RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 K7EN84 100 aa3.87□□□□□ -1.79
LINC00343-204ENST00000596398 Q6ZN92 141 aa3.87□□□□□ -1.79
LINC00343-204ENST00000596398 SMIM12Q96EX1 92 aa3.87□□□□□ -1.79
LINC00343-204ENST00000596398 TMEM191AQ9H0A3 160 aa3.87□□□□□ -1.79
LINC00343-204ENST00000596398 ZNF706Q9Y5V0 76 aaPredicted RBP3.87□□□□□ -1.79
LINC00343-204ENST00000596398 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
LINC00343-204ENST00000596398 IGLV6-57P01721 117 aa3.86□□□□□ -1.79
LINC00343-204ENST00000596398 GIPP09681 153 aaPredicted RBP3.86□□□□□ -1.79
LINC00343-204ENST00000596398 DSCR10P59022 87 aa3.86□□□□□ -1.79
LINC00343-204ENST00000596398 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
LINC00343-204ENST00000596398 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
LINC00343-204ENST00000596398 LINC01561Q8N1V8 128 aa3.86□□□□□ -1.79
LINC00343-204ENST00000596398 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
LINC00343-204ENST00000596398 IGLV4-3A0A075B6K6 122 aa3.85□□□□□ -1.79
LINC00343-204ENST00000596398 RPL37P61927 97 aaKnown RBP3.85□□□□□ -1.79
LINC00343-204ENST00000596398 NOTCH2NLQ7Z3S9 236 aa3.85□□□□□ -1.79
LINC00343-204ENST00000596398 BIN3Q9NQY0 253 aa3.85□□□□□ -1.79
LINC00343-204ENST00000596398 FXYD6-FXYD2A0A087WZ82 144 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 TCAPO15273 167 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 LINC00483Q53H64 154 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 FAM231DQ6ZW35 169 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 Q75L30 129 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 SSBP3-AS1Q7Z2R9 100 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 LINC01551Q86U37 167 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 Q8NDZ9 215 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 SMCR5Q8TEV8 140 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 TIMM17AQ99595 171 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 GEMIN7Q9H840 131 aaKnown RBP3.84□□□□□ -1.79
LINC00343-204ENST00000596398 MED9Q9NWA0 146 aa3.84□□□□□ -1.79
LINC00343-204ENST00000596398 MDN1Q9NU22 5596 aa3.84□□□□□ -1.8
LINC00343-204ENST00000596398 KMT2DO14686 5537 aa3.83□□□□□ -1.8
LINC00343-204ENST00000596398 A0A1B0GUT8 65 aa3.83□□□□□ -1.8
LINC00343-204ENST00000596398 PPP1R2P9O14990 202 aa3.83□□□□□ -1.8
LINC00343-204ENST00000596398 IFITM3Q01628 133 aa3.83□□□□□ -1.8
LINC00343-204ENST00000596398 TMEM141Q96I45 108 aa3.83□□□□□ -1.8
LINC00343-204ENST00000596398 MANBALQ9NQG1 85 aa3.83□□□□□ -1.8
LINC00343-204ENST00000596398 SMIM1B2RUZ4 78 aa3.82□□□□□ -1.8
LINC00343-204ENST00000596398 GATCO43716 136 aaKnown RBP3.82□□□□□ -1.8
LINC00343-204ENST00000596398 PPP1R17O96001 155 aa3.82□□□□□ -1.8
LINC00343-204ENST00000596398 IFI27P40305 119 aaPredicted RBP3.82□□□□□ -1.8
LINC00343-204ENST00000596398 SEC61GP60059 68 aa3.82□□□□□ -1.8
LINC00343-204ENST00000596398 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
LINC00343-204ENST00000596398 TEX43Q6ZNM6 134 aa3.82□□□□□ -1.8
LINC00343-204ENST00000596398 BORCS7Q96B45 105 aa3.82□□□□□ -1.8
LINC00343-204ENST00000596398 EIF5A2Q9GZV4 153 aaKnown RBP3.82□□□□□ -1.8
LINC00343-204ENST00000596398 CDKN2A-AS1Q9UH64 79 aa3.82□□□□□ -1.8
LINC00343-204ENST00000596398 HIGD1CA8MV81 97 aa3.81□□□□□ -1.8
LINC00343-204ENST00000596398 A8MWL6 223 aa3.81□□□□□ -1.8
LINC00343-204ENST00000596398 RAB14P61106 215 aa3.81□□□□□ -1.8
LINC00343-204ENST00000596398 AKAP14Q86UN6 197 aa3.81□□□□□ -1.8
LINC00343-204ENST00000596398 C20orf78Q9BR46 151 aa3.81□□□□□ -1.8
LINC00343-204ENST00000596398 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
LINC00343-204ENST00000596398 PCP4L1A6NKN8 68 aa3.8□□□□□ -1.8
LINC00343-204ENST00000596398 PDE6DO43924 150 aa3.8□□□□□ -1.8
LINC00343-204ENST00000596398 CXCL5P42830 114 aa3.8□□□□□ -1.8
LINC00343-204ENST00000596398 FAM19A3Q7Z5A8 133 aa3.8□□□□□ -1.8
LINC00343-204ENST00000596398 C2orf88Q9BSF0 95 aa3.8□□□□□ -1.8
LINC00343-204ENST00000596398 PYGO1Q9Y3Y4 419 aa3.8□□□□□ -1.8
LINC00343-204ENST00000596398 TRBV24-1A0A075B6N3 115 aa3.79□□□□□ -1.8
LINC00343-204ENST00000596398 UMAD1C9J7I0 102 aa3.79□□□□□ -1.8
LINC00343-204ENST00000596398 HSBP1L1C9JCN9 74 aa3.79□□□□□ -1.8
LINC00343-204ENST00000596398 LGALS3P17931 250 aaKnown RBP3.79□□□□□ -1.8
LINC00343-204ENST00000596398 PFN2P35080 140 aa3.79□□□□□ -1.8
LINC00343-204ENST00000596398 HRCT1Q6UXD1 115 aa3.79□□□□□ -1.8
LINC00343-204ENST00000596398 COX7B2Q8TF08 81 aa3.79□□□□□ -1.8
LINC00343-204ENST00000596398 SND1-IT1Q9HBX3 110 aa3.79□□□□□ -1.8
LINC00343-204ENST00000596398 ARPC5O15511 151 aa3.78□□□□□ -1.8
LINC00343-204ENST00000596398 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
LINC00343-204ENST00000596398 CKS2P33552 79 aa3.78□□□□□ -1.8
LINC00343-204ENST00000596398 C9orf153Q5TBE3 101 aa3.78□□□□□ -1.8
LINC00343-204ENST00000596398 AMELXQ99217 191 aa3.78□□□□□ -1.8
LINC00343-204ENST00000596398 NPYP01303 97 aa3.77□□□□□ -1.81
LINC00343-204ENST00000596398 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
LINC00343-204ENST00000596398 RPL24P83731 157 aaKnown RBP3.77□□□□□ -1.81
LINC00343-204ENST00000596398 KIAA1644Q3SXP7 199 aa3.77□□□□□ -1.81
LINC00343-204ENST00000596398 FAM104BQ5XKR9 115 aa3.77□□□□□ -1.81
LINC00343-204ENST00000596398 C2orf66Q6UXQ4 117 aa3.77□□□□□ -1.81
LINC00343-204ENST00000596398 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
LINC00343-204ENST00000596398 IGLV5-45A0A087WSX0 123 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 C20orf202A1L168 122 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 D6R8Y8 96 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 TEX46H3BTG2 121 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 RAB5AP20339 215 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 HERVK_113P63121 156 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 RPS10P5Q9NQ39 176 aa3.76□□□□□ -1.81
LINC00343-204ENST00000596398 LOC389332A0A1B0GUA5 103 aa3.75□□□□□ -1.81
LINC00343-204ENST00000596398 LINC00862A6NCI5 91 aa3.75□□□□□ -1.81
LINC00343-204ENST00000596398 RIGQ13278 110 aa3.75□□□□□ -1.81
LINC00343-204ENST00000596398 UQCC3Q6UW78 93 aa3.75□□□□□ -1.81
LINC00343-204ENST00000596398 LIMD2Q9BT23 127 aa3.75□□□□□ -1.81
LINC00343-204ENST00000596398 ETDCA0A1B0GVM5 59 aa3.74□□□□□ -1.81
LINC00343-204ENST00000596398 SPINK8P0C7L1 97 aa3.74□□□□□ -1.81
LINC00343-204ENST00000596398 PDZD11Q5EBL8 140 aa3.74□□□□□ -1.81
LINC00343-204ENST00000596398 ATP5LO75964 103 aa3.73□□□□□ -1.81
LINC00343-204ENST00000596398 SPRR1AP35321 89 aa3.73□□□□□ -1.81
LINC00343-204ENST00000596398 S100ZQ8WXG8 99 aa3.73□□□□□ -1.81
LINC00343-204ENST00000596398 IGIPA6NJ69 53 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms