RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 NKAPP1Q8N9T2 125 aa12.05□□□□□ -0.48
LINC00654-202ENST00000589201 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
LINC00654-202ENST00000589201 H0Y9J4 135 aa12.04□□□□□ -0.48
LINC00654-202ENST00000589201 DPM2O94777 84 aa12.04□□□□□ -0.48
LINC00654-202ENST00000589201 MAP1LC3CQ9BXW4 147 aa12.04□□□□□ -0.48
LINC00654-202ENST00000589201 VPREB1P12018 145 aa12.02□□□□□ -0.49
LINC00654-202ENST00000589201 ZNF861PO60384 105 aa12.01□□□□□ -0.49
LINC00654-202ENST00000589201 IGKCP01834 107 aa12.01□□□□□ -0.49
LINC00654-202ENST00000589201 SMIM13P0DJ93 91 aa12.01□□□□□ -0.49
LINC00654-202ENST00000589201 TSPEAR-AS2P59090 65 aa12.01□□□□□ -0.49
LINC00654-202ENST00000589201 Q8NDZ9 215 aa12.01□□□□□ -0.49
LINC00654-202ENST00000589201 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
LINC00654-202ENST00000589201 LEPROTO15243 131 aa12□□□□□ -0.49
LINC00654-202ENST00000589201 HERV-K104P63124 156 aa12□□□□□ -0.49
LINC00654-202ENST00000589201 RPL24P83731 157 aaKnown RBP12□□□□□ -0.49
LINC00654-202ENST00000589201 MYMXA0A1B0GTQ4 84 aa11.99□□□□□ -0.49
LINC00654-202ENST00000589201 BCE1O60756 84 aa11.99□□□□□ -0.49
LINC00654-202ENST00000589201 MEIG1Q5JSS6 88 aa11.99□□□□□ -0.49
LINC00654-202ENST00000589201 IGKV2-28A0A075B6P5 120 aa11.98□□□□□ -0.49
LINC00654-202ENST00000589201 IGKV2D-28P01615 120 aa11.98□□□□□ -0.49
LINC00654-202ENST00000589201 PLEKHB2Q96CS7 222 aa11.98□□□□□ -0.49
LINC00654-202ENST00000589201 SYS1-DBNDD2H3BUS1 97 aa11.97□□□□□ -0.49
LINC00654-202ENST00000589201 ATP6V1G1O75348 118 aa11.97□□□□□ -0.49
LINC00654-202ENST00000589201 HERVK_113P61574 105 aa11.97□□□□□ -0.49
LINC00654-202ENST00000589201 J3QQQ9 107 aa11.96□□□□□ -0.49
LINC00654-202ENST00000589201 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.49
LINC00654-202ENST00000589201 IGLV1-50A0A075B6I6 118 aa11.95□□□□□ -0.5
LINC00654-202ENST00000589201 LINC00587B1AMM8 73 aa11.95□□□□□ -0.5
LINC00654-202ENST00000589201 KRTAP1-4P0C5Y4 121 aa11.95□□□□□ -0.5
LINC00654-202ENST00000589201 COA6Q5JTJ3 125 aaKnown RBP11.95□□□□□ -0.5
LINC00654-202ENST00000589201 PRR26Q8N8Z3 221 aa11.95□□□□□ -0.5
LINC00654-202ENST00000589201 RPL28P46779 137 aaKnown RBP11.94□□□□□ -0.5
LINC00654-202ENST00000589201 LGALS3P17931 250 aaKnown RBP11.92□□□□□ -0.5
LINC00654-202ENST00000589201 BOD1L2Q8IYS8 172 aa11.92□□□□□ -0.5
LINC00654-202ENST00000589201 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
LINC00654-202ENST00000589201 LINC01545Q5VT33 79 aa11.91□□□□□ -0.5
LINC00654-202ENST00000589201 PET117Q6UWS5 81 aa11.91□□□□□ -0.5
LINC00654-202ENST00000589201 S100A1P23297 94 aa11.9□□□□□ -0.5
LINC00654-202ENST00000589201 NMUP48645 174 aa11.9□□□□□ -0.5
LINC00654-202ENST00000589201 UBE2AP49459 152 aa11.9□□□□□ -0.5
LINC00654-202ENST00000589201 KRTAP13-1Q8IUC0 172 aa11.9□□□□□ -0.5
LINC00654-202ENST00000589201 E9PLD3 99 aa11.89□□□□□ -0.51
LINC00654-202ENST00000589201 M0R378 163 aa11.89□□□□□ -0.51
LINC00654-202ENST00000589201 C3orf79P0CE67 100 aa11.89□□□□□ -0.51
LINC00654-202ENST00000589201 DAND5Q8N907 189 aa11.89□□□□□ -0.51
LINC00654-202ENST00000589201 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
LINC00654-202ENST00000589201 KRTDAPP60985 99 aa11.86□□□□□ -0.51
LINC00654-202ENST00000589201 FAM19A1Q7Z5A9 133 aa11.86□□□□□ -0.51
LINC00654-202ENST00000589201 NCR3O14931 201 aa11.85□□□□□ -0.51
LINC00654-202ENST00000589201 PRLHP81277 87 aa11.85□□□□□ -0.51
LINC00654-202ENST00000589201 LOC107984156A0A0G2JMH3 177 aa11.84□□□□□ -0.51
LINC00654-202ENST00000589201 ARL17AQ8IVW1 177 aa11.84□□□□□ -0.51
LINC00654-202ENST00000589201 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
LINC00654-202ENST00000589201 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
LINC00654-202ENST00000589201 RPL13AP40429 203 aaKnown RBP11.81□□□□□ -0.52
LINC00654-202ENST00000589201 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
LINC00654-202ENST00000589201 UBR4Q5T4S7 5183 aa11.8□□□□□ -0.52
LINC00654-202ENST00000589201 MIEN1Q9BRT3 115 aa11.79□□□□□ -0.52
LINC00654-202ENST00000589201 ANAPC11Q9NYG5 84 aa11.79□□□□□ -0.52
LINC00654-202ENST00000589201 A0A087X002 238 aa11.78□□□□□ -0.52
LINC00654-202ENST00000589201 TRBV10-3A0A0K0K1G6 114 aa11.78□□□□□ -0.52
LINC00654-202ENST00000589201 NPC2P61916 151 aa11.78□□□□□ -0.52
LINC00654-202ENST00000589201 KCNQ1DNQ9H478 68 aa11.78□□□□□ -0.52
LINC00654-202ENST00000589201 PRYO14603 147 aa11.77□□□□□ -0.53
LINC00654-202ENST00000589201 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
LINC00654-202ENST00000589201 SOSTDC1Q6X4U4 206 aa11.77□□□□□ -0.53
LINC00654-202ENST00000589201 TTTY13Q9BZ97 58 aa11.77□□□□□ -0.53
LINC00654-202ENST00000589201 C20orf202A1L168 122 aa11.76□□□□□ -0.53
LINC00654-202ENST00000589201 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
LINC00654-202ENST00000589201 ZNF815PA8K554 130 aa11.75□□□□□ -0.53
LINC00654-202ENST00000589201 CRYGAP11844 174 aa11.75□□□□□ -0.53
LINC00654-202ENST00000589201 SPRR1AP35321 89 aa11.75□□□□□ -0.53
LINC00654-202ENST00000589201 LITAFQ99732 161 aa11.75□□□□□ -0.53
LINC00654-202ENST00000589201 LRP2P98164 4655 aa11.74□□□□□ -0.53
LINC00654-202ENST00000589201 NDUFC2O95298 119 aa11.74□□□□□ -0.53
LINC00654-202ENST00000589201 ATOH7Q8N100 152 aa11.74□□□□□ -0.53
LINC00654-202ENST00000589201 HIST3H2BBQ8N257 126 aa11.74□□□□□ -0.53
LINC00654-202ENST00000589201 LINC00337Q8N6G1 96 aa11.74□□□□□ -0.53
LINC00654-202ENST00000589201 HIGD2AQ9BW72 106 aa11.74□□□□□ -0.53
LINC00654-202ENST00000589201 SPANXB1Q9NS25 103 aaPredicted RBP11.74□□□□□ -0.53
LINC00654-202ENST00000589201 DDTP30046 118 aa11.73□□□□□ -0.53
LINC00654-202ENST00000589201 KRTAP4-16G5E9R7 235 aaPredicted RBP11.72□□□□□ -0.53
LINC00654-202ENST00000589201 TIMM17BO60830 172 aa11.72□□□□□ -0.53
LINC00654-202ENST00000589201 ANKRD39Q53RE8 183 aa11.72□□□□□ -0.53
LINC00654-202ENST00000589201 FAM229BQ4G0N7 80 aa11.71□□□□□ -0.53
LINC00654-202ENST00000589201 TYMSOSQ8TAI1 123 aa11.71□□□□□ -0.53
LINC00654-202ENST00000589201 HIST1H2BLQ99880 126 aa11.71□□□□□ -0.53
LINC00654-202ENST00000589201 ETDCA0A1B0GVM5 59 aa11.7□□□□□ -0.54
LINC00654-202ENST00000589201 S100A2P29034 98 aa11.7□□□□□ -0.54
LINC00654-202ENST00000589201 S100A12P80511 92 aa11.7□□□□□ -0.54
LINC00654-202ENST00000589201 KRTAP13-2Q52LG2 175 aa11.7□□□□□ -0.54
LINC00654-202ENST00000589201 LINC00308Q8TCZ7 52 aa11.7□□□□□ -0.54
LINC00654-202ENST00000589201 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
LINC00654-202ENST00000589201 S100A7L2Q5SY68 101 aa11.69□□□□□ -0.54
LINC00654-202ENST00000589201 S100A6P06703 90 aa11.68□□□□□ -0.54
LINC00654-202ENST00000589201 AKR1D1P51857 326 aa11.67□□□□□ -0.54
LINC00654-202ENST00000589201 B5MCH6 92 aa11.66□□□□□ -0.54
LINC00654-202ENST00000589201 SMCR5Q8TEV8 140 aa11.66□□□□□ -0.54
LINC00654-202ENST00000589201 SPRR4Q96PI1 79 aa11.65□□□□□ -0.54
LINC00654-202ENST00000589201 SPANXCQ9NY87 97 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms