RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SPAG11BQ08648 103 aa12.67□□□□□ -0.38
DDX39A-206ENST00000587730 C6orf99Q4VX62 202 aa12.67□□□□□ -0.38
DDX39A-206ENST00000587730 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
DDX39A-206ENST00000587730 UBL5Q9BZL1 73 aa12.67□□□□□ -0.38
DDX39A-206ENST00000587730 ZNF561-AS1K7EIQ3 104 aa12.67□□□□□ -0.38
DDX39A-206ENST00000587730 KRTAP10-3P60369 221 aa12.67□□□□□ -0.38
DDX39A-206ENST00000587730 USP17L23D6RBM5 183 aa12.66□□□□□ -0.38
DDX39A-206ENST00000587730 PDE6GP18545 87 aa12.66□□□□□ -0.38
DDX39A-206ENST00000587730 hADV29S1A0JD25 119 aa12.65□□□□□ -0.38
DDX39A-206ENST00000587730 SPART-AS1P0CW21 52 aa12.65□□□□□ -0.38
DDX39A-206ENST00000587730 PRR3P79522 188 aaKnown RBP12.65□□□□□ -0.38
DDX39A-206ENST00000587730 IGLV10-54A0A075B6I4 117 aa12.65□□□□□ -0.39
DDX39A-206ENST00000587730 LOC110117498A0A087WWA1 95 aa12.65□□□□□ -0.39
DDX39A-206ENST00000587730 PRR34Q9NV39 138 aa12.65□□□□□ -0.39
DDX39A-206ENST00000587730 DEFB135Q30KP9 77 aa12.64□□□□□ -0.39
DDX39A-206ENST00000587730 JMJD1CQ15652 2540 aa12.64□□□□□ -0.39
DDX39A-206ENST00000587730 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
DDX39A-206ENST00000587730 RBM3P98179 157 aaKnown RBP12.62□□□□□ -0.39
DDX39A-206ENST00000587730 BCE1O60756 84 aa12.61□□□□□ -0.39
DDX39A-206ENST00000587730 TMEM258P61165 79 aa12.61□□□□□ -0.39
DDX39A-206ENST00000587730 RPS28P62857 69 aaKnown RBP12.61□□□□□ -0.39
DDX39A-206ENST00000587730 C9orf116Q5BN46 136 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-206ENST00000587730 C6orf223Q8N319 242 aa12.61□□□□□ -0.39
DDX39A-206ENST00000587730 C3orf56Q8N813 242 aa12.61□□□□□ -0.39
DDX39A-206ENST00000587730 Q8NAQ8 132 aa12.61□□□□□ -0.39
DDX39A-206ENST00000587730 J3KT08 172 aa12.6□□□□□ -0.39
DDX39A-206ENST00000587730 UNQ6190/PRO20217Q6UXQ8 127 aa12.59□□□□□ -0.39
DDX39A-206ENST00000587730 Q6ZQT0 140 aa12.58□□□□□ -0.4
DDX39A-206ENST00000587730 TRBV7-6A0A0J9YX20 115 aa12.58□□□□□ -0.4
DDX39A-206ENST00000587730 A0A087WVE0 104 aa12.57□□□□□ -0.4
DDX39A-206ENST00000587730 LAMTOR3Q9UHA4 124 aa12.56□□□□□ -0.4
DDX39A-206ENST00000587730 DEFB4AO15263 64 aa12.55□□□□□ -0.4
DDX39A-206ENST00000587730 C10orf25Q5T742 122 aa12.55□□□□□ -0.4
DDX39A-206ENST00000587730 Q8NDZ9 215 aa12.55□□□□□ -0.4
DDX39A-206ENST00000587730 DIRC1Q969H9 104 aa12.55□□□□□ -0.4
DDX39A-206ENST00000587730 DSCR8Q96T75 97 aa12.55□□□□□ -0.4
DDX39A-206ENST00000587730 UPK3BQ9BT76 320 aa12.55□□□□□ -0.4
DDX39A-206ENST00000587730 Q8N3U1 123 aa12.55□□□□□ -0.4
DDX39A-206ENST00000587730 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-206ENST00000587730 CELA1Q9UNI1 258 aa12.54□□□□□ -0.4
DDX39A-206ENST00000587730 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
DDX39A-206ENST00000587730 KLK12Q9UKR0 248 aa12.53□□□□□ -0.4
DDX39A-206ENST00000587730 H3BNG1 76 aa12.53□□□□□ -0.4
DDX39A-206ENST00000587730 NDUFC2-KCTD14E9PQ53 114 aa12.52□□□□□ -0.41
DDX39A-206ENST00000587730 ENHOQ6UWT2 76 aa12.51□□□□□ -0.41
DDX39A-206ENST00000587730 WIPF1O43516 503 aa12.51□□□□□ -0.41
DDX39A-206ENST00000587730 F8WDY8 70 aa12.5□□□□□ -0.41
DDX39A-206ENST00000587730 HTN3P15516 51 aa12.5□□□□□ -0.41
DDX39A-206ENST00000587730 CXCL6P80162 114 aa12.49□□□□□ -0.41
DDX39A-206ENST00000587730 Q6ZQY7 126 aa12.49□□□□□ -0.41
DDX39A-206ENST00000587730 C6orf48Q9UBA6 75 aa12.49□□□□□ -0.41
DDX39A-206ENST00000587730 COX7BP24311 80 aa12.48□□□□□ -0.41
DDX39A-206ENST00000587730 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
DDX39A-206ENST00000587730 DNHD1Q96M86 4753 aa12.48□□□□□ -0.41
DDX39A-206ENST00000587730 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-206ENST00000587730 EGFEM1PQ0D2K5 195 aa12.48□□□□□ -0.41
DDX39A-206ENST00000587730 ELOF1P60002 83 aaKnown RBP12.46□□□□□ -0.41
DDX39A-206ENST00000587730 WFDC9Q8NEX5 89 aa12.46□□□□□ -0.41
DDX39A-206ENST00000587730 ATRQ13535 2644 aa12.46□□□□□ -0.42
DDX39A-206ENST00000587730 M0R378 163 aa12.45□□□□□ -0.42
DDX39A-206ENST00000587730 FAM19A1Q7Z5A9 133 aa12.45□□□□□ -0.42
DDX39A-206ENST00000587730 MDFIQ99750 246 aa12.45□□□□□ -0.42
DDX39A-206ENST00000587730 COL6A5A8TX70 2615 aa12.44□□□□□ -0.42
DDX39A-206ENST00000587730 LINC01547P58512 204 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-206ENST00000587730 Q6ZVQ6 151 aa12.44□□□□□ -0.42
DDX39A-206ENST00000587730 CAMK2N2Q96S95 79 aa12.44□□□□□ -0.42
DDX39A-206ENST00000587730 TRAV7A0A075B6U4 112 aa12.43□□□□□ -0.42
DDX39A-206ENST00000587730 TRBV7-4A0A0J9YYF1 115 aa12.43□□□□□ -0.42
DDX39A-206ENST00000587730 SPATA3Q8NHX4 192 aa12.42□□□□□ -0.42
DDX39A-206ENST00000587730 LOC107984640A0A0U1RRK4 108 aa12.41□□□□□ -0.42
DDX39A-206ENST00000587730 VPREB1P12018 145 aa12.41□□□□□ -0.42
DDX39A-206ENST00000587730 FBN1P35555 2871 aaKnown RBP12.41□□□□□ -0.42
DDX39A-206ENST00000587730 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
DDX39A-206ENST00000587730 XAGE1AQ9HD64 81 aa12.4□□□□□ -0.42
DDX39A-206ENST00000587730 HAMPP81172 84 aa12.39□□□□□ -0.43
DDX39A-206ENST00000587730 CYSTM1Q9H1C7 97 aa12.39□□□□□ -0.43
DDX39A-206ENST00000587730 STAB1Q9NY15 2570 aa12.38□□□□□ -0.43
DDX39A-206ENST00000587730 FBN3Q75N90 2809 aa12.38□□□□□ -0.43
DDX39A-206ENST00000587730 KPRPQ5T749 579 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-206ENST00000587730 KRTAP26-1Q6PEX3 210 aa12.36□□□□□ -0.43
DDX39A-206ENST00000587730 TENM1Q9UKZ4 2725 aa12.36□□□□□ -0.43
DDX39A-206ENST00000587730 FAM19A5Q7Z5A7 132 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-206ENST00000587730 LINC00528Q8N1L1 170 aa12.34□□□□□ -0.43
DDX39A-206ENST00000587730 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
DDX39A-206ENST00000587730 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
DDX39A-206ENST00000587730 C1orf43Q9BWL3 253 aa12.33□□□□□ -0.44
DDX39A-206ENST00000587730 KRTAP24-1Q3LI83 254 aa12.32□□□□□ -0.44
DDX39A-206ENST00000587730 Q6ZRU5 148 aa12.32□□□□□ -0.44
DDX39A-206ENST00000587730 C20orf197Q8N268 126 aa12.32□□□□□ -0.44
DDX39A-206ENST00000587730 C15orf56Q8N910 161 aa12.31□□□□□ -0.44
DDX39A-206ENST00000587730 M0R2N4 97 aa12.3□□□□□ -0.44
DDX39A-206ENST00000587730 KLKP1Q107X0 134 aa12.3□□□□□ -0.44
DDX39A-206ENST00000587730 LINC01556Q5JQF7 62 aa12.3□□□□□ -0.44
DDX39A-206ENST00000587730 A0A1B0GW54 56 aa12.28□□□□□ -0.44
DDX39A-206ENST00000587730 NDUFC1O43677 76 aa12.28□□□□□ -0.44
DDX39A-206ENST00000587730 FAM236DA0A1B0GTK5 79 aa12.27□□□□□ -0.45
DDX39A-206ENST00000587730 FAM236CP0DP71 79 aa12.27□□□□□ -0.45
DDX39A-206ENST00000587730 NBEAL2Q6ZNJ1 2754 aa12.26□□□□□ -0.45
DDX39A-206ENST00000587730 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
DDX39A-206ENST00000587730 KCNQ1DNQ9H478 68 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms