RNA–Protein interactions for RNA: ENST00000592721.5

CACTIN-210, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-210ENST00000592721 Q8NDZ9 215 aa13.3□□□□□ -0.28
CACTIN-210ENST00000592721 CRYGAP11844 174 aa13.29□□□□□ -0.28
CACTIN-210ENST00000592721 LINC00310P59036 64 aa13.29□□□□□ -0.28
CACTIN-210ENST00000592721 PRR4Q16378 134 aa13.29□□□□□ -0.28
CACTIN-210ENST00000592721 TSPAN13O95857 204 aa13.28□□□□□ -0.28
CACTIN-210ENST00000592721 TMEM238C9JI98 176 aa13.26□□□□□ -0.29
CACTIN-210ENST00000592721 LEPROTL1O95214 131 aa13.26□□□□□ -0.29
CACTIN-210ENST00000592721 RPL24P83731 157 aaKnown RBP13.26□□□□□ -0.29
CACTIN-210ENST00000592721 TYMSOSQ8TAI1 123 aa13.26□□□□□ -0.29
CACTIN-210ENST00000592721 TMEM223A0PJW6 202 aa13.25□□□□□ -0.29
CACTIN-210ENST00000592721 PRLHP81277 87 aa13.25□□□□□ -0.29
CACTIN-210ENST00000592721 SFTA2Q6UW10 78 aa13.25□□□□□ -0.29
CACTIN-210ENST00000592721 TMEM126AQ9H061 195 aa13.25□□□□□ -0.29
CACTIN-210ENST00000592721 KRTAP13-2Q52LG2 175 aa13.24□□□□□ -0.29
CACTIN-210ENST00000592721 LINC00158P58513 81 aa13.23□□□□□ -0.29
CACTIN-210ENST00000592721 FAM19A1Q7Z5A9 133 aa13.23□□□□□ -0.29
CACTIN-210ENST00000592721 HSPB8Q9UJY1 196 aa13.23□□□□□ -0.29
CACTIN-210ENST00000592721 A0A0U1RRA0 63 aa13.22□□□□□ -0.29
CACTIN-210ENST00000592721 M0R378 163 aa13.22□□□□□ -0.29
CACTIN-210ENST00000592721 HIST1H2BKO60814 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BJP06899 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BOP23527 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BBP33778 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BDP58876 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BCP62807 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST2H2BEQ16778 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 FAM229BQ4G0N7 80 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BHQ93079 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BNQ99877 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 HIST1H2BMQ99879 126 aa13.19□□□□□ -0.3
CACTIN-210ENST00000592721 H0Y8G0 127 aa13.17□□□□□ -0.3
CACTIN-210ENST00000592721 SMIM13P0DJ93 91 aa13.17□□□□□ -0.3
CACTIN-210ENST00000592721 FABP4P15090 132 aa13.17□□□□□ -0.3
CACTIN-210ENST00000592721 PLNP26678 52 aa13.15□□□□□ -0.3
CACTIN-210ENST00000592721 PLEKHB2Q96CS7 222 aa13.13□□□□□ -0.31
CACTIN-210ENST00000592721 MAP1LC3CQ9BXW4 147 aa13.13□□□□□ -0.31
CACTIN-210ENST00000592721 MEIG1Q5JSS6 88 aa13.12□□□□□ -0.31
CACTIN-210ENST00000592721 IGKV2D-26A0A0A0MRZ7 120 aa13.11□□□□□ -0.31
CACTIN-210ENST00000592721 ATP6V1G1O75348 118 aa13.11□□□□□ -0.31
CACTIN-210ENST00000592721 BOD1L2Q8IYS8 172 aa13.11□□□□□ -0.31
CACTIN-210ENST00000592721 MIR7-3HGQ8N6C7 128 aa13.11□□□□□ -0.31
CACTIN-210ENST00000592721 LINC00304Q8N9R0 145 aa13.11□□□□□ -0.31
CACTIN-210ENST00000592721 DPM2O94777 84 aa13.1□□□□□ -0.31
CACTIN-210ENST00000592721 HIGD2AQ9BW72 106 aa13.1□□□□□ -0.31
CACTIN-210ENST00000592721 NDUFA12Q9UI09 145 aa13.1□□□□□ -0.31
CACTIN-210ENST00000592721 HERV-K104P63124 156 aa13.09□□□□□ -0.31
CACTIN-210ENST00000592721 IGKCP01834 107 aa13.08□□□□□ -0.32
CACTIN-210ENST00000592721 S100A1P23297 94 aa13.08□□□□□ -0.32
CACTIN-210ENST00000592721 MUC2Q02817 5179 aa13.07□□□□□ -0.32
CACTIN-210ENST00000592721 NCR3O14931 201 aa13.07□□□□□ -0.32
CACTIN-210ENST00000592721 TSPEAR-AS2P59090 65 aa13.07□□□□□ -0.32
CACTIN-210ENST00000592721 COA6Q5JTJ3 125 aaKnown RBP13.07□□□□□ -0.32
CACTIN-210ENST00000592721 RETNLBQ9BQ08 111 aa13.07□□□□□ -0.32
CACTIN-210ENST00000592721 MYMXA0A1B0GTQ4 84 aa13.06□□□□□ -0.32
CACTIN-210ENST00000592721 C3orf22Q8N5N4 141 aa13.06□□□□□ -0.32
CACTIN-210ENST00000592721 LINC00587B1AMM8 73 aa13.05□□□□□ -0.32
CACTIN-210ENST00000592721 LEPROTO15243 131 aa13.05□□□□□ -0.32
CACTIN-210ENST00000592721 HERVK_113P61574 105 aa13.05□□□□□ -0.32
CACTIN-210ENST00000592721 PMCHL2Q9BQD1 86 aa13.05□□□□□ -0.32
CACTIN-210ENST00000592721 SYS1-DBNDD2H3BUS1 97 aa13.04□□□□□ -0.32
CACTIN-210ENST00000592721 PRYO14603 147 aa13.04□□□□□ -0.32
CACTIN-210ENST00000592721 SPRR4Q96PI1 79 aa13.04□□□□□ -0.32
CACTIN-210ENST00000592721 KCNQ1DNQ9H478 68 aa13.03□□□□□ -0.32
CACTIN-210ENST00000592721 SPRR1AP35321 89 aa13.02□□□□□ -0.33
CACTIN-210ENST00000592721 DAND5Q8N907 189 aa13.01□□□□□ -0.33
CACTIN-210ENST00000592721 TRBV10-3A0A0K0K1G6 114 aa13□□□□□ -0.33
CACTIN-210ENST00000592721 J3QQQ9 107 aa13□□□□□ -0.33
CACTIN-210ENST00000592721 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
CACTIN-210ENST00000592721 KRTAP4-16G5E9R7 235 aaPredicted RBP12.99□□□□□ -0.33
CACTIN-210ENST00000592721 NMUP48645 174 aa12.99□□□□□ -0.33
CACTIN-210ENST00000592721 PET117Q6UWS5 81 aa12.99□□□□□ -0.33
CACTIN-210ENST00000592721 LINC01545Q5VT33 79 aa12.98□□□□□ -0.33
CACTIN-210ENST00000592721 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
CACTIN-210ENST00000592721 LOC107984156A0A0G2JMH3 177 aa12.96□□□□□ -0.33
CACTIN-210ENST00000592721 ETDCA0A1B0GVM5 59 aa12.96□□□□□ -0.33
CACTIN-210ENST00000592721 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.33
CACTIN-210ENST00000592721 ARL17AQ8IVW1 177 aa12.96□□□□□ -0.33
CACTIN-210ENST00000592721 ZNF706Q9Y5V0 76 aaPredicted RBP12.96□□□□□ -0.33
CACTIN-210ENST00000592721 E9PLD3 99 aa12.95□□□□□ -0.34
CACTIN-210ENST00000592721 CTAG1AP78358 180 aa12.95□□□□□ -0.34
CACTIN-210ENST00000592721 MUC17Q685J3 4493 aa12.94□□□□□ -0.34
CACTIN-210ENST00000592721 C3orf79P0CE67 100 aa12.94□□□□□ -0.34
CACTIN-210ENST00000592721 PPDPFQ9H3Y8 114 aa12.94□□□□□ -0.34
CACTIN-210ENST00000592721 IGLV7-46A0A075B6I9 117 aa12.92□□□□□ -0.34
CACTIN-210ENST00000592721 B5MCH6 92 aa12.91□□□□□ -0.34
CACTIN-210ENST00000592721 DDTP30046 118 aa12.91□□□□□ -0.34
CACTIN-210ENST00000592721 SPAG11AQ6PDA7 123 aa12.91□□□□□ -0.34
CACTIN-210ENST00000592721 TRBV10-2A0A0K0K1G8 114 aa12.9□□□□□ -0.34
CACTIN-210ENST00000592721 KRTDAPP60985 99 aa12.9□□□□□ -0.34
CACTIN-210ENST00000592721 S100A12P80511 92 aa12.89□□□□□ -0.35
CACTIN-210ENST00000592721 ERC2-IT1O76042 136 aa12.88□□□□□ -0.35
CACTIN-210ENST00000592721 TPRXLQ17RH7 258 aa12.88□□□□□ -0.35
CACTIN-210ENST00000592721 Q8NBF4 154 aa12.88□□□□□ -0.35
CACTIN-210ENST00000592721 C20orf202A1L168 122 aa12.87□□□□□ -0.35
CACTIN-210ENST00000592721 LINC00483Q53H64 154 aa12.87□□□□□ -0.35
CACTIN-210ENST00000592721 MIEN1Q9BRT3 115 aa12.87□□□□□ -0.35
CACTIN-210ENST00000592721 SPANXB1Q9NS25 103 aaPredicted RBP12.87□□□□□ -0.35
CACTIN-210ENST00000592721 EIF4EBP3O60516 100 aaPredicted RBP12.86□□□□□ -0.35
CACTIN-210ENST00000592721 C4orf48Q5BLP8 95 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms