RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
NOTCH3-203ENST00000595514 GAGE2BQ13066 116 aa6.23□□□□□ -1.41
NOTCH3-203ENST00000595514 A0A1W2PNN7 141 aa6.22□□□□□ -1.41
NOTCH3-203ENST00000595514 S100A6P06703 90 aa6.22□□□□□ -1.41
NOTCH3-203ENST00000595514 SNRPEP62304 92 aaKnown RBP6.22□□□□□ -1.41
NOTCH3-203ENST00000595514 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
NOTCH3-203ENST00000595514 SFTA2Q6UW10 78 aa6.22□□□□□ -1.41
NOTCH3-203ENST00000595514 KRTAP7-1Q8IUC3 87 aa6.22□□□□□ -1.41
NOTCH3-203ENST00000595514 LEPROTO15243 131 aa6.21□□□□□ -1.42
NOTCH3-203ENST00000595514 KRTDAPP60985 99 aa6.21□□□□□ -1.42
NOTCH3-203ENST00000595514 E9PLD3 99 aa6.2□□□□□ -1.42
NOTCH3-203ENST00000595514 GAGE2EQ4V326 116 aa6.2□□□□□ -1.42
NOTCH3-203ENST00000595514 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
NOTCH3-203ENST00000595514 GAGE2DQ9UEU5 116 aa6.2□□□□□ -1.42
NOTCH3-203ENST00000595514 ERG28Q9UKR5 140 aa6.2□□□□□ -1.42
NOTCH3-203ENST00000595514 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
NOTCH3-203ENST00000595514 J3QQQ9 107 aa6.19□□□□□ -1.42
NOTCH3-203ENST00000595514 S100A2P29034 98 aa6.19□□□□□ -1.42
NOTCH3-203ENST00000595514 HERVK_113P61574 105 aa6.19□□□□□ -1.42
NOTCH3-203ENST00000595514 COX17Q14061 63 aa6.19□□□□□ -1.42
NOTCH3-203ENST00000595514 HERV-K104P63124 156 aa6.18□□□□□ -1.42
NOTCH3-203ENST00000595514 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
NOTCH3-203ENST00000595514 IGKV2D-26A0A0A0MRZ7 120 aa6.17□□□□□ -1.42
NOTCH3-203ENST00000595514 C20orf202A1L168 122 aa6.17□□□□□ -1.42
NOTCH3-203ENST00000595514 NMUP48645 174 aa6.17□□□□□ -1.42
NOTCH3-203ENST00000595514 LINC01547P58512 204 aaPredicted RBP6.17□□□□□ -1.42
NOTCH3-203ENST00000595514 XAGE1AQ9HD64 81 aa6.17□□□□□ -1.42
NOTCH3-203ENST00000595514 IGLV1-50A0A075B6I6 118 aa6.16□□□□□ -1.42
NOTCH3-203ENST00000595514 MYMXA0A1B0GTQ4 84 aa6.16□□□□□ -1.42
NOTCH3-203ENST00000595514 PFN2P35080 140 aa6.16□□□□□ -1.42
NOTCH3-203ENST00000595514 AKR1D1P51857 326 aa6.16□□□□□ -1.42
NOTCH3-203ENST00000595514 C1orf137Q5JT78 98 aa6.16□□□□□ -1.42
NOTCH3-203ENST00000595514 DIRC1Q969H9 104 aa6.16□□□□□ -1.42
NOTCH3-203ENST00000595514 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
NOTCH3-203ENST00000595514 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
NOTCH3-203ENST00000595514 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
NOTCH3-203ENST00000595514 FAM19A5Q7Z5A7 132 aaPredicted RBP6.15□□□□□ -1.42
NOTCH3-203ENST00000595514 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
NOTCH3-203ENST00000595514 SND1-IT1Q9HBX3 110 aa6.15□□□□□ -1.42
NOTCH3-203ENST00000595514 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
NOTCH3-203ENST00000595514 SMIM13P0DJ93 91 aa6.14□□□□□ -1.43
NOTCH3-203ENST00000595514 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
NOTCH3-203ENST00000595514 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
NOTCH3-203ENST00000595514 Q8NDZ9 215 aa6.14□□□□□ -1.43
NOTCH3-203ENST00000595514 TP73-AS1Q9UF72 201 aa6.14□□□□□ -1.43
NOTCH3-203ENST00000595514 A0A0J9YXY3 114 aa6.13□□□□□ -1.43
NOTCH3-203ENST00000595514 LINC00587B1AMM8 73 aa6.13□□□□□ -1.43
NOTCH3-203ENST00000595514 M0QXV9 152 aa6.13□□□□□ -1.43
NOTCH3-203ENST00000595514 VPREB1P12018 145 aa6.13□□□□□ -1.43
NOTCH3-203ENST00000595514 MEIG1Q5JSS6 88 aa6.13□□□□□ -1.43
NOTCH3-203ENST00000595514 TTTY13Q9BZ97 58 aa6.13□□□□□ -1.43
NOTCH3-203ENST00000595514 LOC107984156A0A0G2JMH3 177 aa6.12□□□□□ -1.43
NOTCH3-203ENST00000595514 LINC00158P58513 81 aa6.12□□□□□ -1.43
NOTCH3-203ENST00000595514 ARL17AQ8IVW1 177 aa6.12□□□□□ -1.43
NOTCH3-203ENST00000595514 MIR7-3HGQ8N6C7 128 aa6.12□□□□□ -1.43
NOTCH3-203ENST00000595514 LITAFQ99732 161 aa6.12□□□□□ -1.43
NOTCH3-203ENST00000595514 C22orf24Q9Y442 160 aa6.12□□□□□ -1.43
NOTCH3-203ENST00000595514 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
NOTCH3-203ENST00000595514 TSPAN13O95857 204 aa6.11□□□□□ -1.43
NOTCH3-203ENST00000595514 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
NOTCH3-203ENST00000595514 RPL13AP40429 203 aaKnown RBP6.11□□□□□ -1.43
NOTCH3-203ENST00000595514 ZNF815PA8K554 130 aa6.1□□□□□ -1.43
NOTCH3-203ENST00000595514 H0Y9J4 135 aa6.1□□□□□ -1.43
NOTCH3-203ENST00000595514 TIMM17BO60830 172 aa6.1□□□□□ -1.43
NOTCH3-203ENST00000595514 ADAMTSL4-AS1Q5T5F5 129 aa6.1□□□□□ -1.43
NOTCH3-203ENST00000595514 MRPL55Q7Z7F7 128 aaKnown RBP6.1□□□□□ -1.43
NOTCH3-203ENST00000595514 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
NOTCH3-203ENST00000595514 TMA7Q9Y2S6 64 aaKnown RBP6.1□□□□□ -1.43
NOTCH3-203ENST00000595514 JOSD1Q15040 202 aaPredicted RBP6.09□□□□□ -1.43
NOTCH3-203ENST00000595514 SOSTDC1Q6X4U4 206 aa6.09□□□□□ -1.43
NOTCH3-203ENST00000595514 PCP2Q8IVA1 136 aa6.09□□□□□ -1.43
NOTCH3-203ENST00000595514 DAND5Q8N907 189 aa6.09□□□□□ -1.43
NOTCH3-203ENST00000595514 LINC00167Q96N53 147 aa6.09□□□□□ -1.43
NOTCH3-203ENST00000595514 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
NOTCH3-203ENST00000595514 SCGB1D1O95968 90 aa6.08□□□□□ -1.44
NOTCH3-203ENST00000595514 RPL24P83731 157 aaKnown RBP6.08□□□□□ -1.44
NOTCH3-203ENST00000595514 LBHQ53QV2 105 aaPredicted RBP6.08□□□□□ -1.44
NOTCH3-203ENST00000595514 KRTAP1-4P0C5Y4 121 aa6.07□□□□□ -1.44
NOTCH3-203ENST00000595514 NKAPP1Q8N9T2 125 aa6.07□□□□□ -1.44
NOTCH3-203ENST00000595514 UBE2BP63146 152 aa6.06□□□□□ -1.44
NOTCH3-203ENST00000595514 PYY3Q5JQD4 70 aa6.06□□□□□ -1.44
NOTCH3-203ENST00000595514 BOD1L2Q8IYS8 172 aa6.06□□□□□ -1.44
NOTCH3-203ENST00000595514 SPANXDQ9BXN6 97 aa6.06□□□□□ -1.44
NOTCH3-203ENST00000595514 SPANXCQ9NY87 97 aa6.06□□□□□ -1.44
NOTCH3-203ENST00000595514 HSBP1L1C9JCN9 74 aa6.05□□□□□ -1.44
NOTCH3-203ENST00000595514 NDUFC2O95298 119 aa6.05□□□□□ -1.44
NOTCH3-203ENST00000595514 LINC00308Q8TCZ7 52 aa6.05□□□□□ -1.44
NOTCH3-203ENST00000595514 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
NOTCH3-203ENST00000595514 GAGE10A6NGK3 116 aa6.04□□□□□ -1.44
NOTCH3-203ENST00000595514 RPL37AP8A6NKH3 93 aa6.04□□□□□ -1.44
NOTCH3-203ENST00000595514 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
NOTCH3-203ENST00000595514 M0R378 163 aa6.04□□□□□ -1.44
NOTCH3-203ENST00000595514 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
NOTCH3-203ENST00000595514 TMEM238C9JI98 176 aa6.03□□□□□ -1.44
NOTCH3-203ENST00000595514 COX8AP10176 69 aa6.03□□□□□ -1.44
NOTCH3-203ENST00000595514 CRYGAP11844 174 aa6.03□□□□□ -1.44
NOTCH3-203ENST00000595514 SCGB1D4Q6XE38 83 aa6.03□□□□□ -1.44
NOTCH3-203ENST00000595514 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
NOTCH3-203ENST00000595514 IGKV2-28A0A075B6P5 120 aa6.02□□□□□ -1.45
NOTCH3-203ENST00000595514 NCR3O14931 201 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms