RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 NPC2P61916 151 aa11.55□□□□□ -0.56
CROCCP3-205ENST00000591316 C14orf144Q96I85 54 aa11.55□□□□□ -0.56
CROCCP3-205ENST00000591316 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
CROCCP3-205ENST00000591316 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
CROCCP3-205ENST00000591316 TP73-AS1Q9UF72 201 aa11.53□□□□□ -0.56
CROCCP3-205ENST00000591316 HSPG2P98160 4391 aa11.52□□□□□ -0.56
CROCCP3-205ENST00000591316 COX8AP10176 69 aa11.52□□□□□ -0.57
CROCCP3-205ENST00000591316 LITAFQ99732 161 aa11.52□□□□□ -0.57
CROCCP3-205ENST00000591316 C22orf24Q9Y442 160 aa11.52□□□□□ -0.57
CROCCP3-205ENST00000591316 BOD1L2Q8IYS8 172 aa11.51□□□□□ -0.57
CROCCP3-205ENST00000591316 M0QXV9 152 aa11.5□□□□□ -0.57
CROCCP3-205ENST00000591316 TIMM17BO60830 172 aa11.5□□□□□ -0.57
CROCCP3-205ENST00000591316 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
CROCCP3-205ENST00000591316 RYR1P21817 5038 aa11.5□□□□□ -0.57
CROCCP3-205ENST00000591316 EPM2AB3EWF7 344 aa11.5□□□□□ -0.57
CROCCP3-205ENST00000591316 Q8NDZ9 215 aa11.5□□□□□ -0.57
CROCCP3-205ENST00000591316 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
CROCCP3-205ENST00000591316 S100A12P80511 92 aa11.49□□□□□ -0.57
CROCCP3-205ENST00000591316 RPL24P83731 157 aaKnown RBP11.49□□□□□ -0.57
CROCCP3-205ENST00000591316 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
CROCCP3-205ENST00000591316 PLA2G2DQ9UNK4 145 aa11.49□□□□□ -0.57
CROCCP3-205ENST00000591316 TMEM238C9JI98 176 aa11.48□□□□□ -0.57
CROCCP3-205ENST00000591316 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
CROCCP3-205ENST00000591316 NKAPP1Q8N9T2 125 aa11.48□□□□□ -0.57
CROCCP3-205ENST00000591316 HERC2O95714 4834 aa11.48□□□□□ -0.57
CROCCP3-205ENST00000591316 GAGE10A6NGK3 116 aa11.47□□□□□ -0.57
CROCCP3-205ENST00000591316 VPREB1P12018 145 aa11.47□□□□□ -0.57
CROCCP3-205ENST00000591316 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
CROCCP3-205ENST00000591316 C7orf33Q8WU49 177 aa11.47□□□□□ -0.57
CROCCP3-205ENST00000591316 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
CROCCP3-205ENST00000591316 LINC00308Q8TCZ7 52 aa11.46□□□□□ -0.57
CROCCP3-205ENST00000591316 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
CROCCP3-205ENST00000591316 SLC25A34Q6PIV7 304 aa11.45□□□□□ -0.58
CROCCP3-205ENST00000591316 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
CROCCP3-205ENST00000591316 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
CROCCP3-205ENST00000591316 UBE2BP63146 152 aa11.45□□□□□ -0.58
CROCCP3-205ENST00000591316 FAT1Q14517 4588 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 LOC107984156A0A0G2JMH3 177 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 RPL37AP8A6NKH3 93 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 DLEU1O43261 78 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 LBHQ53QV2 105 aaPredicted RBP11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 ARL17AQ8IVW1 177 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 LINC00167Q96N53 147 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 SPANXDQ9BXN6 97 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 SPANXCQ9NY87 97 aa11.44□□□□□ -0.58
CROCCP3-205ENST00000591316 IGLV5-37A0A075B6J1 123 aa11.43□□□□□ -0.58
CROCCP3-205ENST00000591316 NCR3O14931 201 aa11.43□□□□□ -0.58
CROCCP3-205ENST00000591316 LINC00518Q8N0U6 118 aa11.43□□□□□ -0.58
CROCCP3-205ENST00000591316 Q8N1X5 172 aa11.43□□□□□ -0.58
CROCCP3-205ENST00000591316 KRTAP11-1Q8IUC1 163 aa11.42□□□□□ -0.58
CROCCP3-205ENST00000591316 MUSTN1Q8IVN3 82 aa11.42□□□□□ -0.58
CROCCP3-205ENST00000591316 Q5VSD8 79 aa11.41□□□□□ -0.58
CROCCP3-205ENST00000591316 SMIM6P0DI80 62 aa11.41□□□□□ -0.58
CROCCP3-205ENST00000591316 RPL37AP61513 92 aaKnown RBP11.41□□□□□ -0.58
CROCCP3-205ENST00000591316 Q6ZVH6 145 aa11.41□□□□□ -0.58
CROCCP3-205ENST00000591316 IGKV2-28A0A075B6P5 120 aa11.39□□□□□ -0.59
CROCCP3-205ENST00000591316 M0R378 163 aa11.39□□□□□ -0.59
CROCCP3-205ENST00000591316 IGKV2D-28P01615 120 aa11.39□□□□□ -0.59
CROCCP3-205ENST00000591316 HIST1H4GQ99525 98 aa11.39□□□□□ -0.59
CROCCP3-205ENST00000591316 SPANXB1Q9NS25 103 aaPredicted RBP11.39□□□□□ -0.59
CROCCP3-205ENST00000591316 IFITM1P13164 125 aa11.38□□□□□ -0.59
CROCCP3-205ENST00000591316 PSORS1C2Q9UIG4 136 aa11.38□□□□□ -0.59
CROCCP3-205ENST00000591316 NDUFC2O95298 119 aa11.37□□□□□ -0.59
CROCCP3-205ENST00000591316 COPS9Q8WXC6 57 aa11.37□□□□□ -0.59
CROCCP3-205ENST00000591316 PRO1933Q9H354 126 aa11.37□□□□□ -0.59
CROCCP3-205ENST00000591316 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
CROCCP3-205ENST00000591316 C2orf91Q6ZV80 131 aa11.37□□□□□ -0.59
CROCCP3-205ENST00000591316 C12orf57Q99622 126 aa11.37□□□□□ -0.59
CROCCP3-205ENST00000591316 C1orf137Q5JT78 98 aa11.36□□□□□ -0.59
CROCCP3-205ENST00000591316 IGLV1-50A0A075B6I6 118 aa11.35□□□□□ -0.59
CROCCP3-205ENST00000591316 HIGD1BQ9P298 99 aa11.35□□□□□ -0.59
CROCCP3-205ENST00000591316 UQCR10Q9UDW1 63 aa11.35□□□□□ -0.59
CROCCP3-205ENST00000591316 KRTAP4-5Q9BYR2 181 aa11.34□□□□□ -0.59
CROCCP3-205ENST00000591316 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
CROCCP3-205ENST00000591316 S100A7L2Q5SY68 101 aa11.33□□□□□ -0.6
CROCCP3-205ENST00000591316 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
CROCCP3-205ENST00000591316 TRBV10-3A0A0K0K1G6 114 aa11.33□□□□□ -0.6
CROCCP3-205ENST00000591316 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
CROCCP3-205ENST00000591316 DDTP30046 118 aa11.32□□□□□ -0.6
CROCCP3-205ENST00000591316 A4D1N5 150 aa11.3□□□□□ -0.6
CROCCP3-205ENST00000591316 KRTAP10-4P60372 401 aaPredicted RBP11.3□□□□□ -0.6
CROCCP3-205ENST00000591316 PPDPFQ9H3Y8 114 aa11.29□□□□□ -0.6
CROCCP3-205ENST00000591316 REG3GQ6UW15 175 aa11.28□□□□□ -0.6
CROCCP3-205ENST00000591316 LINC00337Q8N6G1 96 aa11.28□□□□□ -0.6
CROCCP3-205ENST00000591316 A6NDN8 102 aa11.28□□□□□ -0.6
CROCCP3-205ENST00000591316 IGLV6-57P01721 117 aa11.27□□□□□ -0.61
CROCCP3-205ENST00000591316 HNRNPA3P51991 378 aaKnown RBP11.27□□□□□ -0.61
CROCCP3-205ENST00000591316 TMEM126AQ9H061 195 aa11.27□□□□□ -0.61
CROCCP3-205ENST00000591316 IGLV7-43P04211 117 aa11.26□□□□□ -0.61
CROCCP3-205ENST00000591316 CEND1Q8N111 149 aa11.26□□□□□ -0.61
CROCCP3-205ENST00000591316 BCE1O60756 84 aa11.25□□□□□ -0.61
CROCCP3-205ENST00000591316 TAL2Q16559 108 aa11.25□□□□□ -0.61
CROCCP3-205ENST00000591316 KCNQ1DNQ9H478 68 aa11.25□□□□□ -0.61
CROCCP3-205ENST00000591316 PRYO14603 147 aa11.24□□□□□ -0.61
CROCCP3-205ENST00000591316 FAM19A1Q7Z5A9 133 aa11.24□□□□□ -0.61
CROCCP3-205ENST00000591316 TRAV23DV6A0A075B6W5 121 aa11.22□□□□□ -0.61
CROCCP3-205ENST00000591316 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
CROCCP3-205ENST00000591316 TSTD3H0UI37 97 aa11.22□□□□□ -0.61
CROCCP3-205ENST00000591316 UBE2AP49459 152 aa11.22□□□□□ -0.61
CROCCP3-205ENST00000591316 HSD52Q0P140 79 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms