RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 MPV17LQ2QL34 196 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 DEFB121Q5J5C9 76 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 S100A7L2Q5SY68 101 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 LINC01600Q96MT4 127 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 AMELYQ99218 206 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 ALMS1Q8TCU4 4167 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 SRRM2Q9UQ35 2752 aaKnown RBP2.73□□□□□ -1.97
SMAD4-216ENST00000593223 TRBV10-3A0A0K0K1G6 114 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 TCRBV4S1A1TA0A5B7 111 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 C16orf90A8MZG2 172 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 K7EIL1 84 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 ERC2-IT1O76042 136 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 KRTAP10-1P60331 282 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 WFDC2Q14508 124 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 SPATA45Q537H7 98 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 C18orf32Q8TCD1 76 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 NXT2Q9NPJ8 142 aaKnown RBP2.73□□□□□ -1.97
SMAD4-216ENST00000593223 MINOS1-NBL1R4GNA1 71 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 NUP214P35658 2090 aaPredicted RBP2.73□□□□□ -1.97
SMAD4-216ENST00000593223 HMCN2Q8NDA2 5059 aa2.73□□□□□ -1.97
SMAD4-216ENST00000593223 HUWE1Q7Z6Z7 4374 aaKnown RBP2.72□□□□□ -1.97
SMAD4-216ENST00000593223 A0A087WWC5 75 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 CRYM-AS1A6NIL9 109 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 ACYP1P07311 99 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 SMIM11AP58511 58 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 SNRPFP62306 86 aaKnown RBP2.72□□□□□ -1.97
SMAD4-216ENST00000593223 C2orf82Q6UX34 121 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 LYPD6Q86Y78 171 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 S4R3C0 116 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
SMAD4-216ENST00000593223 HSPG2P98160 4391 aa2.72□□□□□ -1.97
SMAD4-216ENST00000593223 IGHV3OR16-8A0A075B7F1 116 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 A0A087WXM4 84 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 TRBV7-1A0A0A6YYK4 115 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 TRAV13-2A0A0B4J235 113 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 TRAV10A0A0B4J240 114 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 H3BUT2 72 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 PSCAO43653 123 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 IGFL1Q6UW32 110 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 NDUFA11Q86Y39 141 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 LINC00474Q9P2X8 69 aa2.71□□□□□ -1.98
SMAD4-216ENST00000593223 ODF3BA8MYP8 253 aa2.7□□□□□ -1.98
SMAD4-216ENST00000593223 HCG22E2RYF7 251 aa2.7□□□□□ -1.98
SMAD4-216ENST00000593223 TIMM21Q9BVV7 248 aa2.7□□□□□ -1.98
SMAD4-216ENST00000593223 HIGD2AQ9BW72 106 aa2.7□□□□□ -1.98
SMAD4-216ENST00000593223 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
SMAD4-216ENST00000593223 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
SMAD4-216ENST00000593223 PKHD1P08F94 4074 aa2.7□□□□□ -1.98
SMAD4-216ENST00000593223 WNK2Q9Y3S1 2297 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 IGLV2-18A0A075B6J9 118 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 A0A0J9YX75 114 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 MUC21A0A140T8X8 626 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 C7orf77A4D0Y5 90 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 F2Z2F3 143 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 SIX6O95475 246 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 DEFB110Q30KQ9 67 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 CYP2G1PQ6ZSU1 146 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 LYPD1Q8N2G4 141 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 CMTM2Q8TAZ6 248 aa2.69□□□□□ -1.98
SMAD4-216ENST00000593223 FAT2Q9NYQ8 4349 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 DNAH11Q96DT5 4516 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 TRAV12-1A0A0B4J245 112 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 IGKV1-17P01599 117 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.68□□□□□ -1.98
SMAD4-216ENST00000593223 ZCCHC23Q6ZST2 131 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 LINC00643Q86TS7 51 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 COX14Q96I36 57 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 FAM167A-AS1Q96KT0 104 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 PSORS1C2Q9UIG4 136 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 C22orf24Q9Y442 160 aa2.68□□□□□ -1.98
SMAD4-216ENST00000593223 TRAV40A0A0B4J280 105 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 H7BZZ5 65 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 FREM3P0C091 2139 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 ASAH2BP0C7U1 165 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 KLKP1Q107X0 134 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 LYPD5Q6UWN5 251 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 ODF3Q96PU9 254 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 LHFPL6Q9Y693 200 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 MYCBP2O75592 4640 aa2.67□□□□□ -1.98
SMAD4-216ENST00000593223 SCN3AQ9NY46 2000 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 IGKV3D-11A0A0A0MRZ8 115 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 CXorf51AA0A1B0GTR3 108 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 SMIM13P0DJ93 91 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 ERHP84090 104 aaKnown RBP2.66□□□□□ -1.98
SMAD4-216ENST00000593223 ZNF791Q3KP31 576 aaPredicted RBP2.66□□□□□ -1.98
SMAD4-216ENST00000593223 TMEM170BQ5T4T1 132 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 CFAP126Q5VTH2 177 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 KRTAP26-1Q6PEX3 210 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 ZNF818PQ6ZRF7 136 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 ZNF833PQ6ZTB9 187 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 HIGD1BQ9P298 99 aa2.66□□□□□ -1.98
SMAD4-216ENST00000593223 PRO1854Q9UHT4 67 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms