RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 FABP4P15090 132 aa13.32□□□□□ -0.28
GTF2F1-204ENST00000594965 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
GTF2F1-204ENST00000594965 HSPB8Q9UJY1 196 aa13.31□□□□□ -0.28
GTF2F1-204ENST00000594965 SMIM13P0DJ93 91 aa13.3□□□□□ -0.28
GTF2F1-204ENST00000594965 TSPEAR-AS2P59090 65 aa13.29□□□□□ -0.28
GTF2F1-204ENST00000594965 NDUFA12Q9UI09 145 aa13.28□□□□□ -0.28
GTF2F1-204ENST00000594965 UBR4Q5T4S7 5183 aa13.28□□□□□ -0.28
GTF2F1-204ENST00000594965 TMEM238C9JI98 176 aa13.27□□□□□ -0.29
GTF2F1-204ENST00000594965 PMCHL2Q9BQD1 86 aa13.27□□□□□ -0.29
GTF2F1-204ENST00000594965 LEPROTO15243 131 aa13.26□□□□□ -0.29
GTF2F1-204ENST00000594965 PLNP26678 52 aa13.26□□□□□ -0.29
GTF2F1-204ENST00000594965 HERV-K104P63124 156 aa13.26□□□□□ -0.29
GTF2F1-204ENST00000594965 MEIG1Q5JSS6 88 aa13.26□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BKO60814 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 DPM2O94777 84 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BJP06899 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BOP23527 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BBP33778 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 RPL13AP40429 203 aaKnown RBP13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 UBE2AP49459 152 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BDP58876 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BCP62807 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST2H2BEQ16778 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 MIR7-3HGQ8N6C7 128 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BHQ93079 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BNQ99877 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 HIST1H2BMQ99879 126 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 TMEM126AQ9H061 195 aa13.25□□□□□ -0.29
GTF2F1-204ENST00000594965 M0R378 163 aa13.24□□□□□ -0.29
GTF2F1-204ENST00000594965 A0A087X002 238 aa13.23□□□□□ -0.29
GTF2F1-204ENST00000594965 MYMXA0A1B0GTQ4 84 aa13.23□□□□□ -0.29
GTF2F1-204ENST00000594965 IGKCP01834 107 aa13.23□□□□□ -0.29
GTF2F1-204ENST00000594965 PRLHP81277 87 aa13.23□□□□□ -0.29
GTF2F1-204ENST00000594965 LRP2P98164 4655 aa13.22□□□□□ -0.29
GTF2F1-204ENST00000594965 PLEKHB2Q96CS7 222 aa13.22□□□□□ -0.29
GTF2F1-204ENST00000594965 ATP6V1G1O75348 118 aa13.21□□□□□ -0.29
GTF2F1-204ENST00000594965 FAM19A1Q7Z5A9 133 aa13.21□□□□□ -0.29
GTF2F1-204ENST00000594965 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.29
GTF2F1-204ENST00000594965 LINC00587B1AMM8 73 aa13.2□□□□□ -0.3
GTF2F1-204ENST00000594965 J3QQQ9 107 aa13.2□□□□□ -0.3
GTF2F1-204ENST00000594965 BOD1L2Q8IYS8 172 aa13.2□□□□□ -0.3
GTF2F1-204ENST00000594965 ANAPC11Q9NYG5 84 aa13.19□□□□□ -0.3
GTF2F1-204ENST00000594965 HERVK_113P61574 105 aa13.18□□□□□ -0.3
GTF2F1-204ENST00000594965 CRYGAP11844 174 aa13.16□□□□□ -0.3
GTF2F1-204ENST00000594965 DAND5Q8N907 189 aa13.16□□□□□ -0.3
GTF2F1-204ENST00000594965 SYS1-DBNDD2H3BUS1 97 aa13.15□□□□□ -0.3
GTF2F1-204ENST00000594965 NCR3O14931 201 aa13.15□□□□□ -0.3
GTF2F1-204ENST00000594965 NMUP48645 174 aa13.15□□□□□ -0.3
GTF2F1-204ENST00000594965 LOC107984156A0A0G2JMH3 177 aa13.14□□□□□ -0.31
GTF2F1-204ENST00000594965 LGALS3P17931 250 aaKnown RBP13.14□□□□□ -0.31
GTF2F1-204ENST00000594965 KRTAP13-2Q52LG2 175 aa13.14□□□□□ -0.31
GTF2F1-204ENST00000594965 ARL17AQ8IVW1 177 aa13.14□□□□□ -0.31
GTF2F1-204ENST00000594965 IGKV2D-26A0A0A0MRZ7 120 aa13.12□□□□□ -0.31
GTF2F1-204ENST00000594965 E9PLD3 99 aa13.11□□□□□ -0.31
GTF2F1-204ENST00000594965 PRYO14603 147 aa13.11□□□□□ -0.31
GTF2F1-204ENST00000594965 FAM229BQ4G0N7 80 aa13.11□□□□□ -0.31
GTF2F1-204ENST00000594965 TYMSOSQ8TAI1 123 aa13.11□□□□□ -0.31
GTF2F1-204ENST00000594965 LPAP08519 4548 aa13.11□□□□□ -0.31
GTF2F1-204ENST00000594965 SPRR1AP35321 89 aa13.1□□□□□ -0.31
GTF2F1-204ENST00000594965 LINC01545Q5VT33 79 aa13.1□□□□□ -0.31
GTF2F1-204ENST00000594965 KCNQ1DNQ9H478 68 aa13.1□□□□□ -0.31
GTF2F1-204ENST00000594965 COA6Q5JTJ3 125 aaKnown RBP13.09□□□□□ -0.31
GTF2F1-204ENST00000594965 TRBV10-3A0A0K0K1G6 114 aa13.08□□□□□ -0.32
GTF2F1-204ENST00000594965 KRTAP4-16G5E9R7 235 aaPredicted RBP13.08□□□□□ -0.32
GTF2F1-204ENST00000594965 HIGD2AQ9BW72 106 aa13.08□□□□□ -0.32
GTF2F1-204ENST00000594965 A0A0J9YXY3 114 aa13.07□□□□□ -0.32
GTF2F1-204ENST00000594965 PET117Q6UWS5 81 aa13.07□□□□□ -0.32
GTF2F1-204ENST00000594965 ADAMTSL4-AS1Q5T5F5 129 aa13.06□□□□□ -0.32
GTF2F1-204ENST00000594965 LINC00337Q8N6G1 96 aa13.06□□□□□ -0.32
GTF2F1-204ENST00000594965 TSPAN13O95857 204 aa13.05□□□□□ -0.32
GTF2F1-204ENST00000594965 C3orf79P0CE67 100 aa13.05□□□□□ -0.32
GTF2F1-204ENST00000594965 SOSTDC1Q6X4U4 206 aa13.05□□□□□ -0.32
GTF2F1-204ENST00000594965 TRBV10-2A0A0K0K1G8 114 aa13.04□□□□□ -0.32
GTF2F1-204ENST00000594965 EIF4EBP3O60516 100 aaPredicted RBP13.04□□□□□ -0.32
GTF2F1-204ENST00000594965 SPRR4Q96PI1 79 aa13.02□□□□□ -0.33
GTF2F1-204ENST00000594965 NDUFC2O95298 119 aa13.01□□□□□ -0.33
GTF2F1-204ENST00000594965 NPC2P61916 151 aa13.01□□□□□ -0.33
GTF2F1-204ENST00000594965 DDTP30046 118 aa13□□□□□ -0.33
GTF2F1-204ENST00000594965 LITAFQ99732 161 aa13□□□□□ -0.33
GTF2F1-204ENST00000594965 MIEN1Q9BRT3 115 aa13□□□□□ -0.33
GTF2F1-204ENST00000594965 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
GTF2F1-204ENST00000594965 ETDCA0A1B0GVM5 59 aa12.99□□□□□ -0.33
GTF2F1-204ENST00000594965 PRR4Q16378 134 aa12.99□□□□□ -0.33
GTF2F1-204ENST00000594965 C3orf22Q8N5N4 141 aa12.99□□□□□ -0.33
GTF2F1-204ENST00000594965 SMCR5Q8TEV8 140 aa12.99□□□□□ -0.33
GTF2F1-204ENST00000594965 KRTDAPP60985 99 aa12.98□□□□□ -0.33
GTF2F1-204ENST00000594965 B5MCH6 92 aa12.97□□□□□ -0.33
GTF2F1-204ENST00000594965 IGLV6-57P01721 117 aa12.97□□□□□ -0.33
GTF2F1-204ENST00000594965 LINC00304Q8N9R0 145 aa12.97□□□□□ -0.33
GTF2F1-204ENST00000594965 TTTY13Q9BZ97 58 aa12.97□□□□□ -0.33
GTF2F1-204ENST00000594965 S100A12P80511 92 aa12.95□□□□□ -0.34
GTF2F1-204ENST00000594965 ZNF706Q9Y5V0 76 aaPredicted RBP12.94□□□□□ -0.34
GTF2F1-204ENST00000594965 ZNF815PA8K554 130 aa12.93□□□□□ -0.34
GTF2F1-204ENST00000594965 TIMM17BO60830 172 aa12.93□□□□□ -0.34
GTF2F1-204ENST00000594965 S100A7L2Q5SY68 101 aa12.93□□□□□ -0.34
GTF2F1-204ENST00000594965 ERC2-IT1O76042 136 aa12.92□□□□□ -0.34
GTF2F1-204ENST00000594965 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
GTF2F1-204ENST00000594965 Q9BRP9 147 aa12.91□□□□□ -0.34
GTF2F1-204ENST00000594965 Q6ZRX8 168 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms