RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 SMR3BP02814 79 aaPredicted RBP13.33□□□□□ -0.28
SCN1B-203ENST00000595652 KRTAP7-1Q8IUC3 87 aa13.33□□□□□ -0.28
SCN1B-203ENST00000595652 BOD1L2Q8IYS8 172 aa13.33□□□□□ -0.28
SCN1B-203ENST00000595652 S100A12P80511 92 aa13.32□□□□□ -0.28
SCN1B-203ENST00000595652 TMEM238C9JI98 176 aa13.31□□□□□ -0.28
SCN1B-203ENST00000595652 PHF5AQ7RTV0 110 aaKnown RBP13.31□□□□□ -0.28
SCN1B-203ENST00000595652 RYR1P21817 5038 aa13.31□□□□□ -0.28
SCN1B-203ENST00000595652 M0QXV9 152 aa13.3□□□□□ -0.28
SCN1B-203ENST00000595652 SMIM6P0DI80 62 aa13.3□□□□□ -0.28
SCN1B-203ENST00000595652 Q8NDZ9 215 aa13.3□□□□□ -0.28
SCN1B-203ENST00000595652 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
SCN1B-203ENST00000595652 SOSTDC1Q6X4U4 206 aa13.29□□□□□ -0.28
SCN1B-203ENST00000595652 MIEN1Q9BRT3 115 aa13.29□□□□□ -0.28
SCN1B-203ENST00000595652 PLA2G2DQ9UNK4 145 aa13.29□□□□□ -0.28
SCN1B-203ENST00000595652 DLEU1O43261 78 aa13.28□□□□□ -0.28
SCN1B-203ENST00000595652 C22orf24Q9Y442 160 aa13.28□□□□□ -0.28
SCN1B-203ENST00000595652 KIAA1109Q2LD37 5005 aa13.28□□□□□ -0.28
SCN1B-203ENST00000595652 EPM2AB3EWF7 344 aa13.27□□□□□ -0.29
SCN1B-203ENST00000595652 EIF4EBP3O60516 100 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-203ENST00000595652 VPREB1P12018 145 aa13.27□□□□□ -0.29
SCN1B-203ENST00000595652 NKAPP1Q8N9T2 125 aa13.27□□□□□ -0.29
SCN1B-203ENST00000595652 SPANXDQ9BXN6 97 aa13.27□□□□□ -0.29
SCN1B-203ENST00000595652 SPANXCQ9NY87 97 aa13.27□□□□□ -0.29
SCN1B-203ENST00000595652 HSPG2P98160 4391 aa13.26□□□□□ -0.29
SCN1B-203ENST00000595652 RPL24P83731 157 aaKnown RBP13.26□□□□□ -0.29
SCN1B-203ENST00000595652 LINC00308Q8TCZ7 52 aa13.26□□□□□ -0.29
SCN1B-203ENST00000595652 LINC00528Q8N1L1 170 aa13.25□□□□□ -0.29
SCN1B-203ENST00000595652 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
SCN1B-203ENST00000595652 PRR3P79522 188 aaKnown RBP13.24□□□□□ -0.29
SCN1B-203ENST00000595652 IGLV5-37A0A075B6J1 123 aa13.23□□□□□ -0.29
SCN1B-203ENST00000595652 LOC107984156A0A0G2JMH3 177 aa13.23□□□□□ -0.29
SCN1B-203ENST00000595652 NCR3O14931 201 aa13.23□□□□□ -0.29
SCN1B-203ENST00000595652 SRSF9Q13242 221 aaKnown RBP eCLIP13.23□□□□□ -0.29
SCN1B-203ENST00000595652 ARL17AQ8IVW1 177 aa13.23□□□□□ -0.29
SCN1B-203ENST00000595652 C7orf33Q8WU49 177 aa13.23□□□□□ -0.29
SCN1B-203ENST00000595652 UBE2BP63146 152 aa13.22□□□□□ -0.29
SCN1B-203ENST00000595652 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
SCN1B-203ENST00000595652 MUSTN1Q8IVN3 82 aa13.22□□□□□ -0.29
SCN1B-203ENST00000595652 SPANXB1Q9NS25 103 aaPredicted RBP13.22□□□□□ -0.29
SCN1B-203ENST00000595652 LINC00167Q96N53 147 aa13.21□□□□□ -0.29
SCN1B-203ENST00000595652 PRO1933Q9H354 126 aa13.21□□□□□ -0.29
SCN1B-203ENST00000595652 LBHQ53QV2 105 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-203ENST00000595652 C2orf91Q6ZV80 131 aa13.2□□□□□ -0.3
SCN1B-203ENST00000595652 Q6ZVH6 145 aa13.2□□□□□ -0.3
SCN1B-203ENST00000595652 IFITM1P13164 125 aa13.19□□□□□ -0.3
SCN1B-203ENST00000595652 C12orf57Q99622 126 aa13.19□□□□□ -0.3
SCN1B-203ENST00000595652 RPL37AP8A6NKH3 93 aa13.18□□□□□ -0.3
SCN1B-203ENST00000595652 KRTAP11-1Q8IUC1 163 aa13.18□□□□□ -0.3
SCN1B-203ENST00000595652 HIST1H4GQ99525 98 aa13.18□□□□□ -0.3
SCN1B-203ENST00000595652 KRTAP17-1Q9BYP8 105 aa13.18□□□□□ -0.3
SCN1B-203ENST00000595652 HIGD1BQ9P298 99 aa13.18□□□□□ -0.3
SCN1B-203ENST00000595652 UQCR10Q9UDW1 63 aa13.18□□□□□ -0.3
SCN1B-203ENST00000595652 M0R378 163 aa13.17□□□□□ -0.3
SCN1B-203ENST00000595652 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
SCN1B-203ENST00000595652 NDUFC2O95298 119 aa13.16□□□□□ -0.3
SCN1B-203ENST00000595652 RPL37AP61513 92 aaKnown RBP13.16□□□□□ -0.3
SCN1B-203ENST00000595652 FAM229AH3BQW9 127 aa13.15□□□□□ -0.3
SCN1B-203ENST00000595652 Q8N1X5 172 aa13.15□□□□□ -0.3
SCN1B-203ENST00000595652 FAT1Q14517 4588 aa13.14□□□□□ -0.31
SCN1B-203ENST00000595652 IGKV2-28A0A075B6P5 120 aa13.14□□□□□ -0.31
SCN1B-203ENST00000595652 IGKV2D-28P01615 120 aa13.14□□□□□ -0.31
SCN1B-203ENST00000595652 Q5VSD8 79 aa13.14□□□□□ -0.31
SCN1B-203ENST00000595652 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
SCN1B-203ENST00000595652 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
SCN1B-203ENST00000595652 LINC00518Q8N0U6 118 aa13.11□□□□□ -0.31
SCN1B-203ENST00000595652 IGLV1-50A0A075B6I6 118 aa13.1□□□□□ -0.31
SCN1B-203ENST00000595652 HNRNPA3P51991 378 aaKnown RBP13.1□□□□□ -0.31
SCN1B-203ENST00000595652 PPDPFQ9H3Y8 114 aa13.1□□□□□ -0.31
SCN1B-203ENST00000595652 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
SCN1B-203ENST00000595652 PLA2G1BP04054 148 aaKnown RBP13.09□□□□□ -0.31
SCN1B-203ENST00000595652 C1orf137Q5JT78 98 aa13.09□□□□□ -0.31
SCN1B-203ENST00000595652 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
SCN1B-203ENST00000595652 OR13C6PQ8NH95 151 aa13.09□□□□□ -0.31
SCN1B-203ENST00000595652 HERC2O95714 4834 aa13.09□□□□□ -0.31
SCN1B-203ENST00000595652 A4D1N5 150 aa13.08□□□□□ -0.32
SCN1B-203ENST00000595652 DDTP30046 118 aa13.08□□□□□ -0.32
SCN1B-203ENST00000595652 TAL2Q16559 108 aa13.06□□□□□ -0.32
SCN1B-203ENST00000595652 LINC00337Q8N6G1 96 aa13.06□□□□□ -0.32
SCN1B-203ENST00000595652 CEND1Q8N111 149 aa13.05□□□□□ -0.32
SCN1B-203ENST00000595652 VPS13BQ7Z7G8 4022 aa13.04□□□□□ -0.32
SCN1B-203ENST00000595652 KRTAP10-4P60372 401 aaPredicted RBP13.04□□□□□ -0.32
SCN1B-203ENST00000595652 HSD52Q0P140 79 aa13.04□□□□□ -0.32
SCN1B-203ENST00000595652 TSTD3H0UI37 97 aa13.03□□□□□ -0.32
SCN1B-203ENST00000595652 IGLV6-57P01721 117 aa13.03□□□□□ -0.32
SCN1B-203ENST00000595652 REG3GQ6UW15 175 aa13.03□□□□□ -0.32
SCN1B-203ENST00000595652 A6NDN8 102 aa13.02□□□□□ -0.33
SCN1B-203ENST00000595652 PRYO14603 147 aa13.02□□□□□ -0.33
SCN1B-203ENST00000595652 KRTAP4-5Q9BYR2 181 aa13.02□□□□□ -0.33
SCN1B-203ENST00000595652 TMEM126AQ9H061 195 aa13.02□□□□□ -0.33
SCN1B-203ENST00000595652 KCNQ1DNQ9H478 68 aa13.01□□□□□ -0.33
SCN1B-203ENST00000595652 BCE1O60756 84 aa13□□□□□ -0.33
SCN1B-203ENST00000595652 FXYD2P54710 66 aa13□□□□□ -0.33
SCN1B-203ENST00000595652 TRAV23DV6A0A075B6W5 121 aa12.99□□□□□ -0.33
SCN1B-203ENST00000595652 IGLV7-43P04211 117 aa12.99□□□□□ -0.33
SCN1B-203ENST00000595652 TRAV13-2A0A0B4J235 113 aa12.98□□□□□ -0.33
SCN1B-203ENST00000595652 FAM19A1Q7Z5A9 133 aa12.98□□□□□ -0.33
SCN1B-203ENST00000595652 CTAG1AP78358 180 aa12.97□□□□□ -0.33
SCN1B-203ENST00000595652 TMEM238LA0A1B0GVL6 79 aa12.95□□□□□ -0.34
SCN1B-203ENST00000595652 A6NJY4 79 aa12.95□□□□□ -0.34
SCN1B-203ENST00000595652 CFC1BP0CG36 223 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms