□□□□□ -0.84
HIF3A-218ENST00000600383 M0R378 163 aa9.8□□□□□ -0.84
HIF3A-218ENST00000600383 TRACP01848 142 aa9.8□□□□□ -0.84
HIF3A-218ENST00000600383 C14orf177Q52M58 125 aa9.8□□□□□ -0.84
HIF3A-218ENST00000600383 Q6ZRN7 208 aaPredicted RBP9.8□□□□□ -0.84
HIF3A-218ENST00000600383 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
HIF3A-218ENST00000600383 FAM168BA1KXE4 195 aa9.8□□□□□ -0.84
HIF3A-218ENST00000600383 CDIP1Q9H305 208 aa9.8□□□□□ -0.84
HIF3A-218ENST00000600383 LRCOL1A6NCL2 159 aa9.79□□□□□ -0.84
HIF3A-218ENST00000600383 TEN1Q86WV5 123 aa9.79□□□□□ -0.84
HIF3A-218ENST00000600383 DNAL4O96015 105 aa9.79□□□□□ -0.84
HIF3A-218ENST00000600383 TRAV23DV6A0A075B6W5 121 aa9.78□□□□□ -0.84
HIF3A-218ENST00000600383 CNBPP62633 177 aaKnown RBP9.78□□□□□ -0.84
HIF3A-218ENST00000600383 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.84
HIF3A-218ENST00000600383 BAALC-AS2P0C853 105 aa9.77□□□□□ -0.85
HIF3A-218ENST00000600383 PPDPFLQ8WWR9 84 aa9.77□□□□□ -0.85
HIF3A-218ENST00000600383 VPS13DQ5THJ4 4388 aa9.77□□□□□ -0.85
HIF3A-218ENST00000600383 H3BT86 120 aa9.76□□□□□ -0.85
HIF3A-218ENST00000600383 KMT2AQ03164 3969 aa9.76□□□□□ -0.85
HIF3A-218ENST00000600383 TEX49A0A1B0GTD5 131 aa9.75□□□□□ -0.85
HIF3A-218ENST00000600383 ZNF73O43830 326 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-218ENST00000600383 Q6ZR54 194 aa9.75□□□□□ -0.85
HIF3A-218ENST00000600383 FAM19A5Q7Z5A7 132 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-218ENST00000600383 A0A096LNI7 61 aa9.74□□□□□ -0.85
HIF3A-218ENST00000600383 M0QXV9 152 aa9.74□□□□□ -0.85
HIF3A-218ENST00000600383 C7orf33Q8WU49 177 aa9.74□□□□□ -0.85
HIF3A-218ENST00000600383 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
HIF3A-218ENST00000600383 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
HIF3A-218ENST00000600383 Q8N814 137 aa9.73□□□□□ -0.85
HIF3A-218ENST00000600383 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
HIF3A-218ENST00000600383 PLA2G2DQ9UNK4 145 aa9.73□□□□□ -0.85
HIF3A-218ENST00000600383 C16orf90A8MZG2 172 aa9.72□□□□□ -0.85
HIF3A-218ENST00000600383 SNCGO76070 127 aa9.72□□□□□ -0.85
HIF3A-218ENST00000600383 C22orf24Q9Y442 160 aa9.72□□□□□ -0.85
HIF3A-218ENST00000600383 XGP55808 180 aa9.71□□□□□ -0.85
HIF3A-218ENST00000600383 LINC00575Q6W349 94 aa9.71□□□□□ -0.85
HIF3A-218ENST00000600383 LINC00476Q8WZB0 136 aa9.71□□□□□ -0.85
HIF3A-218ENST00000600383 LINC01600Q96MT4 127 aa9.71□□□□□ -0.85
HIF3A-218ENST00000600383 MT-ATP8P03928 68 aa9.71□□□□□ -0.86
HIF3A-218ENST00000600383 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
HIF3A-218ENST00000600383 A0A087WTM6 91 aa9.7□□□□□ -0.86
HIF3A-218ENST00000600383 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
HIF3A-218ENST00000600383 C9orf163Q8N9P6 203 aa9.7□□□□□ -0.86
HIF3A-218ENST00000600383 LINC00167Q96N53 147 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms