RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 HIST1H2BKO60814 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 IGKV2D-28P01615 120 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BJP06899 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BOP23527 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BBP33778 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 UBE2AP49459 152 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BDP58876 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BCP62807 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST2H2BEQ16778 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BHQ93079 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BNQ99877 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 HIST1H2BMQ99879 126 aa11.79□□□□□ -0.52
ARHGEF1-217ENST00000598812 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-217ENST00000598812 VPREB1P12018 145 aa11.76□□□□□ -0.53
ARHGEF1-217ENST00000598812 PMCHL2Q9BQD1 86 aa11.76□□□□□ -0.53
ARHGEF1-217ENST00000598812 LINC00158P58513 81 aa11.74□□□□□ -0.53
ARHGEF1-217ENST00000598812 CRYGAP11844 174 aa11.73□□□□□ -0.53
ARHGEF1-217ENST00000598812 KRTAP13-1Q8IUC0 172 aa11.73□□□□□ -0.53
ARHGEF1-217ENST00000598812 KRTAP9-2Q9BYQ4 174 aa11.73□□□□□ -0.53
ARHGEF1-217ENST00000598812 A0A0U1RRA0 63 aa11.72□□□□□ -0.53
ARHGEF1-217ENST00000598812 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
ARHGEF1-217ENST00000598812 A0A087X002 238 aa11.71□□□□□ -0.53
ARHGEF1-217ENST00000598812 DPM2O94777 84 aa11.71□□□□□ -0.53
ARHGEF1-217ENST00000598812 PLNP26678 52 aa11.71□□□□□ -0.53
ARHGEF1-217ENST00000598812 ATP6V1G1O75348 118 aa11.7□□□□□ -0.54
ARHGEF1-217ENST00000598812 TMEM126AQ9H061 195 aa11.7□□□□□ -0.54
ARHGEF1-217ENST00000598812 TMEM238C9JI98 176 aa11.69□□□□□ -0.54
ARHGEF1-217ENST00000598812 PRLHP81277 87 aa11.69□□□□□ -0.54
ARHGEF1-217ENST00000598812 FAM19A1Q7Z5A9 133 aa11.69□□□□□ -0.54
ARHGEF1-217ENST00000598812 Q8NDZ9 215 aa11.69□□□□□ -0.54
ARHGEF1-217ENST00000598812 TYMSOSQ8TAI1 123 aa11.69□□□□□ -0.54
ARHGEF1-217ENST00000598812 IGKCP01834 107 aa11.68□□□□□ -0.54
ARHGEF1-217ENST00000598812 MEIG1Q5JSS6 88 aa11.68□□□□□ -0.54
ARHGEF1-217ENST00000598812 ANAPC11Q9NYG5 84 aa11.68□□□□□ -0.54
ARHGEF1-217ENST00000598812 SMIM13P0DJ93 91 aa11.67□□□□□ -0.54
ARHGEF1-217ENST00000598812 PRR4Q16378 134 aa11.67□□□□□ -0.54
ARHGEF1-217ENST00000598812 NDUFA12Q9UI09 145 aa11.67□□□□□ -0.54
ARHGEF1-217ENST00000598812 LPAP08519 4548 aa11.67□□□□□ -0.54
ARHGEF1-217ENST00000598812 M0R378 163 aa11.66□□□□□ -0.54
ARHGEF1-217ENST00000598812 LEPROTO15243 131 aa11.66□□□□□ -0.54
ARHGEF1-217ENST00000598812 TSPAN13O95857 204 aa11.66□□□□□ -0.54
ARHGEF1-217ENST00000598812 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
ARHGEF1-217ENST00000598812 HERV-K104P63124 156 aa11.66□□□□□ -0.54
ARHGEF1-217ENST00000598812 SYS1-DBNDD2H3BUS1 97 aa11.65□□□□□ -0.54
ARHGEF1-217ENST00000598812 HERVK_113P61574 105 aa11.65□□□□□ -0.54
ARHGEF1-217ENST00000598812 FAM229BQ4G0N7 80 aa11.65□□□□□ -0.54
ARHGEF1-217ENST00000598812 PLEKHB2Q96CS7 222 aa11.65□□□□□ -0.54
ARHGEF1-217ENST00000598812 MYMXA0A1B0GTQ4 84 aa11.64□□□□□ -0.55
ARHGEF1-217ENST00000598812 S100A1P23297 94 aa11.64□□□□□ -0.55
ARHGEF1-217ENST00000598812 LINC00587B1AMM8 73 aa11.63□□□□□ -0.55
ARHGEF1-217ENST00000598812 BOD1L2Q8IYS8 172 aa11.63□□□□□ -0.55
ARHGEF1-217ENST00000598812 J3QQQ9 107 aa11.62□□□□□ -0.55
ARHGEF1-217ENST00000598812 MIR7-3HGQ8N6C7 128 aa11.62□□□□□ -0.55
ARHGEF1-217ENST00000598812 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-217ENST00000598812 KRTAP13-2Q52LG2 175 aa11.61□□□□□ -0.55
ARHGEF1-217ENST00000598812 IGKV2D-26A0A0A0MRZ7 120 aa11.6□□□□□ -0.55
ARHGEF1-217ENST00000598812 COA6Q5JTJ3 125 aaKnown RBP11.6□□□□□ -0.55
ARHGEF1-217ENST00000598812 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
ARHGEF1-217ENST00000598812 NCR3O14931 201 aa11.58□□□□□ -0.56
ARHGEF1-217ENST00000598812 C3orf79P0CE67 100 aa11.58□□□□□ -0.56
ARHGEF1-217ENST00000598812 KRTDAPP60985 99 aa11.58□□□□□ -0.56
ARHGEF1-217ENST00000598812 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
ARHGEF1-217ENST00000598812 PET117Q6UWS5 81 aa11.58□□□□□ -0.56
ARHGEF1-217ENST00000598812 DAND5Q8N907 189 aa11.57□□□□□ -0.56
ARHGEF1-217ENST00000598812 KRTAP9-6A0A140TA67 174 aa11.56□□□□□ -0.56
ARHGEF1-217ENST00000598812 PRYO14603 147 aa11.56□□□□□ -0.56
ARHGEF1-217ENST00000598812 LINC00304Q8N9R0 145 aa11.56□□□□□ -0.56
ARHGEF1-217ENST00000598812 E9PLD3 99 aa11.55□□□□□ -0.56
ARHGEF1-217ENST00000598812 NMUP48645 174 aa11.55□□□□□ -0.56
ARHGEF1-217ENST00000598812 S100A12P80511 92 aa11.52□□□□□ -0.57
ARHGEF1-217ENST00000598812 KCNQ1DNQ9H478 68 aa11.52□□□□□ -0.57
ARHGEF1-217ENST00000598812 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
ARHGEF1-217ENST00000598812 LINC00337Q8N6G1 96 aa11.51□□□□□ -0.57
ARHGEF1-217ENST00000598812 ZNF706Q9Y5V0 76 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF1-217ENST00000598812 ETDCA0A1B0GVM5 59 aa11.5□□□□□ -0.57
ARHGEF1-217ENST00000598812 SPRR4Q96PI1 79 aa11.5□□□□□ -0.57
ARHGEF1-217ENST00000598812 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
ARHGEF1-217ENST00000598812 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
ARHGEF1-217ENST00000598812 SPRR1AP35321 89 aa11.49□□□□□ -0.57
ARHGEF1-217ENST00000598812 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
ARHGEF1-217ENST00000598812 NPC2P61916 151 aa11.48□□□□□ -0.57
ARHGEF1-217ENST00000598812 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
ARHGEF1-217ENST00000598812 C3orf22Q8N5N4 141 aa11.48□□□□□ -0.57
ARHGEF1-217ENST00000598812 FAT4Q6V0I7 4981 aa11.47□□□□□ -0.57
ARHGEF1-217ENST00000598812 ATOH7Q8N100 152 aa11.47□□□□□ -0.57
ARHGEF1-217ENST00000598812 TRBV10-2A0A0K0K1G8 114 aa11.46□□□□□ -0.57
ARHGEF1-217ENST00000598812 C20orf202A1L168 122 aa11.46□□□□□ -0.57
ARHGEF1-217ENST00000598812 ADAMTSL4-AS1Q5T5F5 129 aa11.46□□□□□ -0.57
ARHGEF1-217ENST00000598812 RETNLBQ9BQ08 111 aa11.46□□□□□ -0.57
ARHGEF1-217ENST00000598812 TTTY13Q9BZ97 58 aa11.46□□□□□ -0.57
ARHGEF1-217ENST00000598812 KRTAP4-16G5E9R7 235 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF1-217ENST00000598812 DDTP30046 118 aa11.45□□□□□ -0.58
ARHGEF1-217ENST00000598812 CTAG1AP78358 180 aa11.45□□□□□ -0.58
ARHGEF1-217ENST00000598812 SMCR5Q8TEV8 140 aa11.45□□□□□ -0.58
ARHGEF1-217ENST00000598812 SPANXB1Q9NS25 103 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF1-217ENST00000598812 ZNF815PA8K554 130 aa11.44□□□□□ -0.58
ARHGEF1-217ENST00000598812 S100A2P29034 98 aa11.44□□□□□ -0.58
ARHGEF1-217ENST00000598812 HIST3H2BBQ8N257 126 aa11.44□□□□□ -0.58
ARHGEF1-217ENST00000598812 EIF4EBP3O60516 100 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms