RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 COX17Q14061 63 aa10.04□□□□□ -0.8
POLR2E-208ENST00000591709 NKAPP1Q8N9T2 125 aa10.04□□□□□ -0.8
POLR2E-208ENST00000591709 LINC00167Q96N53 147 aa10.04□□□□□ -0.8
POLR2E-208ENST00000591709 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
POLR2E-208ENST00000591709 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
POLR2E-208ENST00000591709 A0A0U1RRA0 63 aa10.02□□□□□ -0.81
POLR2E-208ENST00000591709 LINC00158P58513 81 aa10.02□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BKO60814 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BJP06899 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BOP23527 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BBP33778 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BDP58876 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BCP62807 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST2H2BEQ16778 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BHQ93079 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BNQ99877 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 HIST1H2BMQ99879 126 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
POLR2E-208ENST00000591709 DPM2O94777 84 aa9.99□□□□□ -0.81
POLR2E-208ENST00000591709 PLNP26678 52 aa9.99□□□□□ -0.81
POLR2E-208ENST00000591709 MAP1LC3CQ9BXW4 147 aa9.99□□□□□ -0.81
POLR2E-208ENST00000591709 ZNF861PO60384 105 aa9.98□□□□□ -0.81
POLR2E-208ENST00000591709 BCE1O60756 84 aa9.98□□□□□ -0.81
POLR2E-208ENST00000591709 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
POLR2E-208ENST00000591709 VPREB1P12018 145 aa9.98□□□□□ -0.81
POLR2E-208ENST00000591709 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
POLR2E-208ENST00000591709 MEIG1Q5JSS6 88 aa9.98□□□□□ -0.81
POLR2E-208ENST00000591709 NDUFA12Q9UI09 145 aa9.98□□□□□ -0.81
POLR2E-208ENST00000591709 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
POLR2E-208ENST00000591709 ATP6V1G1O75348 118 aa9.97□□□□□ -0.81
POLR2E-208ENST00000591709 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
POLR2E-208ENST00000591709 LEPROTO15243 131 aa9.96□□□□□ -0.82
POLR2E-208ENST00000591709 IGKCP01834 107 aa9.96□□□□□ -0.82
POLR2E-208ENST00000591709 TSPEAR-AS2P59090 65 aa9.96□□□□□ -0.82
POLR2E-208ENST00000591709 HERV-K104P63124 156 aa9.96□□□□□ -0.82
POLR2E-208ENST00000591709 Q8NDZ9 215 aa9.96□□□□□ -0.82
POLR2E-208ENST00000591709 CRCT1Q9UGL9 99 aa9.96□□□□□ -0.82
POLR2E-208ENST00000591709 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
POLR2E-208ENST00000591709 HERVK_113P61574 105 aa9.95□□□□□ -0.82
POLR2E-208ENST00000591709 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
POLR2E-208ENST00000591709 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
POLR2E-208ENST00000591709 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
POLR2E-208ENST00000591709 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
POLR2E-208ENST00000591709 FSIP2Q5CZC0 6907 aa9.93□□□□□ -0.82
POLR2E-208ENST00000591709 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
POLR2E-208ENST00000591709 J3QQQ9 107 aa9.92□□□□□ -0.82
POLR2E-208ENST00000591709 UBE2AP49459 152 aa9.92□□□□□ -0.82
POLR2E-208ENST00000591709 LCE2DQ5TA82 110 aaPredicted RBP9.92□□□□□ -0.82
POLR2E-208ENST00000591709 A0A087X002 238 aa9.91□□□□□ -0.82
POLR2E-208ENST00000591709 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
POLR2E-208ENST00000591709 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
POLR2E-208ENST00000591709 LGALS3P17931 250 aaKnown RBP9.91□□□□□ -0.82
POLR2E-208ENST00000591709 BOD1L2Q8IYS8 172 aa9.91□□□□□ -0.82
POLR2E-208ENST00000591709 CDIP1Q9H305 208 aa9.91□□□□□ -0.82
POLR2E-208ENST00000591709 TMEM238C9JI98 176 aa9.9□□□□□ -0.82
POLR2E-208ENST00000591709 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
POLR2E-208ENST00000591709 M0R378 163 aa9.88□□□□□ -0.83
POLR2E-208ENST00000591709 NMUP48645 174 aa9.88□□□□□ -0.83
POLR2E-208ENST00000591709 FAM19A1Q7Z5A9 133 aa9.88□□□□□ -0.83
POLR2E-208ENST00000591709 DAND5Q8N907 189 aa9.88□□□□□ -0.83
POLR2E-208ENST00000591709 NCR3O14931 201 aa9.87□□□□□ -0.83
POLR2E-208ENST00000591709 PRLHP81277 87 aa9.87□□□□□ -0.83
POLR2E-208ENST00000591709 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
POLR2E-208ENST00000591709 TYMSOSQ8TAI1 123 aa9.87□□□□□ -0.83
POLR2E-208ENST00000591709 COA6Q5JTJ3 125 aaKnown RBP9.86□□□□□ -0.83
POLR2E-208ENST00000591709 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
POLR2E-208ENST00000591709 PET117Q6UWS5 81 aa9.86□□□□□ -0.83
POLR2E-208ENST00000591709 E9PLD3 99 aa9.85□□□□□ -0.83
POLR2E-208ENST00000591709 TPRXLQ17RH7 258 aa9.85□□□□□ -0.83
POLR2E-208ENST00000591709 C3orf79P0CE67 100 aa9.84□□□□□ -0.83
POLR2E-208ENST00000591709 KRTDAPP60985 99 aa9.84□□□□□ -0.83
POLR2E-208ENST00000591709 A0A0J9YXY3 114 aa9.82□□□□□ -0.84
POLR2E-208ENST00000591709 CRYGAP11844 174 aa9.82□□□□□ -0.84
POLR2E-208ENST00000591709 S100A1P23297 94 aa9.82□□□□□ -0.84
POLR2E-208ENST00000591709 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
POLR2E-208ENST00000591709 IGKV2D-26A0A0A0MRZ7 120 aa9.81□□□□□ -0.84
POLR2E-208ENST00000591709 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
POLR2E-208ENST00000591709 IGLV7-46A0A075B6I9 117 aa9.8□□□□□ -0.84
POLR2E-208ENST00000591709 NPC2P61916 151 aa9.8□□□□□ -0.84
POLR2E-208ENST00000591709 LOC107984156A0A0G2JMH3 177 aa9.79□□□□□ -0.84
POLR2E-208ENST00000591709 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
POLR2E-208ENST00000591709 PRYO14603 147 aa9.79□□□□□ -0.84
POLR2E-208ENST00000591709 LINC01547P58512 204 aaPredicted RBP9.79□□□□□ -0.84
POLR2E-208ENST00000591709 ARL17AQ8IVW1 177 aa9.79□□□□□ -0.84
POLR2E-208ENST00000591709 HIGD2AQ9BW72 106 aa9.79□□□□□ -0.84
POLR2E-208ENST00000591709 ADAMTSL4-AS1Q5T5F5 129 aa9.78□□□□□ -0.84
POLR2E-208ENST00000591709 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
POLR2E-208ENST00000591709 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.85
POLR2E-208ENST00000591709 C20orf202A1L168 122 aa9.76□□□□□ -0.85
POLR2E-208ENST00000591709 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
POLR2E-208ENST00000591709 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
POLR2E-208ENST00000591709 TTTY13Q9BZ97 58 aa9.76□□□□□ -0.85
POLR2E-208ENST00000591709 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
POLR2E-208ENST00000591709 ZNF815PA8K554 130 aa9.75□□□□□ -0.85
POLR2E-208ENST00000591709 EIF4EBP3O60516 100 aaPredicted RBP9.75□□□□□ -0.85
POLR2E-208ENST00000591709 DDTP30046 118 aa9.75□□□□□ -0.85
POLR2E-208ENST00000591709 S100A12P80511 92 aa9.75□□□□□ -0.85
POLR2E-208ENST00000591709 SPANXB1Q9NS25 103 aaPredicted RBP9.75□□□□□ -0.85
POLR2E-208ENST00000591709 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms