RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ZNF22P17026 224 aaPredicted RBP5.59□□□□□ -1.51
LIG1-209ENST00000596104 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
LIG1-209ENST00000596104 C4orf48Q5BLP8 95 aa5.59□□□□□ -1.51
LIG1-209ENST00000596104 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
LIG1-209ENST00000596104 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
LIG1-209ENST00000596104 ZNF706Q9Y5V0 76 aaPredicted RBP5.58□□□□□ -1.52
LIG1-209ENST00000596104 SPINK1P00995 79 aa5.57□□□□□ -1.52
LIG1-209ENST00000596104 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
LIG1-209ENST00000596104 TRAV9-1A0A075B6T8 112 aa5.56□□□□□ -1.52
LIG1-209ENST00000596104 A0A096LNJ9 63 aa5.56□□□□□ -1.52
LIG1-209ENST00000596104 SPRR1AP35321 89 aa5.56□□□□□ -1.52
LIG1-209ENST00000596104 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
LIG1-209ENST00000596104 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
LIG1-209ENST00000596104 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
LIG1-209ENST00000596104 SFTA2Q6UW10 78 aa5.55□□□□□ -1.52
LIG1-209ENST00000596104 C11orf86A6NJI1 115 aa5.54□□□□□ -1.52
LIG1-209ENST00000596104 PRYO14603 147 aa5.54□□□□□ -1.52
LIG1-209ENST00000596104 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
LIG1-209ENST00000596104 XP32Q5T750 250 aa5.54□□□□□ -1.52
LIG1-209ENST00000596104 Q8N377 158 aa5.54□□□□□ -1.52
LIG1-209ENST00000596104 SMCR5Q8TEV8 140 aa5.54□□□□□ -1.52
LIG1-209ENST00000596104 NDUFA6P56556 154 aa5.53□□□□□ -1.52
LIG1-209ENST00000596104 LINC00158P58513 81 aa5.53□□□□□ -1.52
LIG1-209ENST00000596104 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
LIG1-209ENST00000596104 SMCO4Q9NRQ5 59 aa5.53□□□□□ -1.52
LIG1-209ENST00000596104 URB1-AS1Q96HZ7 61 aa5.52□□□□□ -1.53
LIG1-209ENST00000596104 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
LIG1-209ENST00000596104 NDUFA12Q9UI09 145 aa5.52□□□□□ -1.53
LIG1-209ENST00000596104 A0A0U1RRA0 63 aa5.51□□□□□ -1.53
LIG1-209ENST00000596104 MOBPQ13875 183 aa5.51□□□□□ -1.53
LIG1-209ENST00000596104 TMEM170BQ5T4T1 132 aa5.51□□□□□ -1.53
LIG1-209ENST00000596104 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
LIG1-209ENST00000596104 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 NCR3O14931 201 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 ERC2-IT1O76042 136 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 MT1HP80294 61 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 FABP9Q0Z7S8 132 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 SSBP3-AS1Q7Z2R9 100 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 BAGE3Q86Y29 109 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 BOD1L2Q8IYS8 172 aa5.5□□□□□ -1.53
LIG1-209ENST00000596104 IGLV9-49A0A0B4J1Y8 123 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 SLC25A20O43772 301 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 HBDP02042 147 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 S100PP25815 95 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 PMCHL1Q16048 86 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 COX19Q49B96 90 aa5.49□□□□□ -1.53
LIG1-209ENST00000596104 TMEM223A0PJW6 202 aa5.48□□□□□ -1.53
LIG1-209ENST00000596104 TMEM218A2RU14 115 aa5.48□□□□□ -1.53
LIG1-209ENST00000596104 B5MCH6 92 aa5.48□□□□□ -1.53
LIG1-209ENST00000596104 LINC00614P0C842 121 aa5.48□□□□□ -1.53
LIG1-209ENST00000596104 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
LIG1-209ENST00000596104 C18orf32Q8TCD1 76 aa5.48□□□□□ -1.53
LIG1-209ENST00000596104 CLLU1Q5K131 121 aa5.47□□□□□ -1.53
LIG1-209ENST00000596104 Q9BRP9 147 aa5.47□□□□□ -1.53
LIG1-209ENST00000596104 SEC11CQ9BY50 192 aa5.46□□□□□ -1.54
LIG1-209ENST00000596104 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
LIG1-209ENST00000596104 ATP6V1G1O75348 118 aa5.45□□□□□ -1.54
LIG1-209ENST00000596104 CFC1BP0CG36 223 aa5.45□□□□□ -1.54
LIG1-209ENST00000596104 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
LIG1-209ENST00000596104 MEIG1Q5JSS6 88 aa5.45□□□□□ -1.54
LIG1-209ENST00000596104 UQCC3Q6UW78 93 aa5.45□□□□□ -1.54
LIG1-209ENST00000596104 HERV-K104P63124 156 aa5.44□□□□□ -1.54
LIG1-209ENST00000596104 Q6ZRX8 168 aa5.44□□□□□ -1.54
LIG1-209ENST00000596104 TRAV12-1A0A0B4J245 112 aa5.43□□□□□ -1.54
LIG1-209ENST00000596104 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
LIG1-209ENST00000596104 IGLV8-61A0A075B6I0 122 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 LOC107984156A0A0G2JMH3 177 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 TRBV10-2A0A0K0K1G8 114 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 LINC00587B1AMM8 73 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 DDTP30046 118 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
LIG1-209ENST00000596104 S100A12P80511 92 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 ARL17AQ8IVW1 177 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 TRAPPC1Q9Y5R8 145 aa5.42□□□□□ -1.54
LIG1-209ENST00000596104 C9orf153Q5TBE3 101 aa5.41□□□□□ -1.54
LIG1-209ENST00000596104 IFI27L1Q96BM0 104 aa5.41□□□□□ -1.54
LIG1-209ENST00000596104 MYMXA0A1B0GTQ4 84 aa5.4□□□□□ -1.54
LIG1-209ENST00000596104 RHEBQ15382 184 aa5.4□□□□□ -1.54
LIG1-209ENST00000596104 MAP1LC3CQ9BXW4 147 aa5.4□□□□□ -1.54
LIG1-209ENST00000596104 IGLV6-57P01721 117 aa5.39□□□□□ -1.55
LIG1-209ENST00000596104 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
LIG1-209ENST00000596104 C10orf91Q5T1B1 145 aa5.39□□□□□ -1.55
LIG1-209ENST00000596104 ST20-AS1Q8NBB2 130 aa5.39□□□□□ -1.55
LIG1-209ENST00000596104 RPS10P5Q9NQ39 176 aa5.39□□□□□ -1.55
LIG1-209ENST00000596104 SPANXB1Q9NS25 103 aaPredicted RBP5.39□□□□□ -1.55
LIG1-209ENST00000596104 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
LIG1-209ENST00000596104 NDUFC2O95298 119 aa5.37□□□□□ -1.55
LIG1-209ENST00000596104 JOSD1Q15040 202 aaPredicted RBP5.37□□□□□ -1.55
LIG1-209ENST00000596104 TRAV23DV6A0A075B6W5 121 aa5.36□□□□□ -1.55
LIG1-209ENST00000596104 C5orf52A6NGY3 159 aa5.36□□□□□ -1.55
LIG1-209ENST00000596104 SPRR1BP22528 89 aa5.36□□□□□ -1.55
LIG1-209ENST00000596104 IFITM2Q01629 132 aa5.36□□□□□ -1.55
LIG1-209ENST00000596104 CHCHD1Q96BP2 118 aaKnown RBP5.36□□□□□ -1.55
LIG1-209ENST00000596104 LIMD2Q9BT23 127 aa5.36□□□□□ -1.55
LIG1-209ENST00000596104 LEPROTO15243 131 aa5.35□□□□□ -1.55
LIG1-209ENST00000596104 ZNF73O43830 326 aaPredicted RBP5.35□□□□□ -1.55
LIG1-209ENST00000596104 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms