RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 UBE2AP49459 152 aa11.91□□□□□ -0.5
TRAPPC6A-203ENST00000587818 RPL24P83731 157 aaKnown RBP11.91□□□□□ -0.5
TRAPPC6A-203ENST00000587818 TMEM238C9JI98 176 aa11.9□□□□□ -0.5
TRAPPC6A-203ENST00000587818 LEPROTL1O95214 131 aa11.9□□□□□ -0.5
TRAPPC6A-203ENST00000587818 SMIM13P0DJ93 91 aa11.9□□□□□ -0.5
TRAPPC6A-203ENST00000587818 FABP4P15090 132 aa11.9□□□□□ -0.5
TRAPPC6A-203ENST00000587818 SFTA2Q6UW10 78 aa11.89□□□□□ -0.51
TRAPPC6A-203ENST00000587818 KRTAP13-1Q8IUC0 172 aa11.89□□□□□ -0.51
TRAPPC6A-203ENST00000587818 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6A-203ENST00000587818 A0A087X002 238 aa11.87□□□□□ -0.51
TRAPPC6A-203ENST00000587818 PRLHP81277 87 aa11.87□□□□□ -0.51
TRAPPC6A-203ENST00000587818 MEIG1Q5JSS6 88 aa11.87□□□□□ -0.51
TRAPPC6A-203ENST00000587818 ATP6V1G1O75348 118 aa11.86□□□□□ -0.51
TRAPPC6A-203ENST00000587818 FAM19A1Q7Z5A9 133 aa11.86□□□□□ -0.51
TRAPPC6A-203ENST00000587818 PMCHL2Q9BQD1 86 aa11.86□□□□□ -0.51
TRAPPC6A-203ENST00000587818 TMEM126AQ9H061 195 aa11.86□□□□□ -0.51
TRAPPC6A-203ENST00000587818 LPAP08519 4548 aa11.85□□□□□ -0.51
TRAPPC6A-203ENST00000587818 M0R378 163 aa11.84□□□□□ -0.51
TRAPPC6A-203ENST00000587818 TSPAN13O95857 204 aa11.84□□□□□ -0.51
TRAPPC6A-203ENST00000587818 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
TRAPPC6A-203ENST00000587818 RNF213Q63HN8 5207 aa11.83□□□□□ -0.52
TRAPPC6A-203ENST00000587818 TSPEAR-AS2P59090 65 aa11.83□□□□□ -0.52
TRAPPC6A-203ENST00000587818 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
TRAPPC6A-203ENST00000587818 CRYGAP11844 174 aa11.82□□□□□ -0.52
TRAPPC6A-203ENST00000587818 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
TRAPPC6A-203ENST00000587818 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
TRAPPC6A-203ENST00000587818 HERV-K104P63124 156 aa11.81□□□□□ -0.52
TRAPPC6A-203ENST00000587818 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
TRAPPC6A-203ENST00000587818 TYMSOSQ8TAI1 123 aa11.81□□□□□ -0.52
TRAPPC6A-203ENST00000587818 LEPROTO15243 131 aa11.8□□□□□ -0.52
TRAPPC6A-203ENST00000587818 NCR3O14931 201 aa11.79□□□□□ -0.52
TRAPPC6A-203ENST00000587818 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
TRAPPC6A-203ENST00000587818 DPM2O94777 84 aa11.78□□□□□ -0.52
TRAPPC6A-203ENST00000587818 PRR4Q16378 134 aa11.78□□□□□ -0.52
TRAPPC6A-203ENST00000587818 DAND5Q8N907 189 aa11.78□□□□□ -0.52
TRAPPC6A-203ENST00000587818 IGKCP01834 107 aa11.77□□□□□ -0.53
TRAPPC6A-203ENST00000587818 PLNP26678 52 aa11.77□□□□□ -0.53
TRAPPC6A-203ENST00000587818 PLEKHB2Q96CS7 222 aa11.77□□□□□ -0.53
TRAPPC6A-203ENST00000587818 J3QQQ9 107 aa11.76□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIGD2AQ9BW72 106 aa11.75□□□□□ -0.53
TRAPPC6A-203ENST00000587818 MAP1LC3CQ9BXW4 147 aa11.75□□□□□ -0.53
TRAPPC6A-203ENST00000587818 LINC00587B1AMM8 73 aa11.74□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HERVK_113P61574 105 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
TRAPPC6A-203ENST00000587818 FAM229BQ4G0N7 80 aa11.72□□□□□ -0.53
TRAPPC6A-203ENST00000587818 LGALS3P17931 250 aaKnown RBP11.71□□□□□ -0.53
TRAPPC6A-203ENST00000587818 IGKV2D-26A0A0A0MRZ7 120 aa11.7□□□□□ -0.54
TRAPPC6A-203ENST00000587818 TRBV10-3A0A0K0K1G6 114 aa11.7□□□□□ -0.54
TRAPPC6A-203ENST00000587818 PRYO14603 147 aa11.69□□□□□ -0.54
TRAPPC6A-203ENST00000587818 C3orf22Q8N5N4 141 aa11.68□□□□□ -0.54
TRAPPC6A-203ENST00000587818 KCNQ1DNQ9H478 68 aa11.68□□□□□ -0.54
TRAPPC6A-203ENST00000587818 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
TRAPPC6A-203ENST00000587818 LOC107984156A0A0G2JMH3 177 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 SPRR1AP35321 89 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 NMUP48645 174 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 NPC2P61916 151 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 ADAMTSL4-AS1Q5T5F5 129 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 ARL17AQ8IVW1 177 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 LINC00304Q8N9R0 145 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 SMCR5Q8TEV8 140 aa11.66□□□□□ -0.54
TRAPPC6A-203ENST00000587818 ETDCA0A1B0GVM5 59 aa11.65□□□□□ -0.54
TRAPPC6A-203ENST00000587818 SPRR4Q96PI1 79 aa11.65□□□□□ -0.54
TRAPPC6A-203ENST00000587818 A0A0J9YXY3 114 aa11.64□□□□□ -0.55
TRAPPC6A-203ENST00000587818 E9PLD3 99 aa11.64□□□□□ -0.55
TRAPPC6A-203ENST00000587818 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC6A-203ENST00000587818 EIF4EBP3O60516 100 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC6A-203ENST00000587818 LINC00337Q8N6G1 96 aa11.64□□□□□ -0.55
TRAPPC6A-203ENST00000587818 SOSTDC1Q6X4U4 206 aa11.63□□□□□ -0.55
TRAPPC6A-203ENST00000587818 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
TRAPPC6A-203ENST00000587818 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
TRAPPC6A-203ENST00000587818 DDTP30046 118 aa11.62□□□□□ -0.55
TRAPPC6A-203ENST00000587818 MIEN1Q9BRT3 115 aa11.61□□□□□ -0.55
TRAPPC6A-203ENST00000587818 TRBV10-2A0A0K0K1G8 114 aa11.6□□□□□ -0.55
TRAPPC6A-203ENST00000587818 LINC01545Q5VT33 79 aa11.6□□□□□ -0.55
TRAPPC6A-203ENST00000587818 B5MCH6 92 aa11.59□□□□□ -0.55
TRAPPC6A-203ENST00000587818 C3orf79P0CE67 100 aa11.59□□□□□ -0.55
TRAPPC6A-203ENST00000587818 PET117Q6UWS5 81 aa11.59□□□□□ -0.55
TRAPPC6A-203ENST00000587818 ERC2-IT1O76042 136 aa11.58□□□□□ -0.56
TRAPPC6A-203ENST00000587818 S100A12P80511 92 aa11.58□□□□□ -0.56
TRAPPC6A-203ENST00000587818 S100A7L2Q5SY68 101 aa11.58□□□□□ -0.56
TRAPPC6A-203ENST00000587818 SPANXB1Q9NS25 103 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC6A-203ENST00000587818 ZNF706Q9Y5V0 76 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC6A-203ENST00000587818 NDUFC2O95298 119 aa11.57□□□□□ -0.56
TRAPPC6A-203ENST00000587818 TTTY13Q9BZ97 58 aa11.57□□□□□ -0.56
TRAPPC6A-203ENST00000587818 IGLV6-57P01721 117 aa11.55□□□□□ -0.56
TRAPPC6A-203ENST00000587818 KRTDAPP60985 99 aa11.55□□□□□ -0.56
TRAPPC6A-203ENST00000587818 GAGE2AQ6NT46 116 aa11.55□□□□□ -0.56
TRAPPC6A-203ENST00000587818 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
TRAPPC6A-203ENST00000587818 LITAFQ99732 161 aa11.54□□□□□ -0.56
TRAPPC6A-203ENST00000587818 Q9BRP9 147 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms