RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 IBA57-AS1B1ANH7 110 aa10.2□□□□□ -0.78
VRK3-218ENST00000600031 CD164L2Q6UWJ8 174 aa10.2□□□□□ -0.78
VRK3-218ENST00000600031 BAALC-AS2P0C853 105 aa10.19□□□□□ -0.78
VRK3-218ENST00000600031 LINC00158P58513 81 aa10.19□□□□□ -0.78
VRK3-218ENST00000600031 TGP01266 2768 aa10.17□□□□□ -0.78
VRK3-218ENST00000600031 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
VRK3-218ENST00000600031 TRBV7-7A0A0K0K1E9 115 aa10.17□□□□□ -0.78
VRK3-218ENST00000600031 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
VRK3-218ENST00000600031 LINC00337Q8N6G1 96 aa10.17□□□□□ -0.78
VRK3-218ENST00000600031 FAM218AQ96MZ4 157 aa10.17□□□□□ -0.78
VRK3-218ENST00000600031 TENM2Q9NT68 2774 aa10.17□□□□□ -0.78
VRK3-218ENST00000600031 H0YGX0 51 aa10.15□□□□□ -0.78
VRK3-218ENST00000600031 INAFM2P0DMQ5 153 aa10.15□□□□□ -0.78
VRK3-218ENST00000600031 UBE2DNLQ8IWF7 75 aa10.15□□□□□ -0.78
VRK3-218ENST00000600031 IMUPQ9GZP8 106 aa10.15□□□□□ -0.78
VRK3-218ENST00000600031 DNAH1Q9P2D7 4330 aa10.15□□□□□ -0.78
VRK3-218ENST00000600031 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.79
VRK3-218ENST00000600031 LINC01561Q8N1V8 128 aa10.15□□□□□ -0.79
VRK3-218ENST00000600031 MALP21145 153 aa10.13□□□□□ -0.79
VRK3-218ENST00000600031 SMIM11BQ8TCY0 68 aa10.13□□□□□ -0.79
VRK3-218ENST00000600031 C22orf24Q9Y442 160 aa10.13□□□□□ -0.79
VRK3-218ENST00000600031 Q9HAA7 133 aa10.13□□□□□ -0.79
VRK3-218ENST00000600031 DNAL4O96015 105 aa10.12□□□□□ -0.79
VRK3-218ENST00000600031 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
VRK3-218ENST00000600031 LINC00643Q86TS7 51 aa10.12□□□□□ -0.79
VRK3-218ENST00000600031 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
VRK3-218ENST00000600031 PFN2P35080 140 aa10.11□□□□□ -0.79
VRK3-218ENST00000600031 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
VRK3-218ENST00000600031 C1orf43Q9BWL3 253 aa10.11□□□□□ -0.79
VRK3-218ENST00000600031 IGKV2D-24A0A075B6R9 120 aa10.1□□□□□ -0.79
VRK3-218ENST00000600031 Q8IZM0 81 aa10.1□□□□□ -0.79
VRK3-218ENST00000600031 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
VRK3-218ENST00000600031 KIAA0087Q14695 138 aa10.09□□□□□ -0.79
VRK3-218ENST00000600031 WWC2-AS2Q96NR7 200 aa10.09□□□□□ -0.79
VRK3-218ENST00000600031 VPS13DQ5THJ4 4388 aa10.08□□□□□ -0.8
VRK3-218ENST00000600031 B5MCH6 92 aa10.08□□□□□ -0.8
VRK3-218ENST00000600031 A0A087WYN8 130 aa10.07□□□□□ -0.8
VRK3-218ENST00000600031 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
VRK3-218ENST00000600031 CCDC179H3BU77 68 aa10.07□□□□□ -0.8
VRK3-218ENST00000600031 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
VRK3-218ENST00000600031 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
VRK3-218ENST00000600031 CXCL5P42830 114 aa10.05□□□□□ -0.8
VRK3-218ENST00000600031 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
VRK3-218ENST00000600031 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
VRK3-218ENST00000600031 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
VRK3-218ENST00000600031 OBSCN-AS1Q96MR7 158 aa10.04□□□□□ -0.8
VRK3-218ENST00000600031 COX17Q14061 63 aa10.04□□□□□ -0.8
VRK3-218ENST00000600031 CASC10Q5T4H9 136 aa10.04□□□□□ -0.8
VRK3-218ENST00000600031 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
VRK3-218ENST00000600031 LECT2O14960 151 aa10.03□□□□□ -0.8
VRK3-218ENST00000600031 A0A1B0GX51 115 aa10.03□□□□□ -0.8
VRK3-218ENST00000600031 NDUFC2O95298 119 aa10.03□□□□□ -0.8
VRK3-218ENST00000600031 SS18L2Q9UHA2 77 aa10.03□□□□□ -0.8
VRK3-218ENST00000600031 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.81
VRK3-218ENST00000600031 RMI2Q96E14 147 aa10.02□□□□□ -0.81
VRK3-218ENST00000600031 DNAH10Q8IVF4 4471 aa10.02□□□□□ -0.81
VRK3-218ENST00000600031 FAM236AA0A1B0GUQ0 79 aa10.01□□□□□ -0.81
VRK3-218ENST00000600031 FAM236BA0A1B0GV22 79 aa10.01□□□□□ -0.81
VRK3-218ENST00000600031 NBDYA0A0U1RRE5 68 aa10.01□□□□□ -0.81
VRK3-218ENST00000600031 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
VRK3-218ENST00000600031 UNQ6190/PRO20217Q6UXQ8 127 aa10.01□□□□□ -0.81
VRK3-218ENST00000600031 ORMDL1Q9P0S3 153 aa10□□□□□ -0.81
VRK3-218ENST00000600031 LINC00167Q96N53 147 aa9.99□□□□□ -0.81
VRK3-218ENST00000600031 C14orf132Q9NPU4 83 aa9.99□□□□□ -0.81
VRK3-218ENST00000600031 KMT2AQ03164 3969 aa9.99□□□□□ -0.81
VRK3-218ENST00000600031 ZNF561-AS1K7EIQ3 104 aa9.98□□□□□ -0.81
VRK3-218ENST00000600031 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
VRK3-218ENST00000600031 TMEM126AQ9H061 195 aa9.98□□□□□ -0.81
VRK3-218ENST00000600031 GVQW2A0A096LPI5 108 aaPredicted RBP9.97□□□□□ -0.81
VRK3-218ENST00000600031 C9orf129Q5T035 196 aaKnown RBP9.97□□□□□ -0.81
VRK3-218ENST00000600031 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
VRK3-218ENST00000600031 M0R2N4 97 aa9.97□□□□□ -0.81
VRK3-218ENST00000600031 C3orf84H3BNL1 204 aa9.95□□□□□ -0.82
VRK3-218ENST00000600031 CAMK2N2Q96S95 79 aa9.95□□□□□ -0.82
VRK3-218ENST00000600031 SLPIP03973 132 aa9.95□□□□□ -0.82
VRK3-218ENST00000600031 C6orf48Q9UBA6 75 aa9.95□□□□□ -0.82
VRK3-218ENST00000600031 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
VRK3-218ENST00000600031 Q6JHZ5 121 aa9.94□□□□□ -0.82
VRK3-218ENST00000600031 Q8N814 137 aa9.94□□□□□ -0.82
VRK3-218ENST00000600031 C2orf48Q96LS8 159 aa9.94□□□□□ -0.82
VRK3-218ENST00000600031 NCR3O14931 201 aa9.94□□□□□ -0.82
VRK3-218ENST00000600031 LY6G6CO95867 125 aa9.94□□□□□ -0.82
VRK3-218ENST00000600031 Q6ZRU5 148 aa9.94□□□□□ -0.82
VRK3-218ENST00000600031 TMEM256-PLSCR3K7ERE1 68 aa9.93□□□□□ -0.82
VRK3-218ENST00000600031 PSCAO43653 123 aa9.93□□□□□ -0.82
VRK3-218ENST00000600031 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
VRK3-218ENST00000600031 CCKP06307 115 aa9.92□□□□□ -0.82
VRK3-218ENST00000600031 LINC00846Q9NV44 126 aa9.92□□□□□ -0.82
VRK3-218ENST00000600031 UQCRQO14949 82 aa9.91□□□□□ -0.82
VRK3-218ENST00000600031 Q6ZRN7 208 aaPredicted RBP9.91□□□□□ -0.82
VRK3-218ENST00000600031 C3orf22Q8N5N4 141 aa9.91□□□□□ -0.82
VRK3-218ENST00000600031 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
VRK3-218ENST00000600031 ALMS1Q8TCU4 4167 aa9.91□□□□□ -0.82
VRK3-218ENST00000600031 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
VRK3-218ENST00000600031 Q6ZR54 194 aa9.91□□□□□ -0.82
VRK3-218ENST00000600031 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
VRK3-218ENST00000600031 SYCNQ0VAF6 134 aa9.9□□□□□ -0.82
VRK3-218ENST00000600031 F8WDY8 70 aa9.89□□□□□ -0.83
VRK3-218ENST00000600031 ATOX1O00244 68 aa9.89□□□□□ -0.83
VRK3-218ENST00000600031 S100A7L2Q5SY68 101 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms