RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SFTA2Q6UW10 78 aa6.65□□□□□ -1.34
SHKBP1-206ENST00000595523 PMCHL2Q9BQD1 86 aa6.65□□□□□ -1.34
SHKBP1-206ENST00000595523 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
SHKBP1-206ENST00000595523 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
SHKBP1-206ENST00000595523 RPL37AP8A6NKH3 93 aa6.64□□□□□ -1.35
SHKBP1-206ENST00000595523 VPREB1P12018 145 aa6.64□□□□□ -1.35
SHKBP1-206ENST00000595523 DIRC1Q969H9 104 aa6.64□□□□□ -1.35
SHKBP1-206ENST00000595523 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
SHKBP1-206ENST00000595523 PLNP26678 52 aa6.63□□□□□ -1.35
SHKBP1-206ENST00000595523 A0A0U1RRA0 63 aa6.62□□□□□ -1.35
SHKBP1-206ENST00000595523 DPM2O94777 84 aa6.62□□□□□ -1.35
SHKBP1-206ENST00000595523 NKAPP1Q8N9T2 125 aa6.62□□□□□ -1.35
SHKBP1-206ENST00000595523 LEPROTO15243 131 aa6.61□□□□□ -1.35
SHKBP1-206ENST00000595523 ZNF861PO60384 105 aa6.61□□□□□ -1.35
SHKBP1-206ENST00000595523 IGKCP01834 107 aa6.61□□□□□ -1.35
SHKBP1-206ENST00000595523 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
SHKBP1-206ENST00000595523 LINC00158P58513 81 aa6.61□□□□□ -1.35
SHKBP1-206ENST00000595523 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
SHKBP1-206ENST00000595523 IGKV2-28A0A075B6P5 120 aa6.6□□□□□ -1.35
SHKBP1-206ENST00000595523 BCE1O60756 84 aa6.6□□□□□ -1.35
SHKBP1-206ENST00000595523 IGKV2D-28P01615 120 aa6.6□□□□□ -1.35
SHKBP1-206ENST00000595523 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
SHKBP1-206ENST00000595523 MAP1LC3CQ9BXW4 147 aa6.6□□□□□ -1.35
SHKBP1-206ENST00000595523 LRP2P98164 4655 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 IGLV1-50A0A075B6I6 118 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 SYS1-DBNDD2H3BUS1 97 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 HERV-K104P63124 156 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 S100A12P80511 92 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 COA6Q5JTJ3 125 aaKnown RBP6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 PRR26Q8N8Z3 221 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 PLEKHB2Q96CS7 222 aa6.59□□□□□ -1.35
SHKBP1-206ENST00000595523 MYMXA0A1B0GTQ4 84 aa6.58□□□□□ -1.36
SHKBP1-206ENST00000595523 J3QQQ9 107 aa6.58□□□□□ -1.36
SHKBP1-206ENST00000595523 RPL24P83731 157 aaKnown RBP6.58□□□□□ -1.36
SHKBP1-206ENST00000595523 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
SHKBP1-206ENST00000595523 MIR7-3HGQ8N6C7 128 aa6.58□□□□□ -1.36
SHKBP1-206ENST00000595523 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
SHKBP1-206ENST00000595523 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
SHKBP1-206ENST00000595523 M0R378 163 aa6.56□□□□□ -1.36
SHKBP1-206ENST00000595523 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
SHKBP1-206ENST00000595523 HERVK_113P61574 105 aa6.56□□□□□ -1.36
SHKBP1-206ENST00000595523 DAND5Q8N907 189 aa6.56□□□□□ -1.36
SHKBP1-206ENST00000595523 TMEM126AQ9H061 195 aa6.56□□□□□ -1.36
SHKBP1-206ENST00000595523 E9PLD3 99 aa6.55□□□□□ -1.36
SHKBP1-206ENST00000595523 C3orf79P0CE67 100 aa6.55□□□□□ -1.36
SHKBP1-206ENST00000595523 NMUP48645 174 aa6.55□□□□□ -1.36
SHKBP1-206ENST00000595523 PET117Q6UWS5 81 aa6.55□□□□□ -1.36
SHKBP1-206ENST00000595523 BOD1L2Q8IYS8 172 aa6.55□□□□□ -1.36
SHKBP1-206ENST00000595523 LINC00518Q8N0U6 118 aa6.55□□□□□ -1.36
SHKBP1-206ENST00000595523 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
SHKBP1-206ENST00000595523 LINC00587B1AMM8 73 aa6.54□□□□□ -1.36
SHKBP1-206ENST00000595523 LGALS3P17931 250 aaKnown RBP6.54□□□□□ -1.36
SHKBP1-206ENST00000595523 PRLHP81277 87 aa6.54□□□□□ -1.36
SHKBP1-206ENST00000595523 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
SHKBP1-206ENST00000595523 NCR3O14931 201 aa6.53□□□□□ -1.36
SHKBP1-206ENST00000595523 UBE2AP49459 152 aa6.53□□□□□ -1.36
SHKBP1-206ENST00000595523 A0A087X002 238 aa6.52□□□□□ -1.37
SHKBP1-206ENST00000595523 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
SHKBP1-206ENST00000595523 A0A0J9YXY3 114 aa6.52□□□□□ -1.37
SHKBP1-206ENST00000595523 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
SHKBP1-206ENST00000595523 ADAMTSL4-AS1Q5T5F5 129 aa6.52□□□□□ -1.37
SHKBP1-206ENST00000595523 KRTDAPP60985 99 aa6.51□□□□□ -1.37
SHKBP1-206ENST00000595523 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
SHKBP1-206ENST00000595523 FAM19A1Q7Z5A9 133 aa6.51□□□□□ -1.37
SHKBP1-206ENST00000595523 ANAPC11Q9NYG5 84 aa6.51□□□□□ -1.37
SHKBP1-206ENST00000595523 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
SHKBP1-206ENST00000595523 SMIM6P0DI80 62 aa6.5□□□□□ -1.37
SHKBP1-206ENST00000595523 RPL13AP40429 203 aaKnown RBP6.5□□□□□ -1.37
SHKBP1-206ENST00000595523 LITAFQ99732 161 aa6.5□□□□□ -1.37
SHKBP1-206ENST00000595523 TTTY13Q9BZ97 58 aa6.5□□□□□ -1.37
SHKBP1-206ENST00000595523 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
SHKBP1-206ENST00000595523 PRYO14603 147 aa6.49□□□□□ -1.37
SHKBP1-206ENST00000595523 SPRR1AP35321 89 aa6.49□□□□□ -1.37
SHKBP1-206ENST00000595523 CTAG1AP78358 180 aa6.49□□□□□ -1.37
SHKBP1-206ENST00000595523 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
SHKBP1-206ENST00000595523 LPAP08519 4548 aa6.48□□□□□ -1.37
SHKBP1-206ENST00000595523 NPC2P61916 151 aa6.48□□□□□ -1.37
SHKBP1-206ENST00000595523 KRTAP13-2Q52LG2 175 aa6.48□□□□□ -1.37
SHKBP1-206ENST00000595523 HIST3H2BBQ8N257 126 aa6.48□□□□□ -1.37
SHKBP1-206ENST00000595523 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
SHKBP1-206ENST00000595523 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
SHKBP1-206ENST00000595523 C5orf52A6NGY3 159 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 ZNF815PA8K554 130 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 TIMM17BO60830 172 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 NDUFC2O95298 119 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 CRYGAP11844 174 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 ATOH7Q8N100 152 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 HIST1H2BLQ99880 126 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 HIGD2AQ9BW72 106 aa6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
SHKBP1-206ENST00000595523 IGLV6-57P01721 117 aa6.45□□□□□ -1.38
SHKBP1-206ENST00000595523 S100A6P06703 90 aa6.45□□□□□ -1.38
SHKBP1-206ENST00000595523 DDTP30046 118 aa6.45□□□□□ -1.38
SHKBP1-206ENST00000595523 FAM229BQ4G0N7 80 aa6.45□□□□□ -1.38
SHKBP1-206ENST00000595523 LINC00308Q8TCZ7 52 aa6.45□□□□□ -1.38
SHKBP1-206ENST00000595523 C20orf202A1L168 122 aa6.44□□□□□ -1.38
SHKBP1-206ENST00000595523 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms