RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 Q8NBF4 154 aa7.84□□□□□ -1.15
SF3A2-205ENST00000590034 NDUFA6P56556 154 aa7.83□□□□□ -1.16
SF3A2-205ENST00000590034 URB1-AS1Q96HZ7 61 aa7.83□□□□□ -1.16
SF3A2-205ENST00000590034 SMCO4Q9NRQ5 59 aa7.83□□□□□ -1.16
SF3A2-205ENST00000590034 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
SF3A2-205ENST00000590034 C11orf86A6NJI1 115 aa7.82□□□□□ -1.16
SF3A2-205ENST00000590034 LINC00337Q8N6G1 96 aa7.82□□□□□ -1.16
SF3A2-205ENST00000590034 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
SF3A2-205ENST00000590034 PMCHL1Q16048 86 aa7.8□□□□□ -1.16
SF3A2-205ENST00000590034 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
SF3A2-205ENST00000590034 A0A0U1RRA0 63 aa7.79□□□□□ -1.16
SF3A2-205ENST00000590034 SPRR1AP35321 89 aa7.79□□□□□ -1.16
SF3A2-205ENST00000590034 LINC01547P58512 204 aaPredicted RBP7.79□□□□□ -1.16
SF3A2-205ENST00000590034 LINC00158P58513 81 aa7.79□□□□□ -1.16
SF3A2-205ENST00000590034 FABP9Q0Z7S8 132 aa7.79□□□□□ -1.16
SF3A2-205ENST00000590034 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
SF3A2-205ENST00000590034 ZNF706Q9Y5V0 76 aaPredicted RBP7.79□□□□□ -1.16
SF3A2-205ENST00000590034 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
SF3A2-205ENST00000590034 KRTAP4-16G5E9R7 235 aaPredicted RBP7.78□□□□□ -1.16
SF3A2-205ENST00000590034 S100PP25815 95 aa7.78□□□□□ -1.16
SF3A2-205ENST00000590034 CLLU1Q5K131 121 aa7.78□□□□□ -1.16
SF3A2-205ENST00000590034 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
SF3A2-205ENST00000590034 PRYO14603 147 aa7.77□□□□□ -1.17
SF3A2-205ENST00000590034 SPINK1P00995 79 aa7.77□□□□□ -1.17
SF3A2-205ENST00000590034 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
SF3A2-205ENST00000590034 C18orf32Q8TCD1 76 aa7.77□□□□□ -1.17
SF3A2-205ENST00000590034 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.17
SF3A2-205ENST00000590034 NCR3O14931 201 aa7.76□□□□□ -1.17
SF3A2-205ENST00000590034 HBDP02042 147 aa7.76□□□□□ -1.17
SF3A2-205ENST00000590034 COX19Q49B96 90 aa7.76□□□□□ -1.17
SF3A2-205ENST00000590034 LINC00483Q53H64 154 aa7.76□□□□□ -1.17
SF3A2-205ENST00000590034 KCNQ1DNQ9H478 68 aa7.76□□□□□ -1.17
SF3A2-205ENST00000590034 LINC00614P0C842 121 aa7.75□□□□□ -1.17
SF3A2-205ENST00000590034 SMIM13P0DJ93 91 aa7.75□□□□□ -1.17
SF3A2-205ENST00000590034 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
SF3A2-205ENST00000590034 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
SF3A2-205ENST00000590034 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
SF3A2-205ENST00000590034 Q8N377 158 aa7.74□□□□□ -1.17
SF3A2-205ENST00000590034 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
SF3A2-205ENST00000590034 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
SF3A2-205ENST00000590034 ERC2-IT1O76042 136 aa7.73□□□□□ -1.17
SF3A2-205ENST00000590034 MOBPQ13875 183 aa7.73□□□□□ -1.17
SF3A2-205ENST00000590034 LCE2CQ5TA81 110 aa7.73□□□□□ -1.17
SF3A2-205ENST00000590034 SEC11CQ9BY50 192 aa7.73□□□□□ -1.17
SF3A2-205ENST00000590034 TRBV10-3A0A0K0K1G6 114 aa7.72□□□□□ -1.17
SF3A2-205ENST00000590034 ETDCA0A1B0GVM5 59 aa7.72□□□□□ -1.17
SF3A2-205ENST00000590034 GAGE2AQ6NT46 116 aa7.72□□□□□ -1.17
SF3A2-205ENST00000590034 MIR7-3HGQ8N6C7 128 aa7.72□□□□□ -1.17
SF3A2-205ENST00000590034 CHTOPQ9Y3Y2 248 aaKnown RBP7.72□□□□□ -1.17
SF3A2-205ENST00000590034 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
SF3A2-205ENST00000590034 XP32Q5T750 250 aa7.71□□□□□ -1.18
SF3A2-205ENST00000590034 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
SF3A2-205ENST00000590034 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
SF3A2-205ENST00000590034 B5MCH6 92 aa7.69□□□□□ -1.18
SF3A2-205ENST00000590034 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
SF3A2-205ENST00000590034 NDUFA12Q9UI09 145 aa7.69□□□□□ -1.18
SF3A2-205ENST00000590034 TRAPPC1Q9Y5R8 145 aa7.69□□□□□ -1.18
SF3A2-205ENST00000590034 ATP6V1G1O75348 118 aa7.68□□□□□ -1.18
SF3A2-205ENST00000590034 FAM19A2Q8N3H0 131 aa7.68□□□□□ -1.18
SF3A2-205ENST00000590034 Q9BRP9 147 aa7.68□□□□□ -1.18
SF3A2-205ENST00000590034 RPS10P5Q9NQ39 176 aa7.68□□□□□ -1.18
SF3A2-205ENST00000590034 IFITM2Q01629 132 aa7.67□□□□□ -1.18
SF3A2-205ENST00000590034 C10orf91Q5T1B1 145 aa7.67□□□□□ -1.18
SF3A2-205ENST00000590034 SSBP3-AS1Q7Z2R9 100 aa7.67□□□□□ -1.18
SF3A2-205ENST00000590034 TRAV12-1A0A0B4J245 112 aa7.66□□□□□ -1.18
SF3A2-205ENST00000590034 SLC25A20O43772 301 aa7.66□□□□□ -1.18
SF3A2-205ENST00000590034 RHEBQ15382 184 aa7.66□□□□□ -1.18
SF3A2-205ENST00000590034 HERV-K104P63124 156 aa7.65□□□□□ -1.18
SF3A2-205ENST00000590034 IFI27L1Q96BM0 104 aa7.65□□□□□ -1.18
SF3A2-205ENST00000590034 TSPEAR-AS2P59090 65 aa7.64□□□□□ -1.19
SF3A2-205ENST00000590034 Q6ZRX8 168 aa7.64□□□□□ -1.19
SF3A2-205ENST00000590034 DDTP30046 118 aa7.63□□□□□ -1.19
SF3A2-205ENST00000590034 MT1HP80294 61 aa7.63□□□□□ -1.19
SF3A2-205ENST00000590034 COMMD7Q86VX2 200 aa7.63□□□□□ -1.19
SF3A2-205ENST00000590034 LOC107984156A0A0G2JMH3 177 aa7.62□□□□□ -1.19
SF3A2-205ENST00000590034 ARL17AQ8IVW1 177 aa7.62□□□□□ -1.19
SF3A2-205ENST00000590034 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
SF3A2-205ENST00000590034 MYMXA0A1B0GTQ4 84 aa7.61□□□□□ -1.19
SF3A2-205ENST00000590034 S100A12P80511 92 aa7.61□□□□□ -1.19
SF3A2-205ENST00000590034 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
SF3A2-205ENST00000590034 C9orf153Q5TBE3 101 aa7.6□□□□□ -1.19
SF3A2-205ENST00000590034 CHCHD1Q96BP2 118 aaKnown RBP7.6□□□□□ -1.19
SF3A2-205ENST00000590034 MAP1LC3CQ9BXW4 147 aa7.6□□□□□ -1.19
SF3A2-205ENST00000590034 IGLV6-57P01721 117 aa7.59□□□□□ -1.19
SF3A2-205ENST00000590034 ST20-AS1Q8NBB2 130 aa7.59□□□□□ -1.19
SF3A2-205ENST00000590034 PCOTHQ58A44 107 aa7.58□□□□□ -1.2
SF3A2-205ENST00000590034 SPANXB1Q9NS25 103 aaPredicted RBP7.58□□□□□ -1.2
SF3A2-205ENST00000590034 IGLV8-61A0A075B6I0 122 aa7.56□□□□□ -1.2
SF3A2-205ENST00000590034 TRAV23DV6A0A075B6W5 121 aa7.56□□□□□ -1.2
SF3A2-205ENST00000590034 H0Y8G0 127 aa7.56□□□□□ -1.2
SF3A2-205ENST00000590034 EIF4EBP3O60516 100 aaPredicted RBP7.56□□□□□ -1.2
SF3A2-205ENST00000590034 LEPROTO15243 131 aa7.55□□□□□ -1.2
SF3A2-205ENST00000590034 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
SF3A2-205ENST00000590034 S100A7L2Q5SY68 101 aa7.55□□□□□ -1.2
SF3A2-205ENST00000590034 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
SF3A2-205ENST00000590034 YPEL4Q96NS1 127 aa7.55□□□□□ -1.2
SF3A2-205ENST00000590034 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
SF3A2-205ENST00000590034 ZNF73O43830 326 aaPredicted RBP7.54□□□□□ -1.2
SF3A2-205ENST00000590034 NDUFC2O95298 119 aa7.54□□□□□ -1.2
SF3A2-205ENST00000590034 J3QQQ9 107 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 273 ms