RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 XAGE1AQ9HD64 81 aa9.73□□□□□ -0.85
NCLN-203ENST00000587740 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
NCLN-203ENST00000587740 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
NCLN-203ENST00000587740 J3QQQ9 107 aa9.72□□□□□ -0.85
NCLN-203ENST00000587740 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
NCLN-203ENST00000587740 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
NCLN-203ENST00000587740 E9PLD3 99 aa9.71□□□□□ -0.86
NCLN-203ENST00000587740 AKR1D1P51857 326 aa9.71□□□□□ -0.86
NCLN-203ENST00000587740 TSPEAR-AS2P59090 65 aa9.71□□□□□ -0.86
NCLN-203ENST00000587740 C5orf52A6NGY3 159 aa9.7□□□□□ -0.86
NCLN-203ENST00000587740 NMUP48645 174 aa9.7□□□□□ -0.86
NCLN-203ENST00000587740 LINC00158P58513 81 aa9.7□□□□□ -0.86
NCLN-203ENST00000587740 MEIG1Q5JSS6 88 aa9.7□□□□□ -0.86
NCLN-203ENST00000587740 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
NCLN-203ENST00000587740 LPAP08519 4548 aa9.7□□□□□ -0.86
NCLN-203ENST00000587740 LINC00587B1AMM8 73 aa9.69□□□□□ -0.86
NCLN-203ENST00000587740 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
NCLN-203ENST00000587740 A0A0U1RRA0 63 aa9.68□□□□□ -0.86
NCLN-203ENST00000587740 M0QXV9 152 aa9.68□□□□□ -0.86
NCLN-203ENST00000587740 SMIM13P0DJ93 91 aa9.67□□□□□ -0.86
NCLN-203ENST00000587740 KRTAP7-1Q8IUC3 87 aa9.67□□□□□ -0.86
NCLN-203ENST00000587740 SND1-IT1Q9HBX3 110 aa9.67□□□□□ -0.86
NCLN-203ENST00000587740 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
NCLN-203ENST00000587740 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
NCLN-203ENST00000587740 UBE2BP63146 152 aa9.64□□□□□ -0.87
NCLN-203ENST00000587740 LBHQ53QV2 105 aaPredicted RBP9.64□□□□□ -0.87
NCLN-203ENST00000587740 NKAPP1Q8N9T2 125 aa9.63□□□□□ -0.87
NCLN-203ENST00000587740 TP73-AS1Q9UF72 201 aa9.63□□□□□ -0.87
NCLN-203ENST00000587740 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
NCLN-203ENST00000587740 RPL24P83731 157 aaKnown RBP9.62□□□□□ -0.87
NCLN-203ENST00000587740 SRSF9Q13242 221 aaKnown RBP eCLIP9.62□□□□□ -0.87
NCLN-203ENST00000587740 SPINK6Q6UWN8 80 aa9.62□□□□□ -0.87
NCLN-203ENST00000587740 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
NCLN-203ENST00000587740 MIR7-3HGQ8N6C7 128 aa9.62□□□□□ -0.87
NCLN-203ENST00000587740 IGLV5-37A0A075B6J1 123 aa9.61□□□□□ -0.87
NCLN-203ENST00000587740 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
NCLN-203ENST00000587740 A0A0J9YXY3 114 aa9.6□□□□□ -0.87
NCLN-203ENST00000587740 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
NCLN-203ENST00000587740 SCGB1D1O95968 90 aa9.6□□□□□ -0.87
NCLN-203ENST00000587740 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
NCLN-203ENST00000587740 HSBP1L1C9JCN9 74 aa9.59□□□□□ -0.87
NCLN-203ENST00000587740 VPREB1P12018 145 aa9.59□□□□□ -0.87
NCLN-203ENST00000587740 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
NCLN-203ENST00000587740 REG3GQ6UW15 175 aa9.59□□□□□ -0.87
NCLN-203ENST00000587740 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
NCLN-203ENST00000587740 DAND5Q8N907 189 aa9.58□□□□□ -0.88
NCLN-203ENST00000587740 LINC00167Q96N53 147 aa9.58□□□□□ -0.88
NCLN-203ENST00000587740 TTTY13Q9BZ97 58 aa9.58□□□□□ -0.88
NCLN-203ENST00000587740 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
NCLN-203ENST00000587740 KRTAP11-1Q8IUC1 163 aa9.57□□□□□ -0.88
NCLN-203ENST00000587740 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
NCLN-203ENST00000587740 MIEN1Q9BRT3 115 aa9.56□□□□□ -0.88
NCLN-203ENST00000587740 RPL37AP8A6NKH3 93 aa9.55□□□□□ -0.88
NCLN-203ENST00000587740 TIMM17BO60830 172 aa9.55□□□□□ -0.88
NCLN-203ENST00000587740 SCGB1D4Q6XE38 83 aa9.55□□□□□ -0.88
NCLN-203ENST00000587740 Q8NDZ9 215 aa9.55□□□□□ -0.88
NCLN-203ENST00000587740 KRTAP9-2Q9BYQ4 174 aa9.55□□□□□ -0.88
NCLN-203ENST00000587740 MUC2Q02817 5179 aa9.54□□□□□ -0.88
NCLN-203ENST00000587740 LOC107984156A0A0G2JMH3 177 aa9.54□□□□□ -0.88
NCLN-203ENST00000587740 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
NCLN-203ENST00000587740 ARL17AQ8IVW1 177 aa9.54□□□□□ -0.88
NCLN-203ENST00000587740 M0R378 163 aa9.53□□□□□ -0.88
NCLN-203ENST00000587740 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
NCLN-203ENST00000587740 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.89
NCLN-203ENST00000587740 IGKV2D-28P01615 120 aa9.52□□□□□ -0.89
NCLN-203ENST00000587740 IGLV7-43P04211 117 aa9.52□□□□□ -0.89
NCLN-203ENST00000587740 NPC2P61916 151 aa9.52□□□□□ -0.89
NCLN-203ENST00000587740 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
NCLN-203ENST00000587740 NCR3O14931 201 aa9.51□□□□□ -0.89
NCLN-203ENST00000587740 LITAFQ99732 161 aa9.51□□□□□ -0.89
NCLN-203ENST00000587740 TMEM238C9JI98 176 aa9.49□□□□□ -0.89
NCLN-203ENST00000587740 JOSD1Q15040 202 aaPredicted RBP9.49□□□□□ -0.89
NCLN-203ENST00000587740 BCE1O60756 84 aa9.48□□□□□ -0.89
NCLN-203ENST00000587740 NDUFC2O95298 119 aa9.48□□□□□ -0.89
NCLN-203ENST00000587740 SOSTDC1Q6X4U4 206 aa9.48□□□□□ -0.89
NCLN-203ENST00000587740 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
NCLN-203ENST00000587740 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
NCLN-203ENST00000587740 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
NCLN-203ENST00000587740 SPANXCQ9NY87 97 aa9.47□□□□□ -0.89
NCLN-203ENST00000587740 TRBV10-2A0A0K0K1G8 114 aa9.46□□□□□ -0.9
NCLN-203ENST00000587740 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
NCLN-203ENST00000587740 COPS9Q8WXC6 57 aa9.46□□□□□ -0.9
NCLN-203ENST00000587740 DIRC1Q969H9 104 aa9.46□□□□□ -0.9
NCLN-203ENST00000587740 ZNF861PO60384 105 aa9.45□□□□□ -0.9
NCLN-203ENST00000587740 Q6ZVH6 145 aa9.45□□□□□ -0.9
NCLN-203ENST00000587740 TRBV10-3A0A0K0K1G6 114 aa9.44□□□□□ -0.9
NCLN-203ENST00000587740 RPL28P46779 137 aaKnown RBP9.44□□□□□ -0.9
NCLN-203ENST00000587740 S100A12P80511 92 aa9.44□□□□□ -0.9
NCLN-203ENST00000587740 VAMP8Q9BV40 100 aa9.44□□□□□ -0.9
NCLN-203ENST00000587740 TMEM126AQ9H061 195 aa9.44□□□□□ -0.9
NCLN-203ENST00000587740 PRYO14603 147 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 COX8AP10176 69 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 IFITM1P13164 125 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 DDTP30046 118 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 UBE2AP49459 152 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 SPATA45Q537H7 98 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 PAM16Q9Y3D7 125 aa9.43□□□□□ -0.9
NCLN-203ENST00000587740 H0Y9J4 135 aa9.42□□□□□ -0.9
NCLN-203ENST00000587740 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms