RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 COMMD7Q86VX2 200 aa6.29□□□□□ -1.4
PRKCSH-220ENST00000593104 LINC01546A6NGU7 62 aa6.28□□□□□ -1.4
PRKCSH-220ENST00000593104 H3BRM9 83 aa6.28□□□□□ -1.4
PRKCSH-220ENST00000593104 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
PRKCSH-220ENST00000593104 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
PRKCSH-220ENST00000593104 A0A096LNJ9 63 aa6.27□□□□□ -1.41
PRKCSH-220ENST00000593104 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
PRKCSH-220ENST00000593104 PMCHL1Q16048 86 aa6.27□□□□□ -1.41
PRKCSH-220ENST00000593104 C4orf48Q5BLP8 95 aa6.27□□□□□ -1.41
PRKCSH-220ENST00000593104 SPAG11AQ6PDA7 123 aa6.27□□□□□ -1.41
PRKCSH-220ENST00000593104 FP248Q71RG6 208 aaPredicted RBP6.27□□□□□ -1.41
PRKCSH-220ENST00000593104 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
PRKCSH-220ENST00000593104 FA2HQ7L5A8 372 aa6.26□□□□□ -1.41
PRKCSH-220ENST00000593104 C11orf86A6NJI1 115 aa6.25□□□□□ -1.41
PRKCSH-220ENST00000593104 NCR3O14931 201 aa6.25□□□□□ -1.41
PRKCSH-220ENST00000593104 LINC00158P58513 81 aa6.25□□□□□ -1.41
PRKCSH-220ENST00000593104 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
PRKCSH-220ENST00000593104 SMCR5Q8TEV8 140 aa6.25□□□□□ -1.41
PRKCSH-220ENST00000593104 URB1-AS1Q96HZ7 61 aa6.25□□□□□ -1.41
PRKCSH-220ENST00000593104 GNB1LQ9BYB4 327 aa6.25□□□□□ -1.41
PRKCSH-220ENST00000593104 CTAG1AP78358 180 aa6.24□□□□□ -1.41
PRKCSH-220ENST00000593104 SMCO4Q9NRQ5 59 aa6.24□□□□□ -1.41
PRKCSH-220ENST00000593104 IGLV9-49A0A0B4J1Y8 123 aa6.23□□□□□ -1.41
PRKCSH-220ENST00000593104 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
PRKCSH-220ENST00000593104 MOBPQ13875 183 aa6.23□□□□□ -1.41
PRKCSH-220ENST00000593104 COX17Q14061 63 aa6.23□□□□□ -1.41
PRKCSH-220ENST00000593104 TMEM170BQ5T4T1 132 aa6.23□□□□□ -1.41
PRKCSH-220ENST00000593104 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
PRKCSH-220ENST00000593104 ERC2-IT1O76042 136 aa6.22□□□□□ -1.41
PRKCSH-220ENST00000593104 FABP9Q0Z7S8 132 aa6.22□□□□□ -1.41
PRKCSH-220ENST00000593104 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
PRKCSH-220ENST00000593104 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.42
PRKCSH-220ENST00000593104 Q8N377 158 aa6.21□□□□□ -1.42
PRKCSH-220ENST00000593104 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
PRKCSH-220ENST00000593104 TRBV10-3A0A0K0K1G6 114 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 KRTAP4-16G5E9R7 235 aaPredicted RBP6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 PRYO14603 147 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 SPINK1P00995 79 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 SPRR1AP35321 89 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 XP32Q5T750 250 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 BOD1L2Q8IYS8 172 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 SVBPQ8N300 66 aa6.2□□□□□ -1.42
PRKCSH-220ENST00000593104 LINC01549A6NIU2 74 aa6.19□□□□□ -1.42
PRKCSH-220ENST00000593104 TRAV9-1A0A075B6T8 112 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 ETDCA0A1B0GVM5 59 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 TMEM218A2RU14 115 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 SNAPINO95295 136 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 HBDP02042 147 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 MT1HP80294 61 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 LINC00483Q53H64 154 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 MIR7-3HGQ8N6C7 128 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 C18orf32Q8TCD1 76 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 SEC11CQ9BY50 192 aa6.18□□□□□ -1.42
PRKCSH-220ENST00000593104 APOC3P02656 99 aa6.17□□□□□ -1.42
PRKCSH-220ENST00000593104 MEIG1Q5JSS6 88 aa6.17□□□□□ -1.42
PRKCSH-220ENST00000593104 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
PRKCSH-220ENST00000593104 TMEM223A0PJW6 202 aa6.16□□□□□ -1.42
PRKCSH-220ENST00000593104 LINC00614P0C842 121 aa6.16□□□□□ -1.42
PRKCSH-220ENST00000593104 S100PP25815 95 aa6.16□□□□□ -1.42
PRKCSH-220ENST00000593104 Q9BRP9 147 aa6.16□□□□□ -1.42
PRKCSH-220ENST00000593104 CHTOPQ9Y3Y2 248 aaKnown RBP6.16□□□□□ -1.42
PRKCSH-220ENST00000593104 B5MCH6 92 aa6.15□□□□□ -1.42
PRKCSH-220ENST00000593104 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
PRKCSH-220ENST00000593104 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
PRKCSH-220ENST00000593104 C10orf91Q5T1B1 145 aa6.14□□□□□ -1.43
PRKCSH-220ENST00000593104 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
PRKCSH-220ENST00000593104 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
PRKCSH-220ENST00000593104 TRAPPC1Q9Y5R8 145 aa6.13□□□□□ -1.43
PRKCSH-220ENST00000593104 C9orf92A6NGG3 77 aa6.12□□□□□ -1.43
PRKCSH-220ENST00000593104 SLC25A20O43772 301 aa6.12□□□□□ -1.43
PRKCSH-220ENST00000593104 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
PRKCSH-220ENST00000593104 SSBP3-AS1Q7Z2R9 100 aa6.12□□□□□ -1.43
PRKCSH-220ENST00000593104 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
PRKCSH-220ENST00000593104 RPS10P5Q9NQ39 176 aa6.12□□□□□ -1.43
PRKCSH-220ENST00000593104 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
PRKCSH-220ENST00000593104 RHEBQ15382 184 aa6.11□□□□□ -1.43
PRKCSH-220ENST00000593104 COX19Q49B96 90 aa6.11□□□□□ -1.43
PRKCSH-220ENST00000593104 HRCT1Q6UXD1 115 aa6.11□□□□□ -1.43
PRKCSH-220ENST00000593104 FAM19A2Q8N3H0 131 aa6.11□□□□□ -1.43
PRKCSH-220ENST00000593104 DDTP30046 118 aa6.1□□□□□ -1.43
PRKCSH-220ENST00000593104 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
PRKCSH-220ENST00000593104 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
PRKCSH-220ENST00000593104 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
PRKCSH-220ENST00000593104 Q6ZRX8 168 aa6.09□□□□□ -1.43
PRKCSH-220ENST00000593104 IFI27L1Q96BM0 104 aa6.09□□□□□ -1.43
PRKCSH-220ENST00000593104 H0Y8G0 127 aa6.08□□□□□ -1.44
PRKCSH-220ENST00000593104 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
PRKCSH-220ENST00000593104 NPC2P61916 151 aa6.07□□□□□ -1.44
PRKCSH-220ENST00000593104 HERV-K104P63124 156 aa6.07□□□□□ -1.44
PRKCSH-220ENST00000593104 TRAV12-1A0A0B4J245 112 aa6.06□□□□□ -1.44
PRKCSH-220ENST00000593104 MYMXA0A1B0GTQ4 84 aa6.05□□□□□ -1.44
PRKCSH-220ENST00000593104 SOSTDC1Q6X4U4 206 aa6.05□□□□□ -1.44
PRKCSH-220ENST00000593104 TRAV23DV6A0A075B6W5 121 aa6.04□□□□□ -1.44
PRKCSH-220ENST00000593104 S100A12P80511 92 aa6.04□□□□□ -1.44
PRKCSH-220ENST00000593104 S100A7L2Q5SY68 101 aa6.04□□□□□ -1.44
PRKCSH-220ENST00000593104 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
PRKCSH-220ENST00000593104 IGLV6-57P01721 117 aa6.03□□□□□ -1.44
PRKCSH-220ENST00000593104 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
PRKCSH-220ENST00000593104 MAP1LC3CQ9BXW4 147 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms