RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	BCE1	O60756	84 aa		10.52	□□□□□ -0.72
DDX39A-209	ENST00000589318	LELP1	Q5T871	98 aa		10.52	□□□□□ -0.72
DDX39A-209	ENST00000589318	FAM218A	Q96MZ4	157 aa		10.52	□□□□□ -0.72
DDX39A-209	ENST00000589318	DEFB131B	A0A096LNP1	70 aa		10.52	□□□□□ -0.73
DDX39A-209	ENST00000589318	CRP	P02741	224 aa		10.52	□□□□□ -0.73
DDX39A-209	ENST00000589318		Q8N3U1	123 aa		10.52	□□□□□ -0.73
DDX39A-209	ENST00000589318	LYPD5	Q6UWN5	251 aa		10.51	□□□□□ -0.73
DDX39A-209	ENST00000589318	SOSTDC1	Q6X4U4	206 aa		10.51	□□□□□ -0.73
DDX39A-209	ENST00000589318	ZNF625	Q96I27	306 aa	Predicted RBP	10.51	□□□□□ -0.73
DDX39A-209	ENST00000589318	DSCR8	Q96T75	97 aa		10.51	□□□□□ -0.73
DDX39A-209	ENST00000589318	CYSTM1	Q9H1C7	97 aa		10.51	□□□□□ -0.73
DDX39A-209	ENST00000589318	LINC01561	Q8N1V8	128 aa		10.5	□□□□□ -0.73
DDX39A-209	ENST00000589318	C4orf26	Q17RF5	130 aa		10.5	□□□□□ -0.73
DDX39A-209	ENST00000589318	IGKV3OR2-268	A0A0C4DH90	116 aa		10.49	□□□□□ -0.73
DDX39A-209	ENST00000589318	TRBV10-3	A0A0K0K1G6	114 aa		10.49	□□□□□ -0.73
DDX39A-209	ENST00000589318	OXT	P01178	125 aa		10.49	□□□□□ -0.73
DDX39A-209	ENST00000589318	LINC00846	Q9NV44	126 aa		10.49	□□□□□ -0.73
DDX39A-209	ENST00000589318	IGKV3D-7	A0A0C4DH55	119 aa		10.48	□□□□□ -0.73
DDX39A-209	ENST00000589318	LINC00959	A0A1B0GUT2	108 aa		10.48	□□□□□ -0.73
DDX39A-209	ENST00000589318	HRCT1	Q6UXD1	115 aa		10.48	□□□□□ -0.73
DDX39A-209	ENST00000589318	B9D2	Q9BPU9	175 aa		10.48	□□□□□ -0.73
DDX39A-209	ENST00000589318	SMIM1	B2RUZ4	78 aa		10.48	□□□□□ -0.73
DDX39A-209	ENST00000589318	EPM2A	B3EWF7	344 aa		10.47	□□□□□ -0.73
DDX39A-209	ENST00000589318	PRO0628	Q9UI54	55 aa		10.47	□□□□□ -0.73
DDX39A-209	ENST00000589318	SERP1	Q9Y6X1	66 aa		10.47	□□□□□ -0.73
DDX39A-209	ENST00000589318	STAB2	Q8WWQ8	2551 aa		10.47	□□□□□ -0.73
DDX39A-209	ENST00000589318	TRAV10	A0A0B4J240	114 aa		10.46	□□□□□ -0.73
DDX39A-209	ENST00000589318	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.46	□□□□□ -0.73
DDX39A-209	ENST00000589318		Q9HAA7	133 aa		10.46	□□□□□ -0.73
DDX39A-209	ENST00000589318	C14orf132	Q9NPU4	83 aa		10.46	□□□□□ -0.73
DDX39A-209	ENST00000589318	CLPSL2	Q6UWE3	100 aa		10.46	□□□□□ -0.74
DDX39A-209	ENST00000589318	LINC00269	Q8N2A0	174 aa		10.45	□□□□□ -0.74
DDX39A-209	ENST00000589318	FAM236D	A0A1B0GTK5	79 aa		10.45	□□□□□ -0.74
DDX39A-209	ENST00000589318	CCK	P06307	115 aa		10.45	□□□□□ -0.74
DDX39A-209	ENST00000589318	FAM236C	P0DP71	79 aa		10.45	□□□□□ -0.74
DDX39A-209	ENST00000589318	ESRG	Q1W209	222 aa		10.45	□□□□□ -0.74
DDX39A-209	ENST00000589318	JMJD7-PLA2G4B	H0Y9G9	81 aa		10.44	□□□□□ -0.74
DDX39A-209	ENST00000589318	ANG	P03950	147 aa	Known RBP	10.44	□□□□□ -0.74
DDX39A-209	ENST00000589318	PRKDC	P78527	4128 aa	Known RBP	10.44	□□□□□ -0.74
DDX39A-209	ENST00000589318	KRTAP21-3	Q3LHN1	58 aa		10.43	□□□□□ -0.74
DDX39A-209	ENST00000589318	GHRH	P01286	108 aa		10.43	□□□□□ -0.74
DDX39A-209	ENST00000589318	REG3A	Q06141	175 aa		10.43	□□□□□ -0.74
DDX39A-209	ENST00000589318	WFDC10B	Q8IUB3	73 aa		10.43	□□□□□ -0.74
DDX39A-209	ENST00000589318		A0A087WVE0	104 aa		10.42	□□□□□ -0.74
DDX39A-209	ENST00000589318		A0A087WZ39	114 aa		10.42	□□□□□ -0.74
DDX39A-209	ENST00000589318	PFN2	P35080	140 aa		10.42	□□□□□ -0.74
DDX39A-209	ENST00000589318	SS18	Q15532	418 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318	SND1-IT1	Q9HBX3	110 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318	PRR34	Q9NV39	138 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318	ORMDL1	Q9P0S3	153 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318	MEGF8	Q7Z7M0	2845 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318		A0A0U1RRA0	63 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318	XCL1	P47992	114 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318	SMIM11B	Q8TCY0	68 aa		10.41	□□□□□ -0.74
DDX39A-209	ENST00000589318		A0A087WYN8	130 aa		10.4	□□□□□ -0.74
DDX39A-209	ENST00000589318	LINC00337	Q8N6G1	96 aa		10.4	□□□□□ -0.74
DDX39A-209	ENST00000589318	KLK12	Q9UKR0	248 aa		10.39	□□□□□ -0.75
DDX39A-209	ENST00000589318	IGKV2-28	A0A075B6P5	120 aa		10.38	□□□□□ -0.75
DDX39A-209	ENST00000589318	IGKV2D-28	P01615	120 aa		10.38	□□□□□ -0.75
DDX39A-209	ENST00000589318	ENHO	Q6UWT2	76 aa		10.38	□□□□□ -0.75
DDX39A-209	ENST00000589318	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.38	□□□□□ -0.75
DDX39A-209	ENST00000589318	LINC00167	Q96N53	147 aa		10.38	□□□□□ -0.75
DDX39A-209	ENST00000589318	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.38	□□□□□ -0.75
DDX39A-209	ENST00000589318	IGLV10-54	A0A075B6I4	117 aa		10.37	□□□□□ -0.75
DDX39A-209	ENST00000589318	CD164L2	Q6UWJ8	174 aa		10.37	□□□□□ -0.75
DDX39A-209	ENST00000589318	TRAV7	A0A075B6U4	112 aa		10.37	□□□□□ -0.75
DDX39A-209	ENST00000589318	SMIM26	A0A096LP01	95 aa		10.36	□□□□□ -0.75
DDX39A-209	ENST00000589318	LECT2	O14960	151 aa		10.36	□□□□□ -0.75
DDX39A-209	ENST00000589318	ATP5E	P56381	51 aa	Predicted RBP	10.36	□□□□□ -0.75
DDX39A-209	ENST00000589318	C9orf129	Q5T035	196 aa	Known RBP	10.35	□□□□□ -0.75
DDX39A-209	ENST00000589318	MIR7-3HG	Q8N6C7	128 aa		10.35	□□□□□ -0.75
DDX39A-209	ENST00000589318	COX7B2	Q8TF08	81 aa		10.35	□□□□□ -0.75
DDX39A-209	ENST00000589318	UBL5	Q9BZL1	73 aa		10.35	□□□□□ -0.75
DDX39A-209	ENST00000589318	IBA57-AS1	B1ANH7	110 aa		10.35	□□□□□ -0.75
DDX39A-209	ENST00000589318		F8WDY8	70 aa		10.35	□□□□□ -0.75
DDX39A-209	ENST00000589318	NCR3	O14931	201 aa		10.35	□□□□□ -0.75
DDX39A-209	ENST00000589318	TMEM256-PLSCR3	K7ERE1	68 aa		10.34	□□□□□ -0.75
DDX39A-209	ENST00000589318	NDUFC1	O43677	76 aa		10.34	□□□□□ -0.75
DDX39A-209	ENST00000589318	KLKP1	Q107X0	134 aa		10.34	□□□□□ -0.75
DDX39A-209	ENST00000589318	LINC01556	Q5JQF7	62 aa		10.34	□□□□□ -0.75
DDX39A-209	ENST00000589318	LINC00588	Q9Y4M8	146 aa		10.34	□□□□□ -0.75
DDX39A-209	ENST00000589318	CSMD3	Q7Z407	3707 aa		10.33	□□□□□ -0.76
DDX39A-209	ENST00000589318	C20orf197	Q8N268	126 aa		10.33	□□□□□ -0.76
DDX39A-209	ENST00000589318	TOMM7	Q9P0U1	55 aa		10.33	□□□□□ -0.76
DDX39A-209	ENST00000589318		H7BZZ5	65 aa		10.32	□□□□□ -0.76
DDX39A-209	ENST00000589318	TRAV23DV6	A0A075B6W5	121 aa		10.31	□□□□□ -0.76
DDX39A-209	ENST00000589318	DNAH10OS	P0CZ25	163 aa		10.31	□□□□□ -0.76
DDX39A-209	ENST00000589318	DNAH7	Q8WXX0	4024 aa		10.3	□□□□□ -0.76
DDX39A-209	ENST00000589318	CCL18	P55774	89 aa		10.3	□□□□□ -0.76
DDX39A-209	ENST00000589318	LINC00158	P58513	81 aa		10.3	□□□□□ -0.76
DDX39A-209	ENST00000589318	KIAA0087	Q14695	138 aa		10.3	□□□□□ -0.76
DDX39A-209	ENST00000589318	KRTAP26-1	Q6PEX3	210 aa		10.3	□□□□□ -0.76
DDX39A-209	ENST00000589318		Q8IZM0	81 aa		10.3	□□□□□ -0.76
DDX39A-209	ENST00000589318	DNAH1	Q9P2D7	4330 aa		10.3	□□□□□ -0.76
DDX39A-209	ENST00000589318	LYST	Q99698	3801 aa		10.29	□□□□□ -0.76
DDX39A-209	ENST00000589318	LINC00336	Q6ZUF6	198 aa		10.29	□□□□□ -0.76
DDX39A-209	ENST00000589318	C6orf226	Q5I0X4	101 aa		10.27	□□□□□ -0.77
DDX39A-209	ENST00000589318	FAM19A1	Q7Z5A9	133 aa		10.26	□□□□□ -0.77
DDX39A-209	ENST00000589318	APLN	Q9ULZ1	77 aa		10.26	□□□□□ -0.77
DDX39A-209	ENST00000589318		H3BQ85	93 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms