RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TRAV8-4A0A0B4J246 113 aa4.81□□□□□ -1.64
ATG4D-210ENST00000588972 LINC00959A0A1B0GUT2 108 aa4.81□□□□□ -1.64
ATG4D-210ENST00000588972 IFI27P40305 119 aaPredicted RBP4.81□□□□□ -1.64
ATG4D-210ENST00000588972 XCL1P47992 114 aa4.81□□□□□ -1.64
ATG4D-210ENST00000588972 HERVK_113P61574 105 aa4.81□□□□□ -1.64
ATG4D-210ENST00000588972 SMAGPQ0VAQ4 97 aa4.81□□□□□ -1.64
ATG4D-210ENST00000588972 FAM104AQ969W3 186 aa4.81□□□□□ -1.64
ATG4D-210ENST00000588972 LRP2P98164 4655 aa4.81□□□□□ -1.64
ATG4D-210ENST00000588972 CCL25O15444 150 aa4.8□□□□□ -1.64
ATG4D-210ENST00000588972 S100A2P29034 98 aa4.8□□□□□ -1.64
ATG4D-210ENST00000588972 Q6ZSA8 131 aa4.8□□□□□ -1.64
ATG4D-210ENST00000588972 TNXBP22105 4242 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 HBDP02042 147 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 HIST3H2BBQ8N257 126 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 TIMM21Q9BVV7 248 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 SPANXA1Q9NS26 97 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 V9GYY9 64 aa4.79□□□□□ -1.64
ATG4D-210ENST00000588972 ZNF861PO60384 105 aa4.78□□□□□ -1.64
ATG4D-210ENST00000588972 SS18Q15532 418 aa4.78□□□□□ -1.64
ATG4D-210ENST00000588972 HSPB8Q9UJY1 196 aa4.78□□□□□ -1.64
ATG4D-210ENST00000588972 CYSLTR1Q9Y271 337 aa4.78□□□□□ -1.64
ATG4D-210ENST00000588972 LEPROTL1O95214 131 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 AKR1D1P51857 326 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 S100A12P80511 92 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 MRPS36P82909 103 aaKnown RBP4.77□□□□□ -1.65
ATG4D-210ENST00000588972 PDZD11Q5EBL8 140 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 TOMM6Q96B49 74 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 LINC00526Q96FQ7 95 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 TMEM141Q96I45 108 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 HIST1H2BLQ99880 126 aa4.77□□□□□ -1.65
ATG4D-210ENST00000588972 NUPR1O60356 82 aa4.76□□□□□ -1.65
ATG4D-210ENST00000588972 SMIM6P0DI80 62 aa4.76□□□□□ -1.65
ATG4D-210ENST00000588972 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
ATG4D-210ENST00000588972 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
ATG4D-210ENST00000588972 TIMM17AQ99595 171 aa4.76□□□□□ -1.65
ATG4D-210ENST00000588972 CHAC1Q9BUX1 264 aa4.76□□□□□ -1.65
ATG4D-210ENST00000588972 A0A096LNJ9 63 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 GVQW2A0A096LPI5 108 aaPredicted RBP4.75□□□□□ -1.65
ATG4D-210ENST00000588972 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 A0A0J9YXV3 536 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 IGIPA6NJ69 53 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.75□□□□□ -1.65
ATG4D-210ENST00000588972 FABP4P15090 132 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 RPL18AQ02543 176 aaKnown RBP4.75□□□□□ -1.65
ATG4D-210ENST00000588972 PMCHL1Q16048 86 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 C5orf38Q86SI9 138 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 FAM19A2Q8N3H0 131 aa4.75□□□□□ -1.65
ATG4D-210ENST00000588972 IGHV1-58A0A0C4DH39 117 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 COX7A2LO14548 114 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 UBE2AP49459 152 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 UBE2D1P51668 147 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 CNBPP62633 177 aaKnown RBP4.74□□□□□ -1.65
ATG4D-210ENST00000588972 C9orf163Q8N9P6 203 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 IFI27L1Q96BM0 104 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 SCGB3A1Q96QR1 104 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 AMELXQ99217 191 aa4.74□□□□□ -1.65
ATG4D-210ENST00000588972 TRAV12-1A0A0B4J245 112 aa4.73□□□□□ -1.65
ATG4D-210ENST00000588972 C20orf202A1L168 122 aa4.73□□□□□ -1.65
ATG4D-210ENST00000588972 PANO1I0J062 215 aa4.73□□□□□ -1.65
ATG4D-210ENST00000588972 COX6A2Q02221 97 aa4.73□□□□□ -1.65
ATG4D-210ENST00000588972 TAL2Q16559 108 aa4.73□□□□□ -1.65
ATG4D-210ENST00000588972 C2orf88Q9BSF0 95 aa4.73□□□□□ -1.65
ATG4D-210ENST00000588972 IGLV4-69A0A075B6H9 119 aa4.72□□□□□ -1.65
ATG4D-210ENST00000588972 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.72□□□□□ -1.65
ATG4D-210ENST00000588972 SYS1-DBNDD2H3BUS1 97 aa4.72□□□□□ -1.65
ATG4D-210ENST00000588972 OR10D4PQ8NGN7 298 aa4.72□□□□□ -1.65
ATG4D-210ENST00000588972 ORAOV1Q8WV07 137 aa4.72□□□□□ -1.65
ATG4D-210ENST00000588972 C12orf57Q99622 126 aa4.72□□□□□ -1.65
ATG4D-210ENST00000588972 IGHV3-64A0A075B6Q5 118 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 C3orf79P0CE67 100 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 KRTDAPP60985 99 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 SEC11AP67812 179 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 SPAG11BQ08648 103 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 PMVKQ15126 192 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 LINC00469Q8N7U9 141 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 CIRBP-AS1Q8TBR5 109 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 CARD19Q96LW7 228 aa4.71□□□□□ -1.66
ATG4D-210ENST00000588972 APOMO95445 188 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 PLNP26678 52 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 SYCNQ0VAF6 134 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 JOSD1Q15040 202 aaPredicted RBP4.7□□□□□ -1.66
ATG4D-210ENST00000588972 LINC01545Q5VT33 79 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 SDIM1Q6ZPB5 146 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 Q6ZRU5 148 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 FAM19A3Q7Z5A8 133 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 PCP2Q8IVA1 136 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 CST9LQ9H4G1 147 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 CDKN2A-AS1Q9UH64 79 aa4.7□□□□□ -1.66
ATG4D-210ENST00000588972 IGKV2-24A0A0C4DH68 120 aa4.69□□□□□ -1.66
ATG4D-210ENST00000588972 F8VRH5 84 aa4.69□□□□□ -1.66
ATG4D-210ENST00000588972 RPL37AP61513 92 aaKnown RBP4.69□□□□□ -1.66
ATG4D-210ENST00000588972 HERVK_113P63121 156 aa4.69□□□□□ -1.66
ATG4D-210ENST00000588972 Q6ZVH6 145 aa4.69□□□□□ -1.66
ATG4D-210ENST00000588972 A0A096LNI7 61 aa4.68□□□□□ -1.66
ATG4D-210ENST00000588972 TINCRA0A1B0GVN0 87 aa4.68□□□□□ -1.66
ATG4D-210ENST00000588972 H0Y9J4 135 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms