RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 UBE2AP49459 152 aa12.21□□□□□ -0.45
CIRBP-226ENST00000590171 LINC00158P58513 81 aa12.21□□□□□ -0.45
CIRBP-226ENST00000590171 A0A087X002 238 aa12.2□□□□□ -0.46
CIRBP-226ENST00000590171 A0A0U1RRA0 63 aa12.2□□□□□ -0.46
CIRBP-226ENST00000590171 H0Y8G0 127 aa12.19□□□□□ -0.46
CIRBP-226ENST00000590171 TMEM238C9JI98 176 aa12.18□□□□□ -0.46
CIRBP-226ENST00000590171 LEPROTL1O95214 131 aa12.18□□□□□ -0.46
CIRBP-226ENST00000590171 TMEM126AQ9H061 195 aa12.18□□□□□ -0.46
CIRBP-226ENST00000590171 PRLHP81277 87 aa12.17□□□□□ -0.46
CIRBP-226ENST00000590171 RNF213Q63HN8 5207 aa12.16□□□□□ -0.46
CIRBP-226ENST00000590171 LPAP08519 4548 aa12.16□□□□□ -0.46
CIRBP-226ENST00000590171 M0R378 163 aa12.16□□□□□ -0.46
CIRBP-226ENST00000590171 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
CIRBP-226ENST00000590171 ANAPC11Q9NYG5 84 aa12.16□□□□□ -0.46
CIRBP-226ENST00000590171 CRYGAP11844 174 aa12.15□□□□□ -0.46
CIRBP-226ENST00000590171 FAM19A1Q7Z5A9 133 aa12.15□□□□□ -0.46
CIRBP-226ENST00000590171 MEIG1Q5JSS6 88 aa12.14□□□□□ -0.47
CIRBP-226ENST00000590171 HERV-K104P63124 156 aa12.13□□□□□ -0.47
CIRBP-226ENST00000590171 NDUFA12Q9UI09 145 aa12.13□□□□□ -0.47
CIRBP-226ENST00000590171 HSPB8Q9UJY1 196 aa12.13□□□□□ -0.47
CIRBP-226ENST00000590171 FABP4P15090 132 aa12.12□□□□□ -0.47
CIRBP-226ENST00000590171 MIR7-3HGQ8N6C7 128 aa12.12□□□□□ -0.47
CIRBP-226ENST00000590171 TYMSOSQ8TAI1 123 aa12.12□□□□□ -0.47
CIRBP-226ENST00000590171 ATP6V1G1O75348 118 aa12.11□□□□□ -0.47
CIRBP-226ENST00000590171 TSPEAR-AS2P59090 65 aa12.11□□□□□ -0.47
CIRBP-226ENST00000590171 KRTAP13-2Q52LG2 175 aa12.1□□□□□ -0.47
CIRBP-226ENST00000590171 MYMXA0A1B0GTQ4 84 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 TSPAN13O95857 204 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 PLNP26678 52 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
CIRBP-226ENST00000590171 BOD1L2Q8IYS8 172 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
CIRBP-226ENST00000590171 FAM229BQ4G0N7 80 aa12.08□□□□□ -0.48
CIRBP-226ENST00000590171 PMCHL2Q9BQD1 86 aa12.08□□□□□ -0.48
CIRBP-226ENST00000590171 LINC00587B1AMM8 73 aa12.07□□□□□ -0.48
CIRBP-226ENST00000590171 LEPROTO15243 131 aa12.07□□□□□ -0.48
CIRBP-226ENST00000590171 PRR4Q16378 134 aa12.07□□□□□ -0.48
CIRBP-226ENST00000590171 NCR3O14931 201 aa12.06□□□□□ -0.48
CIRBP-226ENST00000590171 DPM2O94777 84 aa12.06□□□□□ -0.48
CIRBP-226ENST00000590171 PLEKHB2Q96CS7 222 aa12.06□□□□□ -0.48
CIRBP-226ENST00000590171 MAP1LC3CQ9BXW4 147 aa12.05□□□□□ -0.48
CIRBP-226ENST00000590171 IGKCP01834 107 aa12.04□□□□□ -0.48
CIRBP-226ENST00000590171 HIGD2AQ9BW72 106 aa12.04□□□□□ -0.48
CIRBP-226ENST00000590171 J3QQQ9 107 aa12.03□□□□□ -0.48
CIRBP-226ENST00000590171 IGKV2D-26A0A0A0MRZ7 120 aa12.02□□□□□ -0.49
CIRBP-226ENST00000590171 PRYO14603 147 aa12.02□□□□□ -0.49
CIRBP-226ENST00000590171 HERVK_113P61574 105 aa12.02□□□□□ -0.49
CIRBP-226ENST00000590171 DAND5Q8N907 189 aa12.02□□□□□ -0.49
CIRBP-226ENST00000590171 SPRR1AP35321 89 aa12□□□□□ -0.49
CIRBP-226ENST00000590171 KCNQ1DNQ9H478 68 aa12□□□□□ -0.49
CIRBP-226ENST00000590171 LOC107984156A0A0G2JMH3 177 aa11.99□□□□□ -0.49
CIRBP-226ENST00000590171 TRBV10-3A0A0K0K1G6 114 aa11.99□□□□□ -0.49
CIRBP-226ENST00000590171 LGALS3P17931 250 aaKnown RBP11.99□□□□□ -0.49
CIRBP-226ENST00000590171 NMUP48645 174 aa11.99□□□□□ -0.49
CIRBP-226ENST00000590171 ARL17AQ8IVW1 177 aa11.99□□□□□ -0.49
CIRBP-226ENST00000590171 LINC00337Q8N6G1 96 aa11.98□□□□□ -0.49
CIRBP-226ENST00000590171 LINC00304Q8N9R0 145 aa11.98□□□□□ -0.49
CIRBP-226ENST00000590171 KRTAP4-16G5E9R7 235 aaPredicted RBP11.97□□□□□ -0.49
CIRBP-226ENST00000590171 SPRR4Q96PI1 79 aa11.97□□□□□ -0.49
CIRBP-226ENST00000590171 SYS1-DBNDD2H3BUS1 97 aa11.96□□□□□ -0.49
CIRBP-226ENST00000590171 C3orf22Q8N5N4 141 aa11.96□□□□□ -0.49
CIRBP-226ENST00000590171 TRBV10-2A0A0K0K1G8 114 aa11.93□□□□□ -0.5
CIRBP-226ENST00000590171 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
CIRBP-226ENST00000590171 E9PLD3 99 aa11.93□□□□□ -0.5
CIRBP-226ENST00000590171 S100A1P23297 94 aa11.93□□□□□ -0.5
CIRBP-226ENST00000590171 DDTP30046 118 aa11.92□□□□□ -0.5
CIRBP-226ENST00000590171 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
CIRBP-226ENST00000590171 SMCR5Q8TEV8 140 aa11.92□□□□□ -0.5
CIRBP-226ENST00000590171 MIEN1Q9BRT3 115 aa11.92□□□□□ -0.5
CIRBP-226ENST00000590171 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
CIRBP-226ENST00000590171 A0A0J9YXY3 114 aa11.91□□□□□ -0.5
CIRBP-226ENST00000590171 RETNLBQ9BQ08 111 aa11.91□□□□□ -0.5
CIRBP-226ENST00000590171 SPANXB1Q9NS25 103 aaPredicted RBP11.91□□□□□ -0.5
CIRBP-226ENST00000590171 S100A12P80511 92 aa11.9□□□□□ -0.5
CIRBP-226ENST00000590171 ADAMTSL4-AS1Q5T5F5 129 aa11.9□□□□□ -0.5
CIRBP-226ENST00000590171 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
CIRBP-226ENST00000590171 PET117Q6UWS5 81 aa11.9□□□□□ -0.5
CIRBP-226ENST00000590171 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
CIRBP-226ENST00000590171 EIF4EBP3O60516 100 aaPredicted RBP11.89□□□□□ -0.51
CIRBP-226ENST00000590171 NDUFC2O95298 119 aa11.89□□□□□ -0.51
CIRBP-226ENST00000590171 B5MCH6 92 aa11.88□□□□□ -0.51
CIRBP-226ENST00000590171 NPC2P61916 151 aa11.88□□□□□ -0.51
CIRBP-226ENST00000590171 C3orf79P0CE67 100 aa11.87□□□□□ -0.51
CIRBP-226ENST00000590171 KRTDAPP60985 99 aa11.87□□□□□ -0.51
CIRBP-226ENST00000590171 IGLV6-57P01721 117 aa11.86□□□□□ -0.51
CIRBP-226ENST00000590171 CTAG1AP78358 180 aa11.86□□□□□ -0.51
CIRBP-226ENST00000590171 PPDPFQ9H3Y8 114 aa11.86□□□□□ -0.51
CIRBP-226ENST00000590171 S100A7L2Q5SY68 101 aa11.85□□□□□ -0.51
CIRBP-226ENST00000590171 ERC2-IT1O76042 136 aa11.84□□□□□ -0.51
CIRBP-226ENST00000590171 LINC00483Q53H64 154 aa11.83□□□□□ -0.52
CIRBP-226ENST00000590171 LITAFQ99732 161 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms