RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
ZNF540-210ENST00000592533 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
ZNF540-210ENST00000592533 CYSRT1A8MQ03 144 aa7.83□□□□□ -1.16
ZNF540-210ENST00000592533 H3BQ85 93 aa7.83□□□□□ -1.16
ZNF540-210ENST00000592533 C6orf223Q8N319 242 aa7.83□□□□□ -1.16
ZNF540-210ENST00000592533 SMIM20Q8N5G0 67 aa7.83□□□□□ -1.16
ZNF540-210ENST00000592533 TRBV10-3A0A0K0K1G6 114 aa7.82□□□□□ -1.16
ZNF540-210ENST00000592533 ZNF561-AS1K7EIQ3 104 aa7.82□□□□□ -1.16
ZNF540-210ENST00000592533 ENHOQ6UWT2 76 aa7.82□□□□□ -1.16
ZNF540-210ENST00000592533 hADV29S1A0JD25 119 aa7.81□□□□□ -1.16
ZNF540-210ENST00000592533 SERP2Q8N6R1 65 aa7.81□□□□□ -1.16
ZNF540-210ENST00000592533 KMT2BQ9UMN6 2715 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-210ENST00000592533 Q6ZQT0 140 aa7.81□□□□□ -1.16
ZNF540-210ENST00000592533 C3orf56Q8N813 242 aa7.81□□□□□ -1.16
ZNF540-210ENST00000592533 USP17L23D6RBM5 183 aa7.8□□□□□ -1.16
ZNF540-210ENST00000592533 WFDC9Q8NEX5 89 aa7.8□□□□□ -1.16
ZNF540-210ENST00000592533 UPK3BQ9BT76 320 aa7.8□□□□□ -1.16
ZNF540-210ENST00000592533 A0A087WVE0 104 aa7.79□□□□□ -1.16
ZNF540-210ENST00000592533 KLK12Q9UKR0 248 aa7.79□□□□□ -1.16
ZNF540-210ENST00000592533 HELZ2Q9BYK8 2649 aaKnown RBP7.79□□□□□ -1.16
ZNF540-210ENST00000592533 H3BNG1 76 aa7.78□□□□□ -1.16
ZNF540-210ENST00000592533 RBM3P98179 157 aaKnown RBP7.78□□□□□ -1.16
ZNF540-210ENST00000592533 C6orf48Q9UBA6 75 aa7.78□□□□□ -1.16
ZNF540-210ENST00000592533 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
ZNF540-210ENST00000592533 UBL5Q9BZL1 73 aa7.78□□□□□ -1.16
ZNF540-210ENST00000592533 FASNP49327 2511 aaKnown RBP7.78□□□□□ -1.16
ZNF540-210ENST00000592533 NSD1Q96L73 2696 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-210ENST00000592533 PDE6GP18545 87 aa7.77□□□□□ -1.17
ZNF540-210ENST00000592533 TENM1Q9UKZ4 2725 aa7.76□□□□□ -1.17
ZNF540-210ENST00000592533 TRAV23DV6A0A075B6W5 121 aa7.76□□□□□ -1.17
ZNF540-210ENST00000592533 KRTAP26-1Q6PEX3 210 aa7.76□□□□□ -1.17
ZNF540-210ENST00000592533 NOTCH2Q04721 2471 aa7.76□□□□□ -1.17
ZNF540-210ENST00000592533 INAFM1C9JVW0 142 aa7.76□□□□□ -1.17
ZNF540-210ENST00000592533 HTN3P15516 51 aa7.76□□□□□ -1.17
ZNF540-210ENST00000592533 DIRC1Q969H9 104 aa7.75□□□□□ -1.17
ZNF540-210ENST00000592533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-210ENST00000592533 BCE1O60756 84 aa7.74□□□□□ -1.17
ZNF540-210ENST00000592533 Q6ZQY7 126 aa7.74□□□□□ -1.17
ZNF540-210ENST00000592533 HIVEP1P15822 2718 aa7.74□□□□□ -1.17
ZNF540-210ENST00000592533 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
ZNF540-210ENST00000592533 CYSTM1Q9H1C7 97 aa7.74□□□□□ -1.17
ZNF540-210ENST00000592533 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-210ENST00000592533 TMEM258P61165 79 aa7.73□□□□□ -1.17
ZNF540-210ENST00000592533 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
ZNF540-210ENST00000592533 EGFEM1PQ0D2K5 195 aa7.73□□□□□ -1.17
ZNF540-210ENST00000592533 GHRHP01286 108 aa7.73□□□□□ -1.17
ZNF540-210ENST00000592533 VPREB1P12018 145 aa7.73□□□□□ -1.17
ZNF540-210ENST00000592533 LAMTOR3Q9UHA4 124 aa7.73□□□□□ -1.17
ZNF540-210ENST00000592533 OTOGQ6ZRI0 2925 aa7.72□□□□□ -1.17
ZNF540-210ENST00000592533 FAM19A1Q7Z5A9 133 aa7.72□□□□□ -1.17
ZNF540-210ENST00000592533 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
ZNF540-210ENST00000592533 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
ZNF540-210ENST00000592533 COX7BP24311 80 aa7.72□□□□□ -1.17
ZNF540-210ENST00000592533 F8WDY8 70 aa7.71□□□□□ -1.18
ZNF540-210ENST00000592533 J3KT08 172 aa7.71□□□□□ -1.18
ZNF540-210ENST00000592533 XAGE1AQ9HD64 81 aa7.71□□□□□ -1.18
ZNF540-210ENST00000592533 CXCL6P80162 114 aa7.7□□□□□ -1.18
ZNF540-210ENST00000592533 WFDC10BQ8IUB3 73 aa7.7□□□□□ -1.18
ZNF540-210ENST00000592533 TEP1Q99973 2627 aaKnown RBP7.7□□□□□ -1.18
ZNF540-210ENST00000592533 M0R378 163 aa7.7□□□□□ -1.18
ZNF540-210ENST00000592533 LINC01547P58512 204 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-210ENST00000592533 KPRPQ5T749 579 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-210ENST00000592533 C15orf56Q8N910 161 aa7.7□□□□□ -1.18
ZNF540-210ENST00000592533 CAMK2N2Q96S95 79 aa7.7□□□□□ -1.18
ZNF540-210ENST00000592533 M0R2N4 97 aa7.69□□□□□ -1.18
ZNF540-210ENST00000592533 Q6ZVQ6 151 aa7.69□□□□□ -1.18
ZNF540-210ENST00000592533 NDUFC2-KCTD14E9PQ53 114 aa7.69□□□□□ -1.18
ZNF540-210ENST00000592533 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
ZNF540-210ENST00000592533 Q6ZRU5 148 aa7.67□□□□□ -1.18
ZNF540-210ENST00000592533 HIGD2BQ4VC39 106 aa7.67□□□□□ -1.18
ZNF540-210ENST00000592533 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
ZNF540-210ENST00000592533 ATRQ13535 2644 aa7.66□□□□□ -1.18
ZNF540-210ENST00000592533 LINC01556Q5JQF7 62 aa7.65□□□□□ -1.18
ZNF540-210ENST00000592533 DPH3Q96FX2 82 aa7.65□□□□□ -1.18
ZNF540-210ENST00000592533 Q6ZTC4 211 aa7.65□□□□□ -1.19
ZNF540-210ENST00000592533 TRAV7A0A075B6U4 112 aa7.64□□□□□ -1.19
ZNF540-210ENST00000592533 ESRGQ1W209 222 aa7.64□□□□□ -1.19
ZNF540-210ENST00000592533 LOC107984640A0A0U1RRK4 108 aa7.63□□□□□ -1.19
ZNF540-210ENST00000592533 RETNQ9HD89 108 aa7.63□□□□□ -1.19
ZNF540-210ENST00000592533 KRTAP10-11P60412 298 aa7.63□□□□□ -1.19
ZNF540-210ENST00000592533 Q6ZRP5 223 aa7.63□□□□□ -1.19
ZNF540-210ENST00000592533 C1orf43Q9BWL3 253 aa7.63□□□□□ -1.19
ZNF540-210ENST00000592533 HAMPP81172 84 aa7.62□□□□□ -1.19
ZNF540-210ENST00000592533 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
ZNF540-210ENST00000592533 HECTD1Q9ULT8 2610 aa7.61□□□□□ -1.19
ZNF540-210ENST00000592533 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
ZNF540-210ENST00000592533 SYCNQ0VAF6 134 aa7.6□□□□□ -1.19
ZNF540-210ENST00000592533 PLA2G2DQ9UNK4 145 aa7.6□□□□□ -1.19
ZNF540-210ENST00000592533 FAM19A5Q7Z5A7 132 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-210ENST00000592533 DNAH10OSP0CZ25 163 aa7.59□□□□□ -1.19
ZNF540-210ENST00000592533 KLKP1Q107X0 134 aa7.59□□□□□ -1.19
ZNF540-210ENST00000592533 OXLD1Q5BKU9 147 aa7.59□□□□□ -1.19
ZNF540-210ENST00000592533 TRAV10A0A0B4J240 114 aa7.58□□□□□ -1.2
ZNF540-210ENST00000592533 C20orf197Q8N268 126 aa7.58□□□□□ -1.2
ZNF540-210ENST00000592533 DNAH3Q8TD57 4116 aa7.58□□□□□ -1.2
ZNF540-210ENST00000592533 CMYA5Q8N3K9 4069 aa7.58□□□□□ -1.2
ZNF540-210ENST00000592533 IGLV5-37A0A075B6J1 123 aa7.57□□□□□ -1.2
ZNF540-210ENST00000592533 IGKV2D-24A0A075B6R9 120 aa7.57□□□□□ -1.2
ZNF540-210ENST00000592533 DEFB131BA0A096LNP1 70 aa7.57□□□□□ -1.2
ZNF540-210ENST00000592533 OXTP01178 125 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms