RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 LINC00158P58513 81 aa10.05□□□□□ -0.8
DNMT1-221ENST00000589538 RPL24P83731 157 aaKnown RBP10.05□□□□□ -0.8
DNMT1-221ENST00000589538 MYMXA0A1B0GTQ4 84 aa10.04□□□□□ -0.8
DNMT1-221ENST00000589538 ATP6V1G1O75348 118 aa10.04□□□□□ -0.8
DNMT1-221ENST00000589538 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
DNMT1-221ENST00000589538 NDUFA12Q9UI09 145 aa10.04□□□□□ -0.8
DNMT1-221ENST00000589538 FAT3Q8TDW7 4589 aa10.03□□□□□ -0.8
DNMT1-221ENST00000589538 LINC00167Q96N53 147 aa10.03□□□□□ -0.8
DNMT1-221ENST00000589538 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
DNMT1-221ENST00000589538 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
DNMT1-221ENST00000589538 MEIG1Q5JSS6 88 aa10.02□□□□□ -0.81
DNMT1-221ENST00000589538 H0Y9J4 135 aa10.01□□□□□ -0.81
DNMT1-221ENST00000589538 NMUP48645 174 aa10.01□□□□□ -0.81
DNMT1-221ENST00000589538 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
DNMT1-221ENST00000589538 J3QQQ9 107 aa10□□□□□ -0.81
DNMT1-221ENST00000589538 VPREB1P12018 145 aa10□□□□□ -0.81
DNMT1-221ENST00000589538 PET117Q6UWS5 81 aa10□□□□□ -0.81
DNMT1-221ENST00000589538 HERC1Q15751 4861 aa9.99□□□□□ -0.81
DNMT1-221ENST00000589538 GAGE10A6NGK3 116 aa9.99□□□□□ -0.81
DNMT1-221ENST00000589538 RPL37AP8A6NKH3 93 aa9.99□□□□□ -0.81
DNMT1-221ENST00000589538 ZNF861PO60384 105 aa9.99□□□□□ -0.81
DNMT1-221ENST00000589538 BCE1O60756 84 aa9.99□□□□□ -0.81
DNMT1-221ENST00000589538 SMIM13P0DJ93 91 aa9.99□□□□□ -0.81
DNMT1-221ENST00000589538 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
DNMT1-221ENST00000589538 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
DNMT1-221ENST00000589538 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
DNMT1-221ENST00000589538 TSPEAR-AS2P59090 65 aa9.97□□□□□ -0.81
DNMT1-221ENST00000589538 LINC01545Q5VT33 79 aa9.97□□□□□ -0.81
DNMT1-221ENST00000589538 E9PLD3 99 aa9.96□□□□□ -0.82
DNMT1-221ENST00000589538 MIR7-3HGQ8N6C7 128 aa9.96□□□□□ -0.82
DNMT1-221ENST00000589538 IGLV1-50A0A075B6I6 118 aa9.95□□□□□ -0.82
DNMT1-221ENST00000589538 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
DNMT1-221ENST00000589538 IGKV2-28A0A075B6P5 120 aa9.94□□□□□ -0.82
DNMT1-221ENST00000589538 IGKV2D-28P01615 120 aa9.94□□□□□ -0.82
DNMT1-221ENST00000589538 C3orf79P0CE67 100 aa9.94□□□□□ -0.82
DNMT1-221ENST00000589538 C20orf202A1L168 122 aa9.93□□□□□ -0.82
DNMT1-221ENST00000589538 M0R378 163 aa9.93□□□□□ -0.82
DNMT1-221ENST00000589538 AKR1D1P51857 326 aa9.93□□□□□ -0.82
DNMT1-221ENST00000589538 KRTDAPP60985 99 aa9.93□□□□□ -0.82
DNMT1-221ENST00000589538 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
DNMT1-221ENST00000589538 IGKV2D-26A0A0A0MRZ7 120 aa9.92□□□□□ -0.82
DNMT1-221ENST00000589538 UBE2AP49459 152 aa9.92□□□□□ -0.82
DNMT1-221ENST00000589538 Q8NDZ9 215 aa9.91□□□□□ -0.82
DNMT1-221ENST00000589538 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
DNMT1-221ENST00000589538 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
DNMT1-221ENST00000589538 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
DNMT1-221ENST00000589538 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
DNMT1-221ENST00000589538 RPL13AP40429 203 aaKnown RBP9.88□□□□□ -0.83
DNMT1-221ENST00000589538 A0A0J9YXY3 114 aa9.87□□□□□ -0.83
DNMT1-221ENST00000589538 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
DNMT1-221ENST00000589538 S100A12P80511 92 aa9.87□□□□□ -0.83
DNMT1-221ENST00000589538 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
DNMT1-221ENST00000589538 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
DNMT1-221ENST00000589538 NCR3O14931 201 aa9.86□□□□□ -0.83
DNMT1-221ENST00000589538 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
DNMT1-221ENST00000589538 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
DNMT1-221ENST00000589538 DAND5Q8N907 189 aa9.86□□□□□ -0.83
DNMT1-221ENST00000589538 TRBV10-2A0A0K0K1G8 114 aa9.85□□□□□ -0.83
DNMT1-221ENST00000589538 PRYO14603 147 aa9.85□□□□□ -0.83
DNMT1-221ENST00000589538 S100A6P06703 90 aa9.85□□□□□ -0.83
DNMT1-221ENST00000589538 S100A2P29034 98 aa9.85□□□□□ -0.83
DNMT1-221ENST00000589538 TIMM17BO60830 172 aa9.84□□□□□ -0.83
DNMT1-221ENST00000589538 NDUFC2O95298 119 aa9.84□□□□□ -0.83
DNMT1-221ENST00000589538 TNXBP22105 4242 aa9.83□□□□□ -0.84
DNMT1-221ENST00000589538 ZNF815PA8K554 130 aa9.83□□□□□ -0.84
DNMT1-221ENST00000589538 HIST3H2BBQ8N257 126 aa9.83□□□□□ -0.84
DNMT1-221ENST00000589538 KCNQ1DNQ9H478 68 aa9.83□□□□□ -0.84
DNMT1-221ENST00000589538 SPANXB1Q9NS25 103 aaPredicted RBP9.83□□□□□ -0.84
DNMT1-221ENST00000589538 SNRPEP62304 92 aaKnown RBP9.81□□□□□ -0.84
DNMT1-221ENST00000589538 PRLHP81277 87 aa9.81□□□□□ -0.84
DNMT1-221ENST00000589538 TRBV10-3A0A0K0K1G6 114 aa9.8□□□□□ -0.84
DNMT1-221ENST00000589538 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
DNMT1-221ENST00000589538 LINC00337Q8N6G1 96 aa9.8□□□□□ -0.84
DNMT1-221ENST00000589538 HIST1H2BLQ99880 126 aa9.8□□□□□ -0.84
DNMT1-221ENST00000589538 CRYGAP11844 174 aa9.79□□□□□ -0.84
DNMT1-221ENST00000589538 DDTP30046 118 aa9.79□□□□□ -0.84
DNMT1-221ENST00000589538 SPRR1AP35321 89 aa9.79□□□□□ -0.84
DNMT1-221ENST00000589538 CBY1Q9Y3M2 126 aa9.79□□□□□ -0.84
DNMT1-221ENST00000589538 ETDCA0A1B0GVM5 59 aa9.78□□□□□ -0.84
DNMT1-221ENST00000589538 FAM229BQ4G0N7 80 aa9.78□□□□□ -0.84
DNMT1-221ENST00000589538 S100A7L2Q5SY68 101 aa9.78□□□□□ -0.84
DNMT1-221ENST00000589538 LITAFQ99732 161 aa9.78□□□□□ -0.84
DNMT1-221ENST00000589538 SOSTDC1Q6X4U4 206 aa9.77□□□□□ -0.85
DNMT1-221ENST00000589538 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
DNMT1-221ENST00000589538 ATOH7Q8N100 152 aa9.77□□□□□ -0.85
DNMT1-221ENST00000589538 COPS9Q8WXC6 57 aa9.77□□□□□ -0.85
DNMT1-221ENST00000589538 HIGD2AQ9BW72 106 aa9.77□□□□□ -0.85
DNMT1-221ENST00000589538 NPC2P61916 151 aa9.76□□□□□ -0.85
DNMT1-221ENST00000589538 ANKRD39Q53RE8 183 aa9.76□□□□□ -0.85
DNMT1-221ENST00000589538 LINC00308Q8TCZ7 52 aa9.76□□□□□ -0.85
DNMT1-221ENST00000589538 TTTY13Q9BZ97 58 aa9.76□□□□□ -0.85
DNMT1-221ENST00000589538 SPANXCQ9NY87 97 aa9.76□□□□□ -0.85
DNMT1-221ENST00000589538 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
DNMT1-221ENST00000589538 ZNF706Q9Y5V0 76 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-221ENST00000589538 KRTAP4-16G5E9R7 235 aaPredicted RBP9.74□□□□□ -0.85
DNMT1-221ENST00000589538 A0A087X002 238 aa9.73□□□□□ -0.85
DNMT1-221ENST00000589538 HSBP1L1C9JCN9 74 aa9.73□□□□□ -0.85
DNMT1-221ENST00000589538 EIF4EBP3O60516 100 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-221ENST00000589538 TYMSOSQ8TAI1 123 aa9.73□□□□□ -0.85
DNMT1-221ENST00000589538 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms