RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
SH2D3A-207ENST00000597687 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
SH2D3A-207ENST00000597687 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
SH2D3A-207ENST00000597687 ZNF625Q96I27 306 aaPredicted RBP8.43□□□□□ -1.06
SH2D3A-207ENST00000597687 LINC01547P58512 204 aaPredicted RBP8.42□□□□□ -1.06
SH2D3A-207ENST00000597687 LINC00158P58513 81 aa8.42□□□□□ -1.06
SH2D3A-207ENST00000597687 FABP9Q0Z7S8 132 aa8.42□□□□□ -1.06
SH2D3A-207ENST00000597687 TMEM170BQ5T4T1 132 aa8.42□□□□□ -1.06
SH2D3A-207ENST00000597687 C3orf22Q8N5N4 141 aa8.42□□□□□ -1.06
SH2D3A-207ENST00000597687 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
SH2D3A-207ENST00000597687 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
SH2D3A-207ENST00000597687 PRYO14603 147 aa8.4□□□□□ -1.06
SH2D3A-207ENST00000597687 HBDP02042 147 aa8.4□□□□□ -1.06
SH2D3A-207ENST00000597687 SEC61BP60468 96 aaKnown RBP8.4□□□□□ -1.06
SH2D3A-207ENST00000597687 CLLU1Q5K131 121 aa8.4□□□□□ -1.06
SH2D3A-207ENST00000597687 SEC11CQ9BY50 192 aa8.4□□□□□ -1.06
SH2D3A-207ENST00000597687 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
SH2D3A-207ENST00000597687 SPINK1P00995 79 aa8.39□□□□□ -1.07
SH2D3A-207ENST00000597687 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
SH2D3A-207ENST00000597687 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
SH2D3A-207ENST00000597687 Q8NBF4 154 aa8.38□□□□□ -1.07
SH2D3A-207ENST00000597687 LINC00587B1AMM8 73 aa8.37□□□□□ -1.07
SH2D3A-207ENST00000597687 MEIG1Q5JSS6 88 aa8.37□□□□□ -1.07
SH2D3A-207ENST00000597687 DAND5Q8N907 189 aa8.37□□□□□ -1.07
SH2D3A-207ENST00000597687 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
SH2D3A-207ENST00000597687 BOD1L2Q8IYS8 172 aa8.35□□□□□ -1.07
SH2D3A-207ENST00000597687 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
SH2D3A-207ENST00000597687 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
SH2D3A-207ENST00000597687 LINC00614P0C842 121 aa8.34□□□□□ -1.07
SH2D3A-207ENST00000597687 ASB16-AS1Q495Z4 193 aa8.34□□□□□ -1.07
SH2D3A-207ENST00000597687 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
SH2D3A-207ENST00000597687 C11orf86A6NJI1 115 aa8.33□□□□□ -1.08
SH2D3A-207ENST00000597687 NCR3O14931 201 aa8.33□□□□□ -1.08
SH2D3A-207ENST00000597687 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
SH2D3A-207ENST00000597687 HERV-K104P63124 156 aa8.32□□□□□ -1.08
SH2D3A-207ENST00000597687 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
SH2D3A-207ENST00000597687 S100A1P23297 94 aa8.31□□□□□ -1.08
SH2D3A-207ENST00000597687 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
SH2D3A-207ENST00000597687 RHEBQ15382 184 aa8.31□□□□□ -1.08
SH2D3A-207ENST00000597687 TRAPPC1Q9Y5R8 145 aa8.31□□□□□ -1.08
SH2D3A-207ENST00000597687 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
SH2D3A-207ENST00000597687 SLC25A20O43772 301 aa8.3□□□□□ -1.08
SH2D3A-207ENST00000597687 GAGE2AQ6NT46 116 aa8.3□□□□□ -1.08
SH2D3A-207ENST00000597687 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
SH2D3A-207ENST00000597687 RPS10P5Q9NQ39 176 aa8.3□□□□□ -1.08
SH2D3A-207ENST00000597687 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
SH2D3A-207ENST00000597687 MOBPQ13875 183 aa8.29□□□□□ -1.08
SH2D3A-207ENST00000597687 PMCHL1Q16048 86 aa8.29□□□□□ -1.08
SH2D3A-207ENST00000597687 SLC7A5P1Q8MH63 180 aa8.29□□□□□ -1.08
SH2D3A-207ENST00000597687 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
SH2D3A-207ENST00000597687 MIEN1Q9BRT3 115 aa8.29□□□□□ -1.08
SH2D3A-207ENST00000597687 KCNQ1DNQ9H478 68 aa8.29□□□□□ -1.08
SH2D3A-207ENST00000597687 Q8NDZ9 215 aa8.28□□□□□ -1.08
SH2D3A-207ENST00000597687 A0A096LNJ9 63 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 COMMD7Q86VX2 200 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
SH2D3A-207ENST00000597687 SPRR1AP35321 89 aa8.26□□□□□ -1.09
SH2D3A-207ENST00000597687 JOSD1Q15040 202 aaPredicted RBP8.26□□□□□ -1.09
SH2D3A-207ENST00000597687 TRAV12-1A0A0B4J245 112 aa8.25□□□□□ -1.09
SH2D3A-207ENST00000597687 TRBV10-3A0A0K0K1G6 114 aa8.25□□□□□ -1.09
SH2D3A-207ENST00000597687 DDTP30046 118 aa8.24□□□□□ -1.09
SH2D3A-207ENST00000597687 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
SH2D3A-207ENST00000597687 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
SH2D3A-207ENST00000597687 CBY1Q9Y3M2 126 aa8.24□□□□□ -1.09
SH2D3A-207ENST00000597687 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
SH2D3A-207ENST00000597687 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
SH2D3A-207ENST00000597687 HINT1P49773 126 aaPredicted RBP8.21□□□□□ -1.1
SH2D3A-207ENST00000597687 Q6ZRX8 168 aa8.21□□□□□ -1.1
SH2D3A-207ENST00000597687 Q8N377 158 aa8.21□□□□□ -1.1
SH2D3A-207ENST00000597687 LIMD2Q9BT23 127 aa8.21□□□□□ -1.1
SH2D3A-207ENST00000597687 SPANXB1Q9NS25 103 aaPredicted RBP8.21□□□□□ -1.1
SH2D3A-207ENST00000597687 B5MCH6 92 aa8.2□□□□□ -1.1
SH2D3A-207ENST00000597687 HERVK_113P61574 105 aa8.2□□□□□ -1.1
SH2D3A-207ENST00000597687 URB1-AS1Q96HZ7 61 aa8.2□□□□□ -1.1
SH2D3A-207ENST00000597687 KRTAP4-16G5E9R7 235 aaPredicted RBP8.19□□□□□ -1.1
SH2D3A-207ENST00000597687 HSBP1O75506 76 aa8.19□□□□□ -1.1
SH2D3A-207ENST00000597687 SLC25A34Q6PIV7 304 aa8.19□□□□□ -1.1
SH2D3A-207ENST00000597687 H0Y8G0 127 aa8.18□□□□□ -1.1
SH2D3A-207ENST00000597687 TRAV23DV6A0A075B6W5 121 aa8.17□□□□□ -1.1
SH2D3A-207ENST00000597687 C10orf91Q5T1B1 145 aa8.17□□□□□ -1.1
SH2D3A-207ENST00000597687 XP32Q5T750 250 aa8.17□□□□□ -1.1
SH2D3A-207ENST00000597687 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
SH2D3A-207ENST00000597687 SNAPINO95295 136 aa8.16□□□□□ -1.1
SH2D3A-207ENST00000597687 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
SH2D3A-207ENST00000597687 PLNP26678 52 aa8.16□□□□□ -1.1
SH2D3A-207ENST00000597687 NMUP48645 174 aa8.16□□□□□ -1.1
SH2D3A-207ENST00000597687 LEPROTO15243 131 aa8.14□□□□□ -1.11
SH2D3A-207ENST00000597687 CFC1BP0CG36 223 aa8.14□□□□□ -1.11
SH2D3A-207ENST00000597687 SVBPQ8N300 66 aa8.14□□□□□ -1.11
SH2D3A-207ENST00000597687 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
SH2D3A-207ENST00000597687 ERC2-IT1O76042 136 aa8.13□□□□□ -1.11
SH2D3A-207ENST00000597687 NDUFC2O95298 119 aa8.13□□□□□ -1.11
SH2D3A-207ENST00000597687 Q9BRP9 147 aa8.13□□□□□ -1.11
SH2D3A-207ENST00000597687 LOC107984156A0A0G2JMH3 177 aa8.12□□□□□ -1.11
SH2D3A-207ENST00000597687 ZNF73O43830 326 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms