RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PLA2G2DQ9UNK4 145 aa13.85□□□□□ -0.19
CHMP2A-204ENST00000597848 C22orf24Q9Y442 160 aa13.85□□□□□ -0.19
CHMP2A-204ENST00000597848 PYY3Q5JQD4 70 aa13.84□□□□□ -0.19
CHMP2A-204ENST00000597848 ADAMTSL4-AS1Q5T5F5 129 aa13.84□□□□□ -0.19
CHMP2A-204ENST00000597848 Q5VSD8 79 aa13.84□□□□□ -0.19
CHMP2A-204ENST00000597848 VAMP8Q9BV40 100 aa13.84□□□□□ -0.19
CHMP2A-204ENST00000597848 KRTAP17-1Q9BYP8 105 aa13.84□□□□□ -0.19
CHMP2A-204ENST00000597848 TIMM17BO60830 172 aa13.83□□□□□ -0.2
CHMP2A-204ENST00000597848 RPL24P83731 157 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-204ENST00000597848 NKAPP1Q8N9T2 125 aa13.83□□□□□ -0.2
CHMP2A-204ENST00000597848 PAM16Q9Y3D7 125 aa13.83□□□□□ -0.2
CHMP2A-204ENST00000597848 BOD1L2Q8IYS8 172 aa13.82□□□□□ -0.2
CHMP2A-204ENST00000597848 PLA2G1BP04054 148 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-204ENST00000597848 RPL37AP61513 92 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-204ENST00000597848 SPATA45Q537H7 98 aa13.81□□□□□ -0.2
CHMP2A-204ENST00000597848 LBHQ53QV2 105 aaPredicted RBP13.81□□□□□ -0.2
CHMP2A-204ENST00000597848 MIEN1Q9BRT3 115 aa13.81□□□□□ -0.2
CHMP2A-204ENST00000597848 HSPG2P98160 4391 aa13.81□□□□□ -0.2
CHMP2A-204ENST00000597848 NPC2P61916 151 aa13.8□□□□□ -0.2
CHMP2A-204ENST00000597848 UBE2BP63146 152 aa13.8□□□□□ -0.2
CHMP2A-204ENST00000597848 LITAFQ99732 161 aa13.8□□□□□ -0.2
CHMP2A-204ENST00000597848 IGLV5-37A0A075B6J1 123 aa13.79□□□□□ -0.2
CHMP2A-204ENST00000597848 VPREB1P12018 145 aa13.79□□□□□ -0.2
CHMP2A-204ENST00000597848 MRPL55Q7Z7F7 128 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-204ENST00000597848 TP73-AS1Q9UF72 201 aa13.79□□□□□ -0.2
CHMP2A-204ENST00000597848 TMEM238C9JI98 176 aa13.78□□□□□ -0.2
CHMP2A-204ENST00000597848 GAGE10A6NGK3 116 aa13.77□□□□□ -0.21
CHMP2A-204ENST00000597848 Q8NDZ9 215 aa13.77□□□□□ -0.21
CHMP2A-204ENST00000597848 COX8AP10176 69 aa13.76□□□□□ -0.21
CHMP2A-204ENST00000597848 HERC2O95714 4834 aa13.75□□□□□ -0.21
CHMP2A-204ENST00000597848 LOC107984156A0A0G2JMH3 177 aa13.75□□□□□ -0.21
CHMP2A-204ENST00000597848 ARL17AQ8IVW1 177 aa13.75□□□□□ -0.21
CHMP2A-204ENST00000597848 C14orf144Q96I85 54 aa13.75□□□□□ -0.21
CHMP2A-204ENST00000597848 LINC00167Q96N53 147 aa13.75□□□□□ -0.21
CHMP2A-204ENST00000597848 PRR3P79522 188 aaKnown RBP13.74□□□□□ -0.21
CHMP2A-204ENST00000597848 SOSTDC1Q6X4U4 206 aa13.74□□□□□ -0.21
CHMP2A-204ENST00000597848 LINC00308Q8TCZ7 52 aa13.74□□□□□ -0.21
CHMP2A-204ENST00000597848 RPL37AP8A6NKH3 93 aa13.73□□□□□ -0.21
CHMP2A-204ENST00000597848 KRTAP11-1Q8IUC1 163 aa13.73□□□□□ -0.21
CHMP2A-204ENST00000597848 NCR3O14931 201 aa13.72□□□□□ -0.21
CHMP2A-204ENST00000597848 EIF4EBP3O60516 100 aaPredicted RBP13.72□□□□□ -0.21
CHMP2A-204ENST00000597848 SPANXDQ9BXN6 97 aa13.72□□□□□ -0.21
CHMP2A-204ENST00000597848 KRTAP4-5Q9BYR2 181 aa13.72□□□□□ -0.21
CHMP2A-204ENST00000597848 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
CHMP2A-204ENST00000597848 PSORS1C2Q9UIG4 136 aa13.72□□□□□ -0.21
CHMP2A-204ENST00000597848 M0R378 163 aa13.71□□□□□ -0.21
CHMP2A-204ENST00000597848 DLEU1O43261 78 aa13.7□□□□□ -0.22
CHMP2A-204ENST00000597848 S100A12P80511 92 aa13.7□□□□□ -0.22
CHMP2A-204ENST00000597848 SRSF9Q13242 221 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHMP2A-204ENST00000597848 C1orf137Q5JT78 98 aa13.69□□□□□ -0.22
CHMP2A-204ENST00000597848 SLC25A34Q6PIV7 304 aa13.69□□□□□ -0.22
CHMP2A-204ENST00000597848 Q6ZVH6 145 aa13.69□□□□□ -0.22
CHMP2A-204ENST00000597848 COPS9Q8WXC6 57 aa13.69□□□□□ -0.22
CHMP2A-204ENST00000597848 IGKV2-28A0A075B6P5 120 aa13.68□□□□□ -0.22
CHMP2A-204ENST00000597848 IGKV2D-28P01615 120 aa13.68□□□□□ -0.22
CHMP2A-204ENST00000597848 IFITM1P13164 125 aa13.68□□□□□ -0.22
CHMP2A-204ENST00000597848 KRTAP10-4P60372 401 aaPredicted RBP13.68□□□□□ -0.22
CHMP2A-204ENST00000597848 NDUFC2O95298 119 aa13.67□□□□□ -0.22
CHMP2A-204ENST00000597848 MUSTN1Q8IVN3 82 aa13.66□□□□□ -0.22
CHMP2A-204ENST00000597848 SPANXB1Q9NS25 103 aaPredicted RBP13.66□□□□□ -0.22
CHMP2A-204ENST00000597848 IGLV1-50A0A075B6I6 118 aa13.65□□□□□ -0.22
CHMP2A-204ENST00000597848 LOC105371267A0A1B0GV96 52 aa13.65□□□□□ -0.22
CHMP2A-204ENST00000597848 TRBV10-2A0A0K0K1G8 114 aa13.64□□□□□ -0.23
CHMP2A-204ENST00000597848 FAT1Q14517 4588 aa13.64□□□□□ -0.23
CHMP2A-204ENST00000597848 S100A7L2Q5SY68 101 aa13.62□□□□□ -0.23
CHMP2A-204ENST00000597848 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
CHMP2A-204ENST00000597848 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
CHMP2A-204ENST00000597848 TRBV10-3A0A0K0K1G6 114 aa13.6□□□□□ -0.23
CHMP2A-204ENST00000597848 SMIM6P0DI80 62 aa13.6□□□□□ -0.23
CHMP2A-204ENST00000597848 DDTP30046 118 aa13.6□□□□□ -0.23
CHMP2A-204ENST00000597848 PPDPFQ9H3Y8 114 aa13.6□□□□□ -0.23
CHMP2A-204ENST00000597848 IGLV7-43P04211 117 aa13.59□□□□□ -0.23
CHMP2A-204ENST00000597848 LINC00518Q8N0U6 118 aa13.59□□□□□ -0.23
CHMP2A-204ENST00000597848 HIGD1BQ9P298 99 aa13.59□□□□□ -0.23
CHMP2A-204ENST00000597848 HNRNPA3P51991 378 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-204ENST00000597848 REG3GQ6UW15 175 aa13.58□□□□□ -0.24
CHMP2A-204ENST00000597848 OR13C6PQ8NH95 151 aa13.58□□□□□ -0.24
CHMP2A-204ENST00000597848 BCE1O60756 84 aa13.57□□□□□ -0.24
CHMP2A-204ENST00000597848 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
CHMP2A-204ENST00000597848 SRRM2Q9UQ35 2752 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-204ENST00000597848 C2orf91Q6ZV80 131 aa13.56□□□□□ -0.24
CHMP2A-204ENST00000597848 VPS13BQ7Z7G8 4022 aa13.55□□□□□ -0.24
CHMP2A-204ENST00000597848 PRYO14603 147 aa13.54□□□□□ -0.24
CHMP2A-204ENST00000597848 IGLV6-57P01721 117 aa13.54□□□□□ -0.24
CHMP2A-204ENST00000597848 KCNQ1DNQ9H478 68 aa13.54□□□□□ -0.24
CHMP2A-204ENST00000597848 UQCR10Q9UDW1 63 aa13.54□□□□□ -0.24
CHMP2A-204ENST00000597848 A4D1N5 150 aa13.52□□□□□ -0.25
CHMP2A-204ENST00000597848 UBE2AP49459 152 aa13.52□□□□□ -0.25
CHMP2A-204ENST00000597848 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.25
CHMP2A-204ENST00000597848 FAM19A1Q7Z5A9 133 aa13.52□□□□□ -0.25
CHMP2A-204ENST00000597848 LINC00337Q8N6G1 96 aa13.51□□□□□ -0.25
CHMP2A-204ENST00000597848 PRO1933Q9H354 126 aa13.51□□□□□ -0.25
CHMP2A-204ENST00000597848 A6NDN8 102 aa13.5□□□□□ -0.25
CHMP2A-204ENST00000597848 RPL28P46779 137 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-204ENST00000597848 TRAV23DV6A0A075B6W5 121 aa13.49□□□□□ -0.25
CHMP2A-204ENST00000597848 ZNF861PO60384 105 aa13.49□□□□□ -0.25
CHMP2A-204ENST00000597848 TAL2Q16559 108 aa13.49□□□□□ -0.25
CHMP2A-204ENST00000597848 CBY1Q9Y3M2 126 aa13.49□□□□□ -0.25
CHMP2A-204ENST00000597848 TRAV13-2A0A0B4J235 113 aa13.47□□□□□ -0.25
CHMP2A-204ENST00000597848 ETDCA0A1B0GVM5 59 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 555.3 ms