RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 PMCHL2Q9BQD1 86 aa12.73□□□□□ -0.37
LRP3-202ENST00000590275 IGLV1-50A0A075B6I6 118 aa12.71□□□□□ -0.37
LRP3-202ENST00000590275 SMIM13P0DJ93 91 aa12.71□□□□□ -0.37
LRP3-202ENST00000590275 LINC00158P58513 81 aa12.71□□□□□ -0.37
LRP3-202ENST00000590275 TMEM238C9JI98 176 aa12.7□□□□□ -0.38
LRP3-202ENST00000590275 SFTA2Q6UW10 78 aa12.69□□□□□ -0.38
LRP3-202ENST00000590275 LPAP08519 4548 aa12.69□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BKO60814 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BJP06899 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BOP23527 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BBP33778 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BDP58876 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BCP62807 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST2H2BEQ16778 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BHQ93079 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BNQ99877 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 HIST1H2BMQ99879 126 aa12.68□□□□□ -0.38
LRP3-202ENST00000590275 A0A087X002 238 aa12.67□□□□□ -0.38
LRP3-202ENST00000590275 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
LRP3-202ENST00000590275 ANAPC11Q9NYG5 84 aa12.67□□□□□ -0.38
LRP3-202ENST00000590275 NDUFA12Q9UI09 145 aa12.67□□□□□ -0.38
LRP3-202ENST00000590275 M0R378 163 aa12.66□□□□□ -0.38
LRP3-202ENST00000590275 HSPB8Q9UJY1 196 aa12.66□□□□□ -0.38
LRP3-202ENST00000590275 RPL24P83731 157 aaKnown RBP12.65□□□□□ -0.38
LRP3-202ENST00000590275 MIR7-3HGQ8N6C7 128 aa12.65□□□□□ -0.38
LRP3-202ENST00000590275 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
LRP3-202ENST00000590275 PRLHP81277 87 aa12.64□□□□□ -0.39
LRP3-202ENST00000590275 LEPROTO15243 131 aa12.63□□□□□ -0.39
LRP3-202ENST00000590275 DPM2O94777 84 aa12.63□□□□□ -0.39
LRP3-202ENST00000590275 PLNP26678 52 aa12.62□□□□□ -0.39
LRP3-202ENST00000590275 UBE2AP49459 152 aa12.62□□□□□ -0.39
LRP3-202ENST00000590275 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
LRP3-202ENST00000590275 IGKCP01834 107 aa12.61□□□□□ -0.39
LRP3-202ENST00000590275 HERV-K104P63124 156 aa12.61□□□□□ -0.39
LRP3-202ENST00000590275 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
LRP3-202ENST00000590275 DAND5Q8N907 189 aa12.6□□□□□ -0.39
LRP3-202ENST00000590275 J3QQQ9 107 aa12.59□□□□□ -0.39
LRP3-202ENST00000590275 KRTAP13-2Q52LG2 175 aa12.59□□□□□ -0.39
LRP3-202ENST00000590275 FAM19A1Q7Z5A9 133 aa12.59□□□□□ -0.39
LRP3-202ENST00000590275 BOD1L2Q8IYS8 172 aa12.59□□□□□ -0.39
LRP3-202ENST00000590275 RNF213Q63HN8 5207 aa12.58□□□□□ -0.4
LRP3-202ENST00000590275 NCR3O14931 201 aa12.58□□□□□ -0.4
LRP3-202ENST00000590275 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
LRP3-202ENST00000590275 RPL13AP40429 203 aaKnown RBP12.57□□□□□ -0.4
LRP3-202ENST00000590275 MAP1LC3CQ9BXW4 147 aa12.57□□□□□ -0.4
LRP3-202ENST00000590275 SYS1-DBNDD2H3BUS1 97 aa12.56□□□□□ -0.4
LRP3-202ENST00000590275 EIF4EBP3O60516 100 aaPredicted RBP12.55□□□□□ -0.4
LRP3-202ENST00000590275 ATP6V1G1O75348 118 aa12.53□□□□□ -0.4
LRP3-202ENST00000590275 LOC107984156A0A0G2JMH3 177 aa12.52□□□□□ -0.41
LRP3-202ENST00000590275 CRYGAP11844 174 aa12.52□□□□□ -0.41
LRP3-202ENST00000590275 ARL17AQ8IVW1 177 aa12.52□□□□□ -0.41
LRP3-202ENST00000590275 E9PLD3 99 aa12.51□□□□□ -0.41
LRP3-202ENST00000590275 KRTAP4-16G5E9R7 235 aaPredicted RBP12.51□□□□□ -0.41
LRP3-202ENST00000590275 HERVK_113P61574 105 aa12.51□□□□□ -0.41
LRP3-202ENST00000590275 ADAMTSL4-AS1Q5T5F5 129 aa12.51□□□□□ -0.41
LRP3-202ENST00000590275 LINC01545Q5VT33 79 aa12.51□□□□□ -0.41
LRP3-202ENST00000590275 SOSTDC1Q6X4U4 206 aa12.51□□□□□ -0.41
LRP3-202ENST00000590275 TRBV10-3A0A0K0K1G6 114 aa12.5□□□□□ -0.41
LRP3-202ENST00000590275 LINC00587B1AMM8 73 aa12.5□□□□□ -0.41
LRP3-202ENST00000590275 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
LRP3-202ENST00000590275 SPRR1AP35321 89 aa12.5□□□□□ -0.41
LRP3-202ENST00000590275 COA6Q5JTJ3 125 aaKnown RBP12.5□□□□□ -0.41
LRP3-202ENST00000590275 A0A0J9YXY3 114 aa12.49□□□□□ -0.41
LRP3-202ENST00000590275 NMUP48645 174 aa12.49□□□□□ -0.41
LRP3-202ENST00000590275 TYMSOSQ8TAI1 123 aa12.49□□□□□ -0.41
LRP3-202ENST00000590275 KCNQ1DNQ9H478 68 aa12.49□□□□□ -0.41
LRP3-202ENST00000590275 TSPAN13O95857 204 aa12.48□□□□□ -0.41
LRP3-202ENST00000590275 C3orf79P0CE67 100 aa12.48□□□□□ -0.41
LRP3-202ENST00000590275 IGKV2D-26A0A0A0MRZ7 120 aa12.47□□□□□ -0.41
LRP3-202ENST00000590275 PRYO14603 147 aa12.47□□□□□ -0.41
LRP3-202ENST00000590275 FAM229BQ4G0N7 80 aa12.47□□□□□ -0.41
LRP3-202ENST00000590275 HIGD2AQ9BW72 106 aa12.47□□□□□ -0.41
LRP3-202ENST00000590275 PET117Q6UWS5 81 aa12.45□□□□□ -0.42
LRP3-202ENST00000590275 LITAFQ99732 161 aa12.45□□□□□ -0.42
LRP3-202ENST00000590275 TTTY13Q9BZ97 58 aa12.45□□□□□ -0.42
LRP3-202ENST00000590275 NPC2P61916 151 aa12.44□□□□□ -0.42
LRP3-202ENST00000590275 C3orf22Q8N5N4 141 aa12.44□□□□□ -0.42
LRP3-202ENST00000590275 LINC00337Q8N6G1 96 aa12.44□□□□□ -0.42
LRP3-202ENST00000590275 SMCR5Q8TEV8 140 aa12.42□□□□□ -0.42
LRP3-202ENST00000590275 SPRR4Q96PI1 79 aa12.42□□□□□ -0.42
LRP3-202ENST00000590275 TRBV10-2A0A0K0K1G8 114 aa12.4□□□□□ -0.42
LRP3-202ENST00000590275 B5MCH6 92 aa12.39□□□□□ -0.43
LRP3-202ENST00000590275 ERC2-IT1O76042 136 aa12.39□□□□□ -0.43
LRP3-202ENST00000590275 DDTP30046 118 aa12.39□□□□□ -0.43
LRP3-202ENST00000590275 KRTDAPP60985 99 aa12.39□□□□□ -0.43
LRP3-202ENST00000590275 PRR4Q16378 134 aa12.39□□□□□ -0.43
LRP3-202ENST00000590275 NDUFC2O95298 119 aa12.38□□□□□ -0.43
LRP3-202ENST00000590275 IGLV6-57P01721 117 aa12.38□□□□□ -0.43
LRP3-202ENST00000590275 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
LRP3-202ENST00000590275 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
LRP3-202ENST00000590275 Q9BRP9 147 aa12.36□□□□□ -0.43
LRP3-202ENST00000590275 ANKRD39Q53RE8 183 aa12.35□□□□□ -0.43
LRP3-202ENST00000590275 LINC00304Q8N9R0 145 aa12.35□□□□□ -0.43
LRP3-202ENST00000590275 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
LRP3-202ENST00000590275 ZNF815PA8K554 130 aa12.34□□□□□ -0.43
LRP3-202ENST00000590275 LINC00308Q8TCZ7 52 aa12.34□□□□□ -0.43
LRP3-202ENST00000590275 PPDPFQ9H3Y8 114 aa12.34□□□□□ -0.43
LRP3-202ENST00000590275 ATOH7Q8N100 152 aa12.33□□□□□ -0.44
LRP3-202ENST00000590275 RETNLBQ9BQ08 111 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms