RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PRSS2P07478 247 aa10.46□□□□□ -0.73
SSBP4-207ENST00000600244 C6orf226Q5I0X4 101 aa10.46□□□□□ -0.73
SSBP4-207ENST00000600244 TSPAN13O95857 204 aa10.45□□□□□ -0.74
SSBP4-207ENST00000600244 CXCL5P42830 114 aa10.45□□□□□ -0.74
SSBP4-207ENST00000600244 C6orf48Q9UBA6 75 aa10.45□□□□□ -0.74
SSBP4-207ENST00000600244 TMA7Q9Y2S6 64 aaKnown RBP10.45□□□□□ -0.74
SSBP4-207ENST00000600244 LINC01547P58512 204 aaPredicted RBP10.44□□□□□ -0.74
SSBP4-207ENST00000600244 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
SSBP4-207ENST00000600244 C20orf202A1L168 122 aa10.43□□□□□ -0.74
SSBP4-207ENST00000600244 CKS1BP61024 79 aa10.43□□□□□ -0.74
SSBP4-207ENST00000600244 C9orf116Q5BN46 136 aaPredicted RBP10.43□□□□□ -0.74
SSBP4-207ENST00000600244 PHF5AQ7RTV0 110 aaKnown RBP10.43□□□□□ -0.74
SSBP4-207ENST00000600244 TLX1NBP0CAT3 122 aa10.42□□□□□ -0.74
SSBP4-207ENST00000600244 GAGE2BQ13066 116 aa10.42□□□□□ -0.74
SSBP4-207ENST00000600244 ZNF625Q96I27 306 aaPredicted RBP10.41□□□□□ -0.74
SSBP4-207ENST00000600244 E9PLD3 99 aa10.4□□□□□ -0.74
SSBP4-207ENST00000600244 LEPROTO15243 131 aa10.4□□□□□ -0.74
SSBP4-207ENST00000600244 AKR1D1P51857 326 aa10.4□□□□□ -0.74
SSBP4-207ENST00000600244 TSPEAR-AS2P59090 65 aa10.4□□□□□ -0.74
SSBP4-207ENST00000600244 HERVK_113P61574 105 aa10.4□□□□□ -0.74
SSBP4-207ENST00000600244 LOC107984640A0A0U1RRK4 108 aa10.39□□□□□ -0.75
SSBP4-207ENST00000600244 KRTAP9-7A8MTY7 169 aa10.39□□□□□ -0.75
SSBP4-207ENST00000600244 KRTAP11-1Q8IUC1 163 aa10.39□□□□□ -0.75
SSBP4-207ENST00000600244 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
SSBP4-207ENST00000600244 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
SSBP4-207ENST00000600244 CDIP1Q9H305 208 aa10.38□□□□□ -0.75
SSBP4-207ENST00000600244 J3QQQ9 107 aa10.37□□□□□ -0.75
SSBP4-207ENST00000600244 ATOH7Q8N100 152 aa10.36□□□□□ -0.75
SSBP4-207ENST00000600244 IGKV2D-26A0A0A0MRZ7 120 aa10.35□□□□□ -0.75
SSBP4-207ENST00000600244 NDUFC2-KCTD14E9PQ53 114 aa10.35□□□□□ -0.75
SSBP4-207ENST00000600244 TPRXLQ17RH7 258 aa10.35□□□□□ -0.75
SSBP4-207ENST00000600244 NDUFA12Q9UI09 145 aa10.35□□□□□ -0.75
SSBP4-207ENST00000600244 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
SSBP4-207ENST00000600244 NMUP48645 174 aa10.33□□□□□ -0.76
SSBP4-207ENST00000600244 JOSD1Q15040 202 aaPredicted RBP10.33□□□□□ -0.76
SSBP4-207ENST00000600244 MYMXA0A1B0GTQ4 84 aa10.32□□□□□ -0.76
SSBP4-207ENST00000600244 SCGB1D1O95968 90 aa10.32□□□□□ -0.76
SSBP4-207ENST00000600244 LGALS3P17931 250 aaKnown RBP10.32□□□□□ -0.76
SSBP4-207ENST00000600244 HERV-K104P63124 156 aa10.32□□□□□ -0.76
SSBP4-207ENST00000600244 COX17Q14061 63 aa10.32□□□□□ -0.76
SSBP4-207ENST00000600244 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
SSBP4-207ENST00000600244 RPL18AQ02543 176 aaKnown RBP10.31□□□□□ -0.76
SSBP4-207ENST00000600244 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
SSBP4-207ENST00000600244 GAGE2EQ4V326 116 aa10.28□□□□□ -0.76
SSBP4-207ENST00000600244 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
SSBP4-207ENST00000600244 GAGE2DQ9UEU5 116 aa10.28□□□□□ -0.76
SSBP4-207ENST00000600244 PFN2P35080 140 aa10.27□□□□□ -0.77
SSBP4-207ENST00000600244 PYY3Q5JQD4 70 aa10.27□□□□□ -0.77
SSBP4-207ENST00000600244 KRTAP7-1Q8IUC3 87 aa10.27□□□□□ -0.77
SSBP4-207ENST00000600244 TTTY13Q9BZ97 58 aa10.27□□□□□ -0.77
SSBP4-207ENST00000600244 A0A0J9YXY3 114 aa10.26□□□□□ -0.77
SSBP4-207ENST00000600244 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.26□□□□□ -0.77
SSBP4-207ENST00000600244 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
SSBP4-207ENST00000600244 CRYGAP11844 174 aa10.26□□□□□ -0.77
SSBP4-207ENST00000600244 SMIM13P0DJ93 91 aa10.25□□□□□ -0.77
SSBP4-207ENST00000600244 KRTAP4-1Q9BYQ7 146 aa10.25□□□□□ -0.77
SSBP4-207ENST00000600244 XAGE1AQ9HD64 81 aa10.25□□□□□ -0.77
SSBP4-207ENST00000600244 IGLV7-46A0A075B6I9 117 aa10.24□□□□□ -0.77
SSBP4-207ENST00000600244 ZNF815PA8K554 130 aa10.24□□□□□ -0.77
SSBP4-207ENST00000600244 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
SSBP4-207ENST00000600244 LINC00158P58513 81 aa10.24□□□□□ -0.77
SSBP4-207ENST00000600244 PCP2Q8IVA1 136 aa10.24□□□□□ -0.77
SSBP4-207ENST00000600244 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
SSBP4-207ENST00000600244 A0A087X002 238 aa10.23□□□□□ -0.77
SSBP4-207ENST00000600244 FAM168BA1KXE4 195 aa10.23□□□□□ -0.77
SSBP4-207ENST00000600244 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
SSBP4-207ENST00000600244 LITAFQ99732 161 aa10.23□□□□□ -0.77
SSBP4-207ENST00000600244 TIMM17BO60830 172 aa10.22□□□□□ -0.77
SSBP4-207ENST00000600244 MIR7-3HGQ8N6C7 128 aa10.22□□□□□ -0.77
SSBP4-207ENST00000600244 A0A0U1RRA0 63 aa10.21□□□□□ -0.77
SSBP4-207ENST00000600244 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
SSBP4-207ENST00000600244 ADAMTSL4-AS1Q5T5F5 129 aa10.2□□□□□ -0.78
SSBP4-207ENST00000600244 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
SSBP4-207ENST00000600244 TYMSOSQ8TAI1 123 aa10.2□□□□□ -0.78
SSBP4-207ENST00000600244 LCE2CQ5TA81 110 aa10.19□□□□□ -0.78
SSBP4-207ENST00000600244 IGLV5-37A0A075B6J1 123 aa10.18□□□□□ -0.78
SSBP4-207ENST00000600244 LOC105371267A0A1B0GV96 52 aa10.18□□□□□ -0.78
SSBP4-207ENST00000600244 ZNF861PO60384 105 aa10.18□□□□□ -0.78
SSBP4-207ENST00000600244 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
SSBP4-207ENST00000600244 Q8NDZ9 215 aa10.18□□□□□ -0.78
SSBP4-207ENST00000600244 VAMP8Q9BV40 100 aa10.18□□□□□ -0.78
SSBP4-207ENST00000600244 PAM16Q9Y3D7 125 aa10.18□□□□□ -0.78
SSBP4-207ENST00000600244 COX8AP10176 69 aa10.17□□□□□ -0.78
SSBP4-207ENST00000600244 VPREB1P12018 145 aa10.17□□□□□ -0.78
SSBP4-207ENST00000600244 FAM19A5Q7Z5A7 132 aaPredicted RBP10.17□□□□□ -0.78
SSBP4-207ENST00000600244 BOD1L2Q8IYS8 172 aa10.17□□□□□ -0.78
SSBP4-207ENST00000600244 DAND5Q8N907 189 aa10.17□□□□□ -0.78
SSBP4-207ENST00000600244 DLEU1O43261 78 aa10.16□□□□□ -0.78
SSBP4-207ENST00000600244 SPATA45Q537H7 98 aa10.16□□□□□ -0.78
SSBP4-207ENST00000600244 TP73-AS1Q9UF72 201 aa10.16□□□□□ -0.78
SSBP4-207ENST00000600244 EIF4EBP3O60516 100 aaPredicted RBP10.15□□□□□ -0.78
SSBP4-207ENST00000600244 SOSTDC1Q6X4U4 206 aa10.15□□□□□ -0.78
SSBP4-207ENST00000600244 C22orf24Q9Y442 160 aa10.15□□□□□ -0.78
SSBP4-207ENST00000600244 M0QXV9 152 aa10.14□□□□□ -0.79
SSBP4-207ENST00000600244 SCGB1D4Q6XE38 83 aa10.14□□□□□ -0.79
SSBP4-207ENST00000600244 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
SSBP4-207ENST00000600244 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
SSBP4-207ENST00000600244 UBE2BP63146 152 aa10.13□□□□□ -0.79
SSBP4-207ENST00000600244 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
SSBP4-207ENST00000600244 TMEM238C9JI98 176 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms