RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PLAC8Q9NZF1 115 aa9.6□□□□□ -0.87
ATG4D-211ENST00000589753 PKHD1P08F94 4074 aa9.6□□□□□ -0.87
ATG4D-211ENST00000589753 XGP55808 180 aa9.59□□□□□ -0.87
ATG4D-211ENST00000589753 NPC2P61916 151 aa9.59□□□□□ -0.87
ATG4D-211ENST00000589753 C12orf57Q99622 126 aa9.59□□□□□ -0.87
ATG4D-211ENST00000589753 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
ATG4D-211ENST00000589753 LOC107984156A0A0G2JMH3 177 aa9.58□□□□□ -0.88
ATG4D-211ENST00000589753 CDK2AP2O75956 126 aa9.58□□□□□ -0.88
ATG4D-211ENST00000589753 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
ATG4D-211ENST00000589753 Q6ZVH6 145 aa9.58□□□□□ -0.88
ATG4D-211ENST00000589753 ARL17AQ8IVW1 177 aa9.58□□□□□ -0.88
ATG4D-211ENST00000589753 LINC00308Q8TCZ7 52 aa9.58□□□□□ -0.88
ATG4D-211ENST00000589753 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
ATG4D-211ENST00000589753 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
ATG4D-211ENST00000589753 RPL24P83731 157 aaKnown RBP9.57□□□□□ -0.88
ATG4D-211ENST00000589753 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
ATG4D-211ENST00000589753 SOSTDC1Q6X4U4 206 aa9.57□□□□□ -0.88
ATG4D-211ENST00000589753 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
ATG4D-211ENST00000589753 IFITM1P13164 125 aa9.56□□□□□ -0.88
ATG4D-211ENST00000589753 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
ATG4D-211ENST00000589753 HIGD1BQ9P298 99 aa9.56□□□□□ -0.88
ATG4D-211ENST00000589753 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
ATG4D-211ENST00000589753 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
ATG4D-211ENST00000589753 M0QXV9 152 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 EIF4EBP3O60516 100 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-211ENST00000589753 VPREB1P12018 145 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 C2orf91Q6ZV80 131 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 LINC00518Q8N0U6 118 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 Q8NDZ9 215 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 PRO1933Q9H354 126 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 C22orf24Q9Y442 160 aa9.55□□□□□ -0.88
ATG4D-211ENST00000589753 IGLV5-37A0A075B6J1 123 aa9.54□□□□□ -0.88
ATG4D-211ENST00000589753 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
ATG4D-211ENST00000589753 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
ATG4D-211ENST00000589753 PHF5AQ7RTV0 110 aaKnown RBP9.53□□□□□ -0.88
ATG4D-211ENST00000589753 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
ATG4D-211ENST00000589753 LRP1BQ9NZR2 4599 aa9.53□□□□□ -0.88
ATG4D-211ENST00000589753 NDUFC2O95298 119 aa9.52□□□□□ -0.89
ATG4D-211ENST00000589753 MRPL55Q7Z7F7 128 aaKnown RBP9.52□□□□□ -0.89
ATG4D-211ENST00000589753 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
ATG4D-211ENST00000589753 NCR3O14931 201 aa9.51□□□□□ -0.89
ATG4D-211ENST00000589753 PRR3P79522 188 aaKnown RBP9.51□□□□□ -0.89
ATG4D-211ENST00000589753 LBHQ53QV2 105 aaPredicted RBP9.51□□□□□ -0.89
ATG4D-211ENST00000589753 TSTD3H0UI37 97 aa9.49□□□□□ -0.89
ATG4D-211ENST00000589753 M0R378 163 aa9.49□□□□□ -0.89
ATG4D-211ENST00000589753 HNRNPA3P51991 378 aaKnown RBP9.49□□□□□ -0.89
ATG4D-211ENST00000589753 TAL2Q16559 108 aa9.49□□□□□ -0.89
ATG4D-211ENST00000589753 C7orf33Q8WU49 177 aa9.49□□□□□ -0.89
ATG4D-211ENST00000589753 DNAH8Q96JB1 4490 aa9.49□□□□□ -0.89
ATG4D-211ENST00000589753 TRBV10-2A0A0K0K1G8 114 aa9.48□□□□□ -0.89
ATG4D-211ENST00000589753 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
ATG4D-211ENST00000589753 SMR3BP02814 79 aaPredicted RBP9.48□□□□□ -0.89
ATG4D-211ENST00000589753 UBE2BP63146 152 aa9.48□□□□□ -0.89
ATG4D-211ENST00000589753 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
ATG4D-211ENST00000589753 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.9
ATG4D-211ENST00000589753 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
ATG4D-211ENST00000589753 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
ATG4D-211ENST00000589753 A4D1N5 150 aa9.45□□□□□ -0.9
ATG4D-211ENST00000589753 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
ATG4D-211ENST00000589753 HSD52Q0P140 79 aa9.45□□□□□ -0.9
ATG4D-211ENST00000589753 CEND1Q8N111 149 aa9.45□□□□□ -0.9
ATG4D-211ENST00000589753 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
ATG4D-211ENST00000589753 S100A7L2Q5SY68 101 aa9.44□□□□□ -0.9
ATG4D-211ENST00000589753 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
ATG4D-211ENST00000589753 DDTP30046 118 aa9.43□□□□□ -0.9
ATG4D-211ENST00000589753 APOBP04114 4563 aaKnown RBP9.43□□□□□ -0.9
ATG4D-211ENST00000589753 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
ATG4D-211ENST00000589753 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
ATG4D-211ENST00000589753 OR13C6PQ8NH95 151 aa9.42□□□□□ -0.9
ATG4D-211ENST00000589753 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
ATG4D-211ENST00000589753 IGLV6-57P01721 117 aa9.41□□□□□ -0.9
ATG4D-211ENST00000589753 RPL37AP61513 92 aaKnown RBP9.41□□□□□ -0.9
ATG4D-211ENST00000589753 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
ATG4D-211ENST00000589753 TRAV13-2A0A0B4J235 113 aa9.4□□□□□ -0.9
ATG4D-211ENST00000589753 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
ATG4D-211ENST00000589753 A6NJY4 79 aa9.4□□□□□ -0.9
ATG4D-211ENST00000589753 FXYD2P54710 66 aa9.4□□□□□ -0.9
ATG4D-211ENST00000589753 CTAG1AP78358 180 aa9.4□□□□□ -0.9
ATG4D-211ENST00000589753 TMEM126AQ9H061 195 aa9.4□□□□□ -0.9
ATG4D-211ENST00000589753 A6NDN8 102 aa9.39□□□□□ -0.91
ATG4D-211ENST00000589753 Q8N1X5 172 aa9.39□□□□□ -0.91
ATG4D-211ENST00000589753 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
ATG4D-211ENST00000589753 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
ATG4D-211ENST00000589753 PRYO14603 147 aa9.38□□□□□ -0.91
ATG4D-211ENST00000589753 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
ATG4D-211ENST00000589753 Q5VSD8 79 aa9.38□□□□□ -0.91
ATG4D-211ENST00000589753 REG3GQ6UW15 175 aa9.38□□□□□ -0.91
ATG4D-211ENST00000589753 RYR1P21817 5038 aa9.38□□□□□ -0.91
ATG4D-211ENST00000589753 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
ATG4D-211ENST00000589753 CFC1BP0CG36 223 aa9.37□□□□□ -0.91
ATG4D-211ENST00000589753 CFC1P0CG37 223 aa9.37□□□□□ -0.91
ATG4D-211ENST00000589753 CBY1Q9Y3M2 126 aa9.37□□□□□ -0.91
ATG4D-211ENST00000589753 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
ATG4D-211ENST00000589753 A0A0B4J2C4 111 aa9.36□□□□□ -0.91
ATG4D-211ENST00000589753 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
ATG4D-211ENST00000589753 HERC2O95714 4834 aa9.36□□□□□ -0.91
ATG4D-211ENST00000589753 M0R143 59 aa9.35□□□□□ -0.91
ATG4D-211ENST00000589753 BCE1O60756 84 aa9.35□□□□□ -0.91
ATG4D-211ENST00000589753 BVES-AS1Q5T3Y7 98 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms