RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ASB16-AS1Q495Z4 193 aa10.41□□□□□ -0.74
CCDC43-204ENST00000588687 ZNF625Q96I27 306 aaPredicted RBP10.41□□□□□ -0.74
CCDC43-204ENST00000588687 FA2HQ7L5A8 372 aa10.39□□□□□ -0.75
CCDC43-204ENST00000588687 URB1-AS1Q96HZ7 61 aa10.39□□□□□ -0.75
CCDC43-204ENST00000588687 C11orf86A6NJI1 115 aa10.37□□□□□ -0.75
CCDC43-204ENST00000588687 DAND5Q8N907 189 aa10.36□□□□□ -0.75
CCDC43-204ENST00000588687 Q8NBF4 154 aa10.36□□□□□ -0.75
CCDC43-204ENST00000588687 SMCO4Q9NRQ5 59 aa10.36□□□□□ -0.75
CCDC43-204ENST00000588687 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
CCDC43-204ENST00000588687 SPRR1AP35321 89 aa10.34□□□□□ -0.75
CCDC43-204ENST00000588687 SFTA2Q6UW10 78 aa10.34□□□□□ -0.75
CCDC43-204ENST00000588687 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
CCDC43-204ENST00000588687 NDUFA6P56556 154 aa10.33□□□□□ -0.76
CCDC43-204ENST00000588687 CLLU1Q5K131 121 aa10.33□□□□□ -0.76
CCDC43-204ENST00000588687 ZNF706Q9Y5V0 76 aaPredicted RBP10.33□□□□□ -0.76
CCDC43-204ENST00000588687 PRYO14603 147 aa10.31□□□□□ -0.76
CCDC43-204ENST00000588687 FABP9Q0Z7S8 132 aa10.31□□□□□ -0.76
CCDC43-204ENST00000588687 COX19Q49B96 90 aa10.31□□□□□ -0.76
CCDC43-204ENST00000588687 LINC00483Q53H64 154 aa10.31□□□□□ -0.76
CCDC43-204ENST00000588687 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
CCDC43-204ENST00000588687 SPINK1P00995 79 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 HBDP02042 147 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 S100PP25815 95 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 C4orf48Q5BLP8 95 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 UQCC3Q6UW78 93 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 C18orf32Q8TCD1 76 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 SMCR5Q8TEV8 140 aa10.3□□□□□ -0.76
CCDC43-204ENST00000588687 LINC01547P58512 204 aaPredicted RBP10.29□□□□□ -0.76
CCDC43-204ENST00000588687 LINC00158P58513 81 aa10.29□□□□□ -0.76
CCDC43-204ENST00000588687 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
CCDC43-204ENST00000588687 KCNQ1DNQ9H478 68 aa10.29□□□□□ -0.76
CCDC43-204ENST00000588687 A0A0U1RRA0 63 aa10.27□□□□□ -0.77
CCDC43-204ENST00000588687 LINC00614P0C842 121 aa10.27□□□□□ -0.77
CCDC43-204ENST00000588687 BAGE3Q86Y29 109 aa10.27□□□□□ -0.77
CCDC43-204ENST00000588687 SEC11CQ9BY50 192 aa10.27□□□□□ -0.77
CCDC43-204ENST00000588687 TMEM223A0PJW6 202 aa10.26□□□□□ -0.77
CCDC43-204ENST00000588687 SEC61BP60468 96 aaKnown RBP10.26□□□□□ -0.77
CCDC43-204ENST00000588687 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
CCDC43-204ENST00000588687 Q8N377 158 aa10.26□□□□□ -0.77
CCDC43-204ENST00000588687 NCR3O14931 201 aa10.25□□□□□ -0.77
CCDC43-204ENST00000588687 RPS29P62273 56 aaKnown RBP10.25□□□□□ -0.77
CCDC43-204ENST00000588687 SMIM13P0DJ93 91 aa10.24□□□□□ -0.77
CCDC43-204ENST00000588687 BOD1L2Q8IYS8 172 aa10.24□□□□□ -0.77
CCDC43-204ENST00000588687 XP32Q5T750 250 aa10.23□□□□□ -0.77
CCDC43-204ENST00000588687 CRCT1Q9UGL9 99 aa10.23□□□□□ -0.77
CCDC43-204ENST00000588687 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
CCDC43-204ENST00000588687 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
CCDC43-204ENST00000588687 MOBPQ13875 183 aa10.22□□□□□ -0.77
CCDC43-204ENST00000588687 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
CCDC43-204ENST00000588687 MIR7-3HGQ8N6C7 128 aa10.22□□□□□ -0.77
CCDC43-204ENST00000588687 CHTOPQ9Y3Y2 248 aaKnown RBP10.22□□□□□ -0.77
CCDC43-204ENST00000588687 ETDCA0A1B0GVM5 59 aa10.21□□□□□ -0.77
CCDC43-204ENST00000588687 C10orf91Q5T1B1 145 aa10.21□□□□□ -0.77
CCDC43-204ENST00000588687 B5MCH6 92 aa10.2□□□□□ -0.78
CCDC43-204ENST00000588687 IFITM2Q01629 132 aa10.19□□□□□ -0.78
CCDC43-204ENST00000588687 RHEBQ15382 184 aa10.19□□□□□ -0.78
CCDC43-204ENST00000588687 GAGE2AQ6NT46 116 aa10.19□□□□□ -0.78
CCDC43-204ENST00000588687 FAM19A2Q8N3H0 131 aa10.19□□□□□ -0.78
CCDC43-204ENST00000588687 Q9BRP9 147 aa10.19□□□□□ -0.78
CCDC43-204ENST00000588687 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
CCDC43-204ENST00000588687 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
CCDC43-204ENST00000588687 NDUFA12Q9UI09 145 aa10.18□□□□□ -0.78
CCDC43-204ENST00000588687 TRAPPC1Q9Y5R8 145 aa10.18□□□□□ -0.78
CCDC43-204ENST00000588687 MEIG1Q5JSS6 88 aa10.17□□□□□ -0.78
CCDC43-204ENST00000588687 SSBP3-AS1Q7Z2R9 100 aa10.17□□□□□ -0.78
CCDC43-204ENST00000588687 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
CCDC43-204ENST00000588687 SLC25A20O43772 301 aa10.15□□□□□ -0.78
CCDC43-204ENST00000588687 HERV-K104P63124 156 aa10.15□□□□□ -0.78
CCDC43-204ENST00000588687 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
CCDC43-204ENST00000588687 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
CCDC43-204ENST00000588687 ATP6V1G1O75348 118 aa10.13□□□□□ -0.79
CCDC43-204ENST00000588687 TSPEAR-AS2P59090 65 aa10.13□□□□□ -0.79
CCDC43-204ENST00000588687 Q6ZRX8 168 aa10.13□□□□□ -0.79
CCDC43-204ENST00000588687 IFI27L1Q96BM0 104 aa10.13□□□□□ -0.79
CCDC43-204ENST00000588687 LCE2BO14633 110 aa10.12□□□□□ -0.79
CCDC43-204ENST00000588687 TRBV10-2A0A0K0K1G8 114 aa10.11□□□□□ -0.79
CCDC43-204ENST00000588687 MT1HP80294 61 aa10.11□□□□□ -0.79
CCDC43-204ENST00000588687 COMMD7Q86VX2 200 aa10.11□□□□□ -0.79
CCDC43-204ENST00000588687 DDTP30046 118 aa10.1□□□□□ -0.79
CCDC43-204ENST00000588687 LINC00587B1AMM8 73 aa10.09□□□□□ -0.79
CCDC43-204ENST00000588687 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
CCDC43-204ENST00000588687 CHCHD1Q96BP2 118 aaKnown RBP10.08□□□□□ -0.8
CCDC43-204ENST00000588687 IGLV6-57P01721 117 aa10.07□□□□□ -0.8
CCDC43-204ENST00000588687 MAP1LC3CQ9BXW4 147 aa10.07□□□□□ -0.8
CCDC43-204ENST00000588687 S100A12P80511 92 aa10.06□□□□□ -0.8
CCDC43-204ENST00000588687 SPANXB1Q9NS25 103 aaPredicted RBP10.06□□□□□ -0.8
CCDC43-204ENST00000588687 YPEL4Q96NS1 127 aa10.05□□□□□ -0.8
CCDC43-204ENST00000588687 C9orf153Q5TBE3 101 aa10.03□□□□□ -0.8
CCDC43-204ENST00000588687 ST20-AS1Q8NBB2 130 aa10.03□□□□□ -0.8
CCDC43-204ENST00000588687 FLGP20930 4061 aaPredicted RBP10.02□□□□□ -0.8
CCDC43-204ENST00000588687 NDUFC2O95298 119 aa10.02□□□□□ -0.81
CCDC43-204ENST00000588687 TRAV23DV6A0A075B6W5 121 aa10.01□□□□□ -0.81
CCDC43-204ENST00000588687 LEPROTO15243 131 aa10.01□□□□□ -0.81
CCDC43-204ENST00000588687 EIF4EBP3O60516 100 aaPredicted RBP10.01□□□□□ -0.81
CCDC43-204ENST00000588687 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
CCDC43-204ENST00000588687 PCOTHQ58A44 107 aa10.01□□□□□ -0.81
CCDC43-204ENST00000588687 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
CCDC43-204ENST00000588687 J3QQQ9 107 aa9.98□□□□□ -0.81
CCDC43-204ENST00000588687 ZNF73O43830 326 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms