RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SFTA2Q6UW10 78 aa8.67□□□□□ -1.02
PNKP-202ENST00000593706 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
PNKP-202ENST00000593706 Q8NDZ9 215 aa8.67□□□□□ -1.02
PNKP-202ENST00000593706 SND1-IT1Q9HBX3 110 aa8.67□□□□□ -1.02
PNKP-202ENST00000593706 VPREB1P12018 145 aa8.66□□□□□ -1.02
PNKP-202ENST00000593706 KRTAP9-2Q9BYQ4 174 aa8.66□□□□□ -1.02
PNKP-202ENST00000593706 GAGE10A6NGK3 116 aa8.65□□□□□ -1.02
PNKP-202ENST00000593706 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.02
PNKP-202ENST00000593706 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
PNKP-202ENST00000593706 UBE2AP49459 152 aa8.63□□□□□ -1.03
PNKP-202ENST00000593706 RETNLBQ9BQ08 111 aa8.63□□□□□ -1.03
PNKP-202ENST00000593706 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BKO60814 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BJP06899 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BOP23527 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BBP33778 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BDP58876 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BCP62807 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST2H2BEQ16778 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.61□□□□□ -1.03
PNKP-202ENST00000593706 LINC00304Q8N9R0 145 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BHQ93079 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BNQ99877 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 HIST1H2BMQ99879 126 aa8.61□□□□□ -1.03
PNKP-202ENST00000593706 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
PNKP-202ENST00000593706 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
PNKP-202ENST00000593706 IGKV2-28A0A075B6P5 120 aa8.59□□□□□ -1.03
PNKP-202ENST00000593706 H0Y8G0 127 aa8.59□□□□□ -1.03
PNKP-202ENST00000593706 IGKV2D-28P01615 120 aa8.59□□□□□ -1.03
PNKP-202ENST00000593706 TSPEAR-AS2P59090 65 aa8.59□□□□□ -1.03
PNKP-202ENST00000593706 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
PNKP-202ENST00000593706 CDIP1Q9H305 208 aa8.59□□□□□ -1.03
PNKP-202ENST00000593706 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
PNKP-202ENST00000593706 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
PNKP-202ENST00000593706 FABP4P15090 132 aa8.58□□□□□ -1.04
PNKP-202ENST00000593706 M0R378 163 aa8.57□□□□□ -1.04
PNKP-202ENST00000593706 PLNP26678 52 aa8.57□□□□□ -1.04
PNKP-202ENST00000593706 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
PNKP-202ENST00000593706 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
PNKP-202ENST00000593706 HSPB8Q9UJY1 196 aa8.57□□□□□ -1.04
PNKP-202ENST00000593706 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
PNKP-202ENST00000593706 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
PNKP-202ENST00000593706 LINC00158P58513 81 aa8.56□□□□□ -1.04
PNKP-202ENST00000593706 HERV-K104P63124 156 aa8.56□□□□□ -1.04
PNKP-202ENST00000593706 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
PNKP-202ENST00000593706 TMEM126AQ9H061 195 aa8.56□□□□□ -1.04
PNKP-202ENST00000593706 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
PNKP-202ENST00000593706 PRLHP81277 87 aa8.55□□□□□ -1.04
PNKP-202ENST00000593706 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
PNKP-202ENST00000593706 PMCHL2Q9BQD1 86 aa8.55□□□□□ -1.04
PNKP-202ENST00000593706 A0A0U1RRA0 63 aa8.54□□□□□ -1.04
PNKP-202ENST00000593706 LEPROTO15243 131 aa8.54□□□□□ -1.04
PNKP-202ENST00000593706 DPM2O94777 84 aa8.54□□□□□ -1.04
PNKP-202ENST00000593706 FAM19A1Q7Z5A9 133 aa8.54□□□□□ -1.04
PNKP-202ENST00000593706 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
PNKP-202ENST00000593706 MIR7-3HGQ8N6C7 128 aa8.53□□□□□ -1.04
PNKP-202ENST00000593706 MYMXA0A1B0GTQ4 84 aa8.52□□□□□ -1.05
PNKP-202ENST00000593706 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
PNKP-202ENST00000593706 J3QQQ9 107 aa8.51□□□□□ -1.05
PNKP-202ENST00000593706 ATP6V1G1O75348 118 aa8.51□□□□□ -1.05
PNKP-202ENST00000593706 IGKCP01834 107 aa8.51□□□□□ -1.05
PNKP-202ENST00000593706 MEIG1Q5JSS6 88 aa8.51□□□□□ -1.05
PNKP-202ENST00000593706 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
PNKP-202ENST00000593706 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
PNKP-202ENST00000593706 COA6Q5JTJ3 125 aaKnown RBP8.5□□□□□ -1.05
PNKP-202ENST00000593706 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
PNKP-202ENST00000593706 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
PNKP-202ENST00000593706 MAP1LC3CQ9BXW4 147 aa8.49□□□□□ -1.05
PNKP-202ENST00000593706 KRTAP4-16G5E9R7 235 aaPredicted RBP8.48□□□□□ -1.05
PNKP-202ENST00000593706 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
PNKP-202ENST00000593706 SPRR1AP35321 89 aa8.48□□□□□ -1.05
PNKP-202ENST00000593706 NMUP48645 174 aa8.48□□□□□ -1.05
PNKP-202ENST00000593706 CTAG1AP78358 180 aa8.48□□□□□ -1.05
PNKP-202ENST00000593706 DAND5Q8N907 189 aa8.48□□□□□ -1.05
PNKP-202ENST00000593706 NCR3O14931 201 aa8.47□□□□□ -1.05
PNKP-202ENST00000593706 S100A1P23297 94 aa8.47□□□□□ -1.05
PNKP-202ENST00000593706 HERVK_113P61574 105 aa8.47□□□□□ -1.05
PNKP-202ENST00000593706 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
PNKP-202ENST00000593706 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
PNKP-202ENST00000593706 PPDPFQ9H3Y8 114 aa8.47□□□□□ -1.05
PNKP-202ENST00000593706 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
PNKP-202ENST00000593706 A6NJY4 79 aa8.46□□□□□ -1.06
PNKP-202ENST00000593706 E9PLD3 99 aa8.46□□□□□ -1.06
PNKP-202ENST00000593706 PRYO14603 147 aa8.46□□□□□ -1.06
PNKP-202ENST00000593706 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
PNKP-202ENST00000593706 KRTAP9-6A0A140TA67 174 aa8.45□□□□□ -1.06
PNKP-202ENST00000593706 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
PNKP-202ENST00000593706 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
PNKP-202ENST00000593706 C3orf79P0CE67 100 aa8.44□□□□□ -1.06
PNKP-202ENST00000593706 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
PNKP-202ENST00000593706 LINC00337Q8N6G1 96 aa8.44□□□□□ -1.06
PNKP-202ENST00000593706 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
PNKP-202ENST00000593706 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
PNKP-202ENST00000593706 SPAG11AQ6PDA7 123 aa8.43□□□□□ -1.06
PNKP-202ENST00000593706 SOSTDC1Q6X4U4 206 aa8.43□□□□□ -1.06
PNKP-202ENST00000593706 ADAMTSL4-AS1Q5T5F5 129 aa8.42□□□□□ -1.06
PNKP-202ENST00000593706 PET117Q6UWS5 81 aa8.42□□□□□ -1.06
PNKP-202ENST00000593706 LITAFQ99732 161 aa8.42□□□□□ -1.06
PNKP-202ENST00000593706 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
PNKP-202ENST00000593706 SPANXB1Q9NS25 103 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms