RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 C18orf32Q8TCD1 76 aa10.51□□□□□ -0.73
CIRBP-243ENST00000593128 URB1-AS1Q96HZ7 61 aa10.51□□□□□ -0.73
CIRBP-243ENST00000593128 RETNLBQ9BQ08 111 aa10.51□□□□□ -0.73
CIRBP-243ENST00000593128 IGKV2D-26A0A0A0MRZ7 120 aa10.5□□□□□ -0.73
CIRBP-243ENST00000593128 C11orf86A6NJI1 115 aa10.5□□□□□ -0.73
CIRBP-243ENST00000593128 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BKO60814 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BJP06899 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BOP23527 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BBP33778 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BDP58876 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BCP62807 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST2H2BEQ16778 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BHQ93079 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BNQ99877 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 HIST1H2BMQ99879 126 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 MUC2Q02817 5179 aa10.49□□□□□ -0.73
CIRBP-243ENST00000593128 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
CIRBP-243ENST00000593128 A0A0U1RRA0 63 aa10.47□□□□□ -0.73
CIRBP-243ENST00000593128 LINC00158P58513 81 aa10.47□□□□□ -0.73
CIRBP-243ENST00000593128 COX17Q14061 63 aa10.47□□□□□ -0.73
CIRBP-243ENST00000593128 FAM229BQ4G0N7 80 aa10.47□□□□□ -0.73
CIRBP-243ENST00000593128 Q8NDZ9 215 aa10.46□□□□□ -0.73
CIRBP-243ENST00000593128 M0R378 163 aa10.45□□□□□ -0.74
CIRBP-243ENST00000593128 CHTOPQ9Y3Y2 248 aaKnown RBP10.45□□□□□ -0.74
CIRBP-243ENST00000593128 HIGD2AQ9BW72 106 aa10.44□□□□□ -0.74
CIRBP-243ENST00000593128 SFTA2Q6UW10 78 aa10.43□□□□□ -0.74
CIRBP-243ENST00000593128 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
CIRBP-243ENST00000593128 LINC00310P59036 64 aa10.41□□□□□ -0.74
CIRBP-243ENST00000593128 SERF1AO75920 110 aa10.4□□□□□ -0.74
CIRBP-243ENST00000593128 C3orf22Q8N5N4 141 aa10.4□□□□□ -0.74
CIRBP-243ENST00000593128 PLEKHB2Q96CS7 222 aa10.4□□□□□ -0.74
CIRBP-243ENST00000593128 MEIG1Q5JSS6 88 aa10.39□□□□□ -0.75
CIRBP-243ENST00000593128 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
CIRBP-243ENST00000593128 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
CIRBP-243ENST00000593128 CDIP1Q9H305 208 aa10.39□□□□□ -0.75
CIRBP-243ENST00000593128 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
CIRBP-243ENST00000593128 NCR3O14931 201 aa10.38□□□□□ -0.75
CIRBP-243ENST00000593128 SMIM13P0DJ93 91 aa10.38□□□□□ -0.75
CIRBP-243ENST00000593128 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
CIRBP-243ENST00000593128 TMA7Q9Y2S6 64 aaKnown RBP10.37□□□□□ -0.75
CIRBP-243ENST00000593128 IGLV7-46A0A075B6I9 117 aa10.36□□□□□ -0.75
CIRBP-243ENST00000593128 H0Y8G0 127 aa10.36□□□□□ -0.75
CIRBP-243ENST00000593128 BOD1L2Q8IYS8 172 aa10.36□□□□□ -0.75
CIRBP-243ENST00000593128 HSBP1O75506 76 aa10.35□□□□□ -0.75
CIRBP-243ENST00000593128 S100A6P06703 90 aa10.35□□□□□ -0.75
CIRBP-243ENST00000593128 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
CIRBP-243ENST00000593128 SPRR4Q96PI1 79 aa10.34□□□□□ -0.75
CIRBP-243ENST00000593128 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
CIRBP-243ENST00000593128 MIR7-3HGQ8N6C7 128 aa10.33□□□□□ -0.76
CIRBP-243ENST00000593128 C4orf48Q5BLP8 95 aa10.32□□□□□ -0.76
CIRBP-243ENST00000593128 PPDPFQ9H3Y8 114 aa10.32□□□□□ -0.76
CIRBP-243ENST00000593128 ZNF706Q9Y5V0 76 aaPredicted RBP10.32□□□□□ -0.76
CIRBP-243ENST00000593128 PRYO14603 147 aa10.31□□□□□ -0.76
CIRBP-243ENST00000593128 SNRPEP62304 92 aaKnown RBP10.31□□□□□ -0.76
CIRBP-243ENST00000593128 ETDCA0A1B0GVM5 59 aa10.3□□□□□ -0.76
CIRBP-243ENST00000593128 C5orf52A6NGY3 159 aa10.3□□□□□ -0.76
CIRBP-243ENST00000593128 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
CIRBP-243ENST00000593128 HERV-K104P63124 156 aa10.29□□□□□ -0.76
CIRBP-243ENST00000593128 TPRXLQ17RH7 258 aa10.29□□□□□ -0.76
CIRBP-243ENST00000593128 DAND5Q8N907 189 aa10.29□□□□□ -0.76
CIRBP-243ENST00000593128 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
CIRBP-243ENST00000593128 NDUFA12Q9UI09 145 aa10.29□□□□□ -0.76
CIRBP-243ENST00000593128 SPAG11AQ6PDA7 123 aa10.28□□□□□ -0.76
CIRBP-243ENST00000593128 MYMXA0A1B0GTQ4 84 aa10.27□□□□□ -0.77
CIRBP-243ENST00000593128 Q8NBF4 154 aa10.27□□□□□ -0.77
CIRBP-243ENST00000593128 MAP1LC3CQ9BXW4 147 aa10.27□□□□□ -0.77
CIRBP-243ENST00000593128 TRBV10-3A0A0K0K1G6 114 aa10.26□□□□□ -0.77
CIRBP-243ENST00000593128 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
CIRBP-243ENST00000593128 LEPROTL1O95214 131 aa10.26□□□□□ -0.77
CIRBP-243ENST00000593128 S100A12P80511 92 aa10.26□□□□□ -0.77
CIRBP-243ENST00000593128 LINC00337Q8N6G1 96 aa10.26□□□□□ -0.77
CIRBP-243ENST00000593128 FAT4Q6V0I7 4981 aa10.26□□□□□ -0.77
CIRBP-243ENST00000593128 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
CIRBP-243ENST00000593128 FABP4P15090 132 aa10.25□□□□□ -0.77
CIRBP-243ENST00000593128 S100A2P29034 98 aa10.25□□□□□ -0.77
CIRBP-243ENST00000593128 KCNQ1DNQ9H478 68 aa10.25□□□□□ -0.77
CIRBP-243ENST00000593128 CTAG1AP78358 180 aa10.24□□□□□ -0.77
CIRBP-243ENST00000593128 SPRR1AP35321 89 aa10.23□□□□□ -0.77
CIRBP-243ENST00000593128 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
CIRBP-243ENST00000593128 GAGE2AQ6NT46 116 aa10.23□□□□□ -0.77
CIRBP-243ENST00000593128 HIST1H2BLQ99880 126 aa10.23□□□□□ -0.77
CIRBP-243ENST00000593128 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
CIRBP-243ENST00000593128 IGLV9-49A0A0B4J1Y8 123 aa10.21□□□□□ -0.77
CIRBP-243ENST00000593128 LEPROTO15243 131 aa10.21□□□□□ -0.77
CIRBP-243ENST00000593128 DDTP30046 118 aa10.2□□□□□ -0.78
CIRBP-243ENST00000593128 PMCHL2Q9BQD1 86 aa10.2□□□□□ -0.78
CIRBP-243ENST00000593128 MIEN1Q9BRT3 115 aa10.2□□□□□ -0.78
CIRBP-243ENST00000593128 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
CIRBP-243ENST00000593128 MOBPQ13875 183 aa10.19□□□□□ -0.78
CIRBP-243ENST00000593128 FP248Q71RG6 208 aaPredicted RBP10.19□□□□□ -0.78
CIRBP-243ENST00000593128 B5MCH6 92 aa10.18□□□□□ -0.78
CIRBP-243ENST00000593128 ERC2-IT1O76042 136 aa10.18□□□□□ -0.78
CIRBP-243ENST00000593128 LGALS3P17931 250 aaKnown RBP10.18□□□□□ -0.78
CIRBP-243ENST00000593128 PLNP26678 52 aa10.18□□□□□ -0.78
CIRBP-243ENST00000593128 HERVK_113P61574 105 aa10.18□□□□□ -0.78
CIRBP-243ENST00000593128 J3QQQ9 107 aa10.17□□□□□ -0.78
CIRBP-243ENST00000593128 C3orf79P0CE67 100 aa10.17□□□□□ -0.78
CIRBP-243ENST00000593128 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms