RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 HSPG2P98160 4391 aa5.69□□□□□ -1.5
CIRBP-218ENST00000588344 IGLV5-37A0A075B6J1 123 aa5.69□□□□□ -1.5
CIRBP-218ENST00000588344 SCGB1D4Q6XE38 83 aa5.69□□□□□ -1.5
CIRBP-218ENST00000588344 FAM19A5Q7Z5A7 132 aaPredicted RBP5.69□□□□□ -1.5
CIRBP-218ENST00000588344 MIR7-3HGQ8N6C7 128 aa5.69□□□□□ -1.5
CIRBP-218ENST00000588344 COPS9Q8WXC6 57 aa5.69□□□□□ -1.5
CIRBP-218ENST00000588344 MIEN1Q9BRT3 115 aa5.69□□□□□ -1.5
CIRBP-218ENST00000588344 C22orf24Q9Y442 160 aa5.69□□□□□ -1.5
CIRBP-218ENST00000588344 A0A0U1RRA0 63 aa5.68□□□□□ -1.5
CIRBP-218ENST00000588344 FAM168BA1KXE4 195 aa5.68□□□□□ -1.5
CIRBP-218ENST00000588344 M0QXV9 152 aa5.68□□□□□ -1.5
CIRBP-218ENST00000588344 RPL37AP61513 92 aaKnown RBP5.68□□□□□ -1.5
CIRBP-218ENST00000588344 Q6ZVH6 145 aa5.68□□□□□ -1.5
CIRBP-218ENST00000588344 NKAPP1Q8N9T2 125 aa5.68□□□□□ -1.5
CIRBP-218ENST00000588344 HERC2O95714 4834 aa5.67□□□□□ -1.5
CIRBP-218ENST00000588344 TMEM238C9JI98 176 aa5.67□□□□□ -1.5
CIRBP-218ENST00000588344 Q5VSD8 79 aa5.67□□□□□ -1.5
CIRBP-218ENST00000588344 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
CIRBP-218ENST00000588344 NDUFC2O95298 119 aa5.66□□□□□ -1.5
CIRBP-218ENST00000588344 UBE2BP63146 152 aa5.66□□□□□ -1.5
CIRBP-218ENST00000588344 SERTAD4-AS1Q5TG53 156 aa5.66□□□□□ -1.5
CIRBP-218ENST00000588344 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
CIRBP-218ENST00000588344 KRTAP7-1Q8IUC3 87 aa5.66□□□□□ -1.5
CIRBP-218ENST00000588344 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
CIRBP-218ENST00000588344 VAMP8Q9BV40 100 aa5.66□□□□□ -1.5
CIRBP-218ENST00000588344 PPDPFQ9H3Y8 114 aa5.66□□□□□ -1.5
CIRBP-218ENST00000588344 M0R378 163 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 DLEU1O43261 78 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 COX8AP10176 69 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 VPREB1P12018 145 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 IFITM1P13164 125 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 ADAMTSL4-AS1Q5T5F5 129 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 PCP2Q8IVA1 136 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 SPANXDQ9BXN6 97 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 SPANXCQ9NY87 97 aa5.65□□□□□ -1.5
CIRBP-218ENST00000588344 TRBV10-2A0A0K0K1G8 114 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 S100A12P80511 92 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 PYY3Q5JQD4 70 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 DAND5Q8N907 189 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 LINC00167Q96N53 147 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 LITAFQ99732 161 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 TTTY13Q9BZ97 58 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 CBY1Q9Y3M2 126 aa5.64□□□□□ -1.51
CIRBP-218ENST00000588344 PRR3P79522 188 aaKnown RBP5.63□□□□□ -1.51
CIRBP-218ENST00000588344 SPATA45Q537H7 98 aa5.63□□□□□ -1.51
CIRBP-218ENST00000588344 LINC00518Q8N0U6 118 aa5.63□□□□□ -1.51
CIRBP-218ENST00000588344 LINC00308Q8TCZ7 52 aa5.63□□□□□ -1.51
CIRBP-218ENST00000588344 SPANXB1Q9NS25 103 aaPredicted RBP5.63□□□□□ -1.51
CIRBP-218ENST00000588344 PSORS1C2Q9UIG4 136 aa5.63□□□□□ -1.51
CIRBP-218ENST00000588344 PAM16Q9Y3D7 125 aa5.63□□□□□ -1.51
CIRBP-218ENST00000588344 FAT1Q14517 4588 aa5.63□□□□□ -1.51
CIRBP-218ENST00000588344 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
CIRBP-218ENST00000588344 SRSF9Q13242 221 aaKnown RBP eCLIP5.62□□□□□ -1.51
CIRBP-218ENST00000588344 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
CIRBP-218ENST00000588344 KRTAP10-4P60372 401 aaPredicted RBP5.61□□□□□ -1.51
CIRBP-218ENST00000588344 C1orf137Q5JT78 98 aa5.61□□□□□ -1.51
CIRBP-218ENST00000588344 SLC25A34Q6PIV7 304 aa5.61□□□□□ -1.51
CIRBP-218ENST00000588344 GAGE10A6NGK3 116 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 BCE1O60756 84 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 INAFM2P0DMQ5 153 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 S100A7L2Q5SY68 101 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 SOSTDC1Q6X4U4 206 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 HIGD1BQ9P298 99 aa5.6□□□□□ -1.51
CIRBP-218ENST00000588344 SRRM2Q9UQ35 2752 aaKnown RBP5.59□□□□□ -1.51
CIRBP-218ENST00000588344 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 NPC2P61916 151 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 MUSTN1Q8IVN3 82 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 Q8NDZ9 215 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 C14orf144Q96I85 54 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 TMEM126AQ9H061 195 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 KCNQ1DNQ9H478 68 aa5.59□□□□□ -1.51
CIRBP-218ENST00000588344 IGKV2-28A0A075B6P5 120 aa5.58□□□□□ -1.52
CIRBP-218ENST00000588344 NCR3O14931 201 aa5.58□□□□□ -1.52
CIRBP-218ENST00000588344 IGKV2D-28P01615 120 aa5.58□□□□□ -1.52
CIRBP-218ENST00000588344 DDTP30046 118 aa5.58□□□□□ -1.52
CIRBP-218ENST00000588344 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
CIRBP-218ENST00000588344 REG3GQ6UW15 175 aa5.58□□□□□ -1.52
CIRBP-218ENST00000588344 HIST1H4GQ99525 98 aa5.58□□□□□ -1.52
CIRBP-218ENST00000588344 PRYO14603 147 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 ZNF861PO60384 105 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 EIF4EBP3O60516 100 aaPredicted RBP5.57□□□□□ -1.52
CIRBP-218ENST00000588344 IGLV6-57P01721 117 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 SMIM6P0DI80 62 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 TAL2Q16559 108 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 KRTAP11-1Q8IUC1 163 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 KRTAP4-5Q9BYR2 181 aa5.57□□□□□ -1.52
CIRBP-218ENST00000588344 TRAV13-2A0A0B4J235 113 aa5.56□□□□□ -1.52
CIRBP-218ENST00000588344 H0Y9J4 135 aa5.56□□□□□ -1.52
CIRBP-218ENST00000588344 HINT1P49773 126 aaPredicted RBP5.56□□□□□ -1.52
CIRBP-218ENST00000588344 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
CIRBP-218ENST00000588344 OR13C6PQ8NH95 151 aa5.56□□□□□ -1.52
CIRBP-218ENST00000588344 UQCR10Q9UDW1 63 aa5.56□□□□□ -1.52
CIRBP-218ENST00000588344 TRBV10-3A0A0K0K1G6 114 aa5.55□□□□□ -1.52
CIRBP-218ENST00000588344 SPRR1AP35321 89 aa5.55□□□□□ -1.52
CIRBP-218ENST00000588344 UBE2AP49459 152 aa5.55□□□□□ -1.52
CIRBP-218ENST00000588344 HNRNPA3P51991 378 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms