RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 LINC01547P58512 204 aaPredicted RBP5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 JOSD1Q15040 202 aaPredicted RBP5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 PMVKQ15126 192 aa5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 TYMSOSQ8TAI1 123 aa5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 MRPL18Q9H0U6 180 aaKnown RBP5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BKO60814 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BJP06899 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BOP23527 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BBP33778 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BDP58876 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BCP62807 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST2H2BEQ16778 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BHQ93079 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BNQ99877 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST1H2BMQ99879 126 aa5.6□□□□□ -1.51
NOTCH3-202ENST00000595045 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
NOTCH3-202ENST00000595045 IGKV2-28A0A075B6P5 120 aa5.59□□□□□ -1.51
NOTCH3-202ENST00000595045 LINC01546A6NGU7 62 aa5.59□□□□□ -1.51
NOTCH3-202ENST00000595045 H3BRM9 83 aa5.59□□□□□ -1.51
NOTCH3-202ENST00000595045 IGKV2D-28P01615 120 aa5.59□□□□□ -1.51
NOTCH3-202ENST00000595045 UBE2AP49459 152 aa5.59□□□□□ -1.51
NOTCH3-202ENST00000595045 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
NOTCH3-202ENST00000595045 LINC01549A6NIU2 74 aa5.58□□□□□ -1.52
NOTCH3-202ENST00000595045 ATP5LO75964 103 aa5.58□□□□□ -1.52
NOTCH3-202ENST00000595045 PMCHL1Q16048 86 aa5.58□□□□□ -1.52
NOTCH3-202ENST00000595045 ZNF625Q96I27 306 aaPredicted RBP5.58□□□□□ -1.52
NOTCH3-202ENST00000595045 CBY1Q9Y3M2 126 aa5.58□□□□□ -1.52
NOTCH3-202ENST00000595045 IGLV5-37A0A075B6J1 123 aa5.57□□□□□ -1.52
NOTCH3-202ENST00000595045 LINC00614P0C842 121 aa5.57□□□□□ -1.52
NOTCH3-202ENST00000595045 COX19Q49B96 90 aa5.57□□□□□ -1.52
NOTCH3-202ENST00000595045 URB1-AS1Q96HZ7 61 aa5.57□□□□□ -1.52
NOTCH3-202ENST00000595045 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
NOTCH3-202ENST00000595045 A0A096LNJ9 63 aa5.56□□□□□ -1.52
NOTCH3-202ENST00000595045 IGLC3P0DOY3 106 aa5.56□□□□□ -1.52
NOTCH3-202ENST00000595045 ZNF22P17026 224 aaPredicted RBP5.56□□□□□ -1.52
NOTCH3-202ENST00000595045 PRLHP81277 87 aa5.56□□□□□ -1.52
NOTCH3-202ENST00000595045 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
NOTCH3-202ENST00000595045 HIST1H2BLQ99880 126 aa5.56□□□□□ -1.52
NOTCH3-202ENST00000595045 TRAPPC1Q9Y5R8 145 aa5.56□□□□□ -1.52
NOTCH3-202ENST00000595045 TMEM238C9JI98 176 aa5.55□□□□□ -1.52
NOTCH3-202ENST00000595045 FAM19A1Q7Z5A9 133 aa5.55□□□□□ -1.52
NOTCH3-202ENST00000595045 BAGE3Q86Y29 109 aa5.55□□□□□ -1.52
NOTCH3-202ENST00000595045 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
NOTCH3-202ENST00000595045 C18orf32Q8TCD1 76 aa5.55□□□□□ -1.52
NOTCH3-202ENST00000595045 SND1-IT1Q9HBX3 110 aa5.55□□□□□ -1.52
NOTCH3-202ENST00000595045 ERG28Q9UKR5 140 aa5.55□□□□□ -1.52
NOTCH3-202ENST00000595045 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 A0A0U1RRA0 63 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 A0A1B0GV90 55 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 M0R143 59 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 HBDP02042 147 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 TRGC2P03986 189 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 VPREB1P12018 145 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 FABP4P15090 132 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 TMEM170BQ5T4T1 132 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 Q8NDZ9 215 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 PPDPFQ9H3Y8 114 aa5.54□□□□□ -1.52
NOTCH3-202ENST00000595045 C11orf86A6NJI1 115 aa5.53□□□□□ -1.52
NOTCH3-202ENST00000595045 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
NOTCH3-202ENST00000595045 TMEM126AQ9H061 195 aa5.53□□□□□ -1.52
NOTCH3-202ENST00000595045 IGKV2D-26A0A0A0MRZ7 120 aa5.52□□□□□ -1.53
NOTCH3-202ENST00000595045 LINC00158P58513 81 aa5.52□□□□□ -1.53
NOTCH3-202ENST00000595045 C3orf22Q8N5N4 141 aa5.52□□□□□ -1.53
NOTCH3-202ENST00000595045 M0R378 163 aa5.51□□□□□ -1.53
NOTCH3-202ENST00000595045 ASB16-AS1Q495Z4 193 aa5.51□□□□□ -1.53
NOTCH3-202ENST00000595045 PLEKHB2Q96CS7 222 aa5.51□□□□□ -1.53
NOTCH3-202ENST00000595045 CHTOPQ9Y3Y2 248 aaKnown RBP5.51□□□□□ -1.53
NOTCH3-202ENST00000595045 DLEU1O43261 78 aa5.5□□□□□ -1.53
NOTCH3-202ENST00000595045 COX17Q14061 63 aa5.5□□□□□ -1.53
NOTCH3-202ENST00000595045 KRTAP13-3Q3SY46 172 aa5.5□□□□□ -1.53
NOTCH3-202ENST00000595045 HIGD2AQ9BW72 106 aa5.5□□□□□ -1.53
NOTCH3-202ENST00000595045 ANKRD39Q53RE8 183 aa5.49□□□□□ -1.53
NOTCH3-202ENST00000595045 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
NOTCH3-202ENST00000595045 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
NOTCH3-202ENST00000595045 TMEM223A0PJW6 202 aa5.47□□□□□ -1.53
NOTCH3-202ENST00000595045 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
NOTCH3-202ENST00000595045 LINC00337Q8N6G1 96 aa5.47□□□□□ -1.53
NOTCH3-202ENST00000595045 IFI27L1Q96BM0 104 aa5.47□□□□□ -1.53
NOTCH3-202ENST00000595045 MIEN1Q9BRT3 115 aa5.47□□□□□ -1.53
NOTCH3-202ENST00000595045 SNHG12Q9BXW3 62 aa5.47□□□□□ -1.53
NOTCH3-202ENST00000595045 PRO1933Q9H354 126 aa5.47□□□□□ -1.53
NOTCH3-202ENST00000595045 C20orf202A1L168 122 aa5.46□□□□□ -1.54
NOTCH3-202ENST00000595045 H0Y8G0 127 aa5.46□□□□□ -1.54
NOTCH3-202ENST00000595045 NCR3O14931 201 aa5.46□□□□□ -1.54
NOTCH3-202ENST00000595045 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
NOTCH3-202ENST00000595045 COL5A1-AS1Q5SY13 56 aa5.46□□□□□ -1.54
NOTCH3-202ENST00000595045 SFTA2Q6UW10 78 aa5.46□□□□□ -1.54
NOTCH3-202ENST00000595045 BOD1L2Q8IYS8 172 aa5.46□□□□□ -1.54
NOTCH3-202ENST00000595045 TRAV12-1A0A0B4J245 112 aa5.45□□□□□ -1.54
NOTCH3-202ENST00000595045 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
NOTCH3-202ENST00000595045 PET117Q6UWS5 81 aa5.45□□□□□ -1.54
NOTCH3-202ENST00000595045 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
NOTCH3-202ENST00000595045 FAM19A2Q8N3H0 131 aa5.45□□□□□ -1.54
NOTCH3-202ENST00000595045 MIR7-3HGQ8N6C7 128 aa5.45□□□□□ -1.54
NOTCH3-202ENST00000595045 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
NOTCH3-202ENST00000595045 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
NOTCH3-202ENST00000595045 DAND5Q8N907 189 aa5.44□□□□□ -1.54
NOTCH3-202ENST00000595045 SMCR5Q8TEV8 140 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms