RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
H3F3B-207ENST00000589417 LEPROTO15243 131 aa10.66□□□□□ -0.7
H3F3B-207ENST00000589417 IGKCP01834 107 aa10.66□□□□□ -0.7
H3F3B-207ENST00000589417 VPREB1P12018 145 aa10.66□□□□□ -0.7
H3F3B-207ENST00000589417 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
H3F3B-207ENST00000589417 H0Y9J4 135 aa10.65□□□□□ -0.7
H3F3B-207ENST00000589417 S100A1P23297 94 aa10.65□□□□□ -0.7
H3F3B-207ENST00000589417 RPL24P83731 157 aaKnown RBP10.65□□□□□ -0.7
H3F3B-207ENST00000589417 NKAPP1Q8N9T2 125 aa10.65□□□□□ -0.7
H3F3B-207ENST00000589417 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.7
H3F3B-207ENST00000589417 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
H3F3B-207ENST00000589417 SYS1-DBNDD2H3BUS1 97 aa10.64□□□□□ -0.71
H3F3B-207ENST00000589417 ZNF861PO60384 105 aa10.64□□□□□ -0.71
H3F3B-207ENST00000589417 LINC00158P58513 81 aa10.64□□□□□ -0.71
H3F3B-207ENST00000589417 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
H3F3B-207ENST00000589417 BCE1O60756 84 aa10.62□□□□□ -0.71
H3F3B-207ENST00000589417 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
H3F3B-207ENST00000589417 HERVK_113P61574 105 aa10.62□□□□□ -0.71
H3F3B-207ENST00000589417 RPL37AP8A6NKH3 93 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 J3QQQ9 107 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 SMIM13P0DJ93 91 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 NMUP48645 174 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 LINC01545Q5VT33 79 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 PET117Q6UWS5 81 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 Q8NDZ9 215 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 HMCN2Q8NDA2 5059 aa10.61□□□□□ -0.71
H3F3B-207ENST00000589417 IGLV1-50A0A075B6I6 118 aa10.6□□□□□ -0.71
H3F3B-207ENST00000589417 LOC107984156A0A0G2JMH3 177 aa10.59□□□□□ -0.71
H3F3B-207ENST00000589417 GAGE10A6NGK3 116 aa10.59□□□□□ -0.71
H3F3B-207ENST00000589417 MEIG1Q5JSS6 88 aa10.59□□□□□ -0.71
H3F3B-207ENST00000589417 ARL17AQ8IVW1 177 aa10.59□□□□□ -0.71
H3F3B-207ENST00000589417 E9PLD3 99 aa10.58□□□□□ -0.72
H3F3B-207ENST00000589417 KRTAP1-4P0C5Y4 121 aa10.58□□□□□ -0.72
H3F3B-207ENST00000589417 MIR7-3HGQ8N6C7 128 aa10.58□□□□□ -0.72
H3F3B-207ENST00000589417 A0A0U1RRA0 63 aa10.57□□□□□ -0.72
H3F3B-207ENST00000589417 ATP6V1G1O75348 118 aa10.57□□□□□ -0.72
H3F3B-207ENST00000589417 RPL28P46779 137 aaKnown RBP10.57□□□□□ -0.72
H3F3B-207ENST00000589417 KRTAP13-1Q8IUC0 172 aa10.57□□□□□ -0.72
H3F3B-207ENST00000589417 M0R378 163 aa10.55□□□□□ -0.72
H3F3B-207ENST00000589417 C3orf79P0CE67 100 aa10.55□□□□□ -0.72
H3F3B-207ENST00000589417 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
H3F3B-207ENST00000589417 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
H3F3B-207ENST00000589417 IGKV2D-26A0A0A0MRZ7 120 aa10.54□□□□□ -0.72
H3F3B-207ENST00000589417 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
H3F3B-207ENST00000589417 BOD1L2Q8IYS8 172 aa10.53□□□□□ -0.72
H3F3B-207ENST00000589417 TMEM126AQ9H061 195 aa10.53□□□□□ -0.72
H3F3B-207ENST00000589417 PRR26Q8N8Z3 221 aa10.51□□□□□ -0.73
H3F3B-207ENST00000589417 A0A0J9YXY3 114 aa10.49□□□□□ -0.73
H3F3B-207ENST00000589417 TMEM238C9JI98 176 aa10.49□□□□□ -0.73
H3F3B-207ENST00000589417 UBE2AP49459 152 aa10.49□□□□□ -0.73
H3F3B-207ENST00000589417 RPL13AP40429 203 aaKnown RBP10.48□□□□□ -0.73
H3F3B-207ENST00000589417 KRTDAPP60985 99 aa10.48□□□□□ -0.73
H3F3B-207ENST00000589417 KCNQ1DNQ9H478 68 aa10.48□□□□□ -0.73
H3F3B-207ENST00000589417 TRBV10-2A0A0K0K1G8 114 aa10.47□□□□□ -0.73
H3F3B-207ENST00000589417 NDUFC2O95298 119 aa10.47□□□□□ -0.73
H3F3B-207ENST00000589417 AKR1D1P51857 326 aa10.47□□□□□ -0.73
H3F3B-207ENST00000589417 DAND5Q8N907 189 aa10.47□□□□□ -0.73
H3F3B-207ENST00000589417 C20orf202A1L168 122 aa10.46□□□□□ -0.73
H3F3B-207ENST00000589417 TIMM17BO60830 172 aa10.46□□□□□ -0.73
H3F3B-207ENST00000589417 SPRR1AP35321 89 aa10.46□□□□□ -0.73
H3F3B-207ENST00000589417 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.73
H3F3B-207ENST00000589417 PRYO14603 147 aa10.45□□□□□ -0.74
H3F3B-207ENST00000589417 FAM19A1Q7Z5A9 133 aa10.45□□□□□ -0.74
H3F3B-207ENST00000589417 HIST3H2BBQ8N257 126 aa10.44□□□□□ -0.74
H3F3B-207ENST00000589417 LINC00337Q8N6G1 96 aa10.44□□□□□ -0.74
H3F3B-207ENST00000589417 LITAFQ99732 161 aa10.44□□□□□ -0.74
H3F3B-207ENST00000589417 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
H3F3B-207ENST00000589417 NCR3O14931 201 aa10.43□□□□□ -0.74
H3F3B-207ENST00000589417 PRLHP81277 87 aa10.43□□□□□ -0.74
H3F3B-207ENST00000589417 SOSTDC1Q6X4U4 206 aa10.43□□□□□ -0.74
H3F3B-207ENST00000589417 MIEN1Q9BRT3 115 aa10.43□□□□□ -0.74
H3F3B-207ENST00000589417 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
H3F3B-207ENST00000589417 TRBV10-3A0A0K0K1G6 114 aa10.42□□□□□ -0.74
H3F3B-207ENST00000589417 HIST1H2BLQ99880 126 aa10.42□□□□□ -0.74
H3F3B-207ENST00000589417 ZNF815PA8K554 130 aa10.41□□□□□ -0.74
H3F3B-207ENST00000589417 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
H3F3B-207ENST00000589417 FAM229BQ4G0N7 80 aa10.41□□□□□ -0.74
H3F3B-207ENST00000589417 IGLV6-57P01721 117 aa10.4□□□□□ -0.74
H3F3B-207ENST00000589417 CRYGAP11844 174 aa10.4□□□□□ -0.74
H3F3B-207ENST00000589417 A0A087X002 238 aa10.39□□□□□ -0.75
H3F3B-207ENST00000589417 SNRPEP62304 92 aaKnown RBP10.39□□□□□ -0.75
H3F3B-207ENST00000589417 S100A2P29034 98 aa10.38□□□□□ -0.75
H3F3B-207ENST00000589417 DDTP30046 118 aa10.38□□□□□ -0.75
H3F3B-207ENST00000589417 S100A12P80511 92 aa10.38□□□□□ -0.75
H3F3B-207ENST00000589417 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
H3F3B-207ENST00000589417 LINC00308Q8TCZ7 52 aa10.38□□□□□ -0.75
H3F3B-207ENST00000589417 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
H3F3B-207ENST00000589417 S100A6P06703 90 aa10.37□□□□□ -0.75
H3F3B-207ENST00000589417 PPDPFQ9H3Y8 114 aa10.36□□□□□ -0.75
H3F3B-207ENST00000589417 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
H3F3B-207ENST00000589417 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
H3F3B-207ENST00000589417 ETDCA0A1B0GVM5 59 aa10.34□□□□□ -0.75
H3F3B-207ENST00000589417 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
H3F3B-207ENST00000589417 ANAPC11Q9NYG5 84 aa10.34□□□□□ -0.75
H3F3B-207ENST00000589417 B5MCH6 92 aa10.33□□□□□ -0.76
H3F3B-207ENST00000589417 NPC2P61916 151 aa10.33□□□□□ -0.76
H3F3B-207ENST00000589417 KRTAP13-2Q52LG2 175 aa10.33□□□□□ -0.76
H3F3B-207ENST00000589417 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
H3F3B-207ENST00000589417 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
H3F3B-207ENST00000589417 SPANXDQ9BXN6 97 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms