RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
FARP1-229ENST00000600190 LINC01545Q5VT33 79 aa11.61□□□□□ -0.55
FARP1-229ENST00000600190 A0A1W2PNN7 141 aa11.6□□□□□ -0.55
FARP1-229ENST00000600190 LINC00158P58513 81 aa11.6□□□□□ -0.55
FARP1-229ENST00000600190 MEIG1Q5JSS6 88 aa11.6□□□□□ -0.55
FARP1-229ENST00000600190 NDUFA12Q9UI09 145 aa11.6□□□□□ -0.55
FARP1-229ENST00000600190 FAM19A5Q7Z5A7 132 aaPredicted RBP11.59□□□□□ -0.55
FARP1-229ENST00000600190 XAGE1AQ9HD64 81 aa11.59□□□□□ -0.55
FARP1-229ENST00000600190 J3QQQ9 107 aa11.58□□□□□ -0.56
FARP1-229ENST00000600190 NMUP48645 174 aa11.58□□□□□ -0.56
FARP1-229ENST00000600190 HIST3H2BBQ8N257 126 aa11.58□□□□□ -0.56
FARP1-229ENST00000600190 PSORS1C2Q9UIG4 136 aa11.57□□□□□ -0.56
FARP1-229ENST00000600190 LPAP08519 4548 aa11.56□□□□□ -0.56
FARP1-229ENST00000600190 SNRPEP62304 92 aaKnown RBP11.56□□□□□ -0.56
FARP1-229ENST00000600190 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
FARP1-229ENST00000600190 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
FARP1-229ENST00000600190 E9PLD3 99 aa11.55□□□□□ -0.56
FARP1-229ENST00000600190 M0QXV9 152 aa11.55□□□□□ -0.56
FARP1-229ENST00000600190 UBE2BP63146 152 aa11.55□□□□□ -0.56
FARP1-229ENST00000600190 FAM168BA1KXE4 195 aa11.54□□□□□ -0.56
FARP1-229ENST00000600190 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
FARP1-229ENST00000600190 PHF5AQ7RTV0 110 aaKnown RBP11.54□□□□□ -0.56
FARP1-229ENST00000600190 A0A0U1RRA0 63 aa11.53□□□□□ -0.56
FARP1-229ENST00000600190 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
FARP1-229ENST00000600190 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
FARP1-229ENST00000600190 HIST1H2BLQ99880 126 aa11.53□□□□□ -0.56
FARP1-229ENST00000600190 SMIM13P0DJ93 91 aa11.51□□□□□ -0.57
FARP1-229ENST00000600190 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
FARP1-229ENST00000600190 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
FARP1-229ENST00000600190 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
FARP1-229ENST00000600190 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
FARP1-229ENST00000600190 TP73-AS1Q9UF72 201 aa11.49□□□□□ -0.57
FARP1-229ENST00000600190 MRPL55Q7Z7F7 128 aaKnown RBP11.48□□□□□ -0.57
FARP1-229ENST00000600190 TSPEAR-AS2P59090 65 aa11.47□□□□□ -0.57
FARP1-229ENST00000600190 MIR7-3HGQ8N6C7 128 aa11.47□□□□□ -0.57
FARP1-229ENST00000600190 MIEN1Q9BRT3 115 aa11.47□□□□□ -0.57
FARP1-229ENST00000600190 PRR26Q8N8Z3 221 aa11.46□□□□□ -0.57
FARP1-229ENST00000600190 SCGB1D1O95968 90 aa11.45□□□□□ -0.58
FARP1-229ENST00000600190 IGLV7-43P04211 117 aa11.45□□□□□ -0.58
FARP1-229ENST00000600190 ATOH7Q8N100 152 aa11.45□□□□□ -0.58
FARP1-229ENST00000600190 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
FARP1-229ENST00000600190 ZNF815PA8K554 130 aa11.44□□□□□ -0.58
FARP1-229ENST00000600190 IGLV5-37A0A075B6J1 123 aa11.43□□□□□ -0.58
FARP1-229ENST00000600190 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
FARP1-229ENST00000600190 BOD1L2Q8IYS8 172 aa11.42□□□□□ -0.58
FARP1-229ENST00000600190 LINC00167Q96N53 147 aa11.42□□□□□ -0.58
FARP1-229ENST00000600190 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
FARP1-229ENST00000600190 SCGB1D4Q6XE38 83 aa11.41□□□□□ -0.58
FARP1-229ENST00000600190 KRTAP11-1Q8IUC1 163 aa11.41□□□□□ -0.58
FARP1-229ENST00000600190 GAGE10A6NGK3 116 aa11.4□□□□□ -0.58
FARP1-229ENST00000600190 H0Y9J4 135 aa11.4□□□□□ -0.58
FARP1-229ENST00000600190 S100A12P80511 92 aa11.4□□□□□ -0.58
FARP1-229ENST00000600190 IGKV2D-26A0A0A0MRZ7 120 aa11.39□□□□□ -0.59
FARP1-229ENST00000600190 RPL37AP8A6NKH3 93 aa11.39□□□□□ -0.59
FARP1-229ENST00000600190 VPREB1P12018 145 aa11.39□□□□□ -0.59
FARP1-229ENST00000600190 M0R378 163 aa11.38□□□□□ -0.59
FARP1-229ENST00000600190 DAND5Q8N907 189 aa11.38□□□□□ -0.59
FARP1-229ENST00000600190 TIMM17BO60830 172 aa11.37□□□□□ -0.59
FARP1-229ENST00000600190 ANKRD39Q53RE8 183 aa11.37□□□□□ -0.59
FARP1-229ENST00000600190 COPS9Q8WXC6 57 aa11.37□□□□□ -0.59
FARP1-229ENST00000600190 TMA7Q9Y2S6 64 aaKnown RBP11.36□□□□□ -0.59
FARP1-229ENST00000600190 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
FARP1-229ENST00000600190 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
FARP1-229ENST00000600190 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
FARP1-229ENST00000600190 IGLV1-50A0A075B6I6 118 aa11.34□□□□□ -0.59
FARP1-229ENST00000600190 LOC107984156A0A0G2JMH3 177 aa11.34□□□□□ -0.59
FARP1-229ENST00000600190 ARL17AQ8IVW1 177 aa11.34□□□□□ -0.59
FARP1-229ENST00000600190 NPC2P61916 151 aa11.33□□□□□ -0.6
FARP1-229ENST00000600190 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
FARP1-229ENST00000600190 MUC2Q02817 5179 aa11.33□□□□□ -0.6
FARP1-229ENST00000600190 NCR3O14931 201 aa11.32□□□□□ -0.6
FARP1-229ENST00000600190 KRTAP1-4P0C5Y4 121 aa11.32□□□□□ -0.6
FARP1-229ENST00000600190 NDUFC2O95298 119 aa11.31□□□□□ -0.6
FARP1-229ENST00000600190 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
FARP1-229ENST00000600190 ADAMTSL4-AS1Q5T5F5 129 aa11.31□□□□□ -0.6
FARP1-229ENST00000600190 BCE1O60756 84 aa11.3□□□□□ -0.6
FARP1-229ENST00000600190 UBE2AP49459 152 aa11.3□□□□□ -0.6
FARP1-229ENST00000600190 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
FARP1-229ENST00000600190 Q6ZVH6 145 aa11.3□□□□□ -0.6
FARP1-229ENST00000600190 CBY1Q9Y3M2 126 aa11.3□□□□□ -0.6
FARP1-229ENST00000600190 TRBV10-2A0A0K0K1G8 114 aa11.29□□□□□ -0.6
FARP1-229ENST00000600190 PRR4Q16378 134 aa11.29□□□□□ -0.6
FARP1-229ENST00000600190 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
FARP1-229ENST00000600190 LINC00308Q8TCZ7 52 aa11.29□□□□□ -0.6
FARP1-229ENST00000600190 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
FARP1-229ENST00000600190 ZNF861PO60384 105 aa11.28□□□□□ -0.6
FARP1-229ENST00000600190 IFITM1P13164 125 aa11.27□□□□□ -0.61
FARP1-229ENST00000600190 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.61
FARP1-229ENST00000600190 SPANXDQ9BXN6 97 aa11.27□□□□□ -0.61
FARP1-229ENST00000600190 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
FARP1-229ENST00000600190 RPL13AP40429 203 aaKnown RBP11.26□□□□□ -0.61
FARP1-229ENST00000600190 FAM19A1Q7Z5A9 133 aa11.26□□□□□ -0.61
FARP1-229ENST00000600190 LINC00518Q8N0U6 118 aa11.26□□□□□ -0.61
FARP1-229ENST00000600190 Q8NDZ9 215 aa11.26□□□□□ -0.61
FARP1-229ENST00000600190 LITAFQ99732 161 aa11.26□□□□□ -0.61
FARP1-229ENST00000600190 VAMP8Q9BV40 100 aa11.26□□□□□ -0.61
FARP1-229ENST00000600190 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
FARP1-229ENST00000600190 PRYO14603 147 aa11.25□□□□□ -0.61
FARP1-229ENST00000600190 DDTP30046 118 aa11.25□□□□□ -0.61
FARP1-229ENST00000600190 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms