RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 IFI6P09912 130 aa0.47□□□□□ -2.33
TUBD1-207ENST00000587476 Q5VSD8 79 aa0.47□□□□□ -2.33
TUBD1-207ENST00000587476 WFDC9Q8NEX5 89 aa0.47□□□□□ -2.33
TUBD1-207ENST00000587476 GAFA1Q96PS6 74 aa0.47□□□□□ -2.33
TUBD1-207ENST00000587476 TULP4Q9NRJ4 1543 aa0.47□□□□□ -2.33
TUBD1-207ENST00000587476 CFAP74Q9C0B2 1584 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 NDUFB1O75438 58 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 COX8AP10176 69 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 DEFB123Q8N688 67 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 S100ZQ8WXG8 99 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 GNG13Q9P2W3 67 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 PIEZO1Q92508 2521 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 LRRC9Q6ZRR7 1453 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 ANKRD36A6QL64 1941 aa0.46□□□□□ -2.34
TUBD1-207ENST00000587476 PPRC1Q5VV67 1664 aaKnown RBP0.46□□□□□ -2.34
TUBD1-207ENST00000587476 ABCA8O94911 1581 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 ADAMTS12P58397 1594 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 SAMD9Q5K651 1589 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 URB2Q14146 1524 aaKnown RBP0.45□□□□□ -2.34
TUBD1-207ENST00000587476 KNDC1Q76NI1 1749 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 A0A087WWC5 75 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 COX7BP24311 80 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 NREPQ16612 68 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 NKTRP30414 1462 aaKnown RBP0.45□□□□□ -2.34
TUBD1-207ENST00000587476 DNAJC13O75165 2243 aa0.45□□□□□ -2.34
TUBD1-207ENST00000587476 SUPT6HQ7KZ85 1726 aaKnown RBP0.44□□□□□ -2.34
TUBD1-207ENST00000587476 SLIT1O75093 1534 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 MAGI3Q5TCQ9 1506 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 TSC2P49815 1807 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 SPTY2D1-AS1A0A0U1RR47 76 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 HMGA1P17096 107 aaKnown RBP0.44□□□□□ -2.34
TUBD1-207ENST00000587476 ATXN8Q156A1 80 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 DEFB109BQ30KR1 87 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 CRIPTQ9P021 101 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 HFM1A2PYH4 1435 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 PPLO60437 1756 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 RGPD4Q7Z3J3 1758 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 PKDREJQ9NTG1 2253 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 MYH4Q9Y623 1939 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 SETBP1Q9Y6X0 1596 aa0.44□□□□□ -2.34
TUBD1-207ENST00000587476 LRRC7Q96NW7 1537 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 CD163L1Q9NR16 1453 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 TMEM131LA2VDJ0 1609 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 USP32Q8NFA0 1604 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 PTPN23Q9H3S7 1636 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 RGPD3A6NKT7 1758 aaPredicted RBP0.43□□□□□ -2.34
TUBD1-207ENST00000587476 PAPPA2Q9BXP8 1791 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 SFTA3P0C7M3 94 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 C3orf79P0CE67 100 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 COX6B1P14854 86 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 CEP170BQ9Y4F5 1589 aaPredicted RBP0.43□□□□□ -2.34
TUBD1-207ENST00000587476 EFCAB5A4FU69 1503 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 ASXL1Q8IXJ9 1541 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 SHPRHQ149N8 1683 aa0.43□□□□□ -2.34
TUBD1-207ENST00000587476 IQGAP3Q86VI3 1631 aa0.42□□□□□ -2.34
TUBD1-207ENST00000587476 MADDQ8WXG6 1647 aa0.42□□□□□ -2.34
TUBD1-207ENST00000587476 UBR1Q8IWV7 1749 aa0.42□□□□□ -2.34
TUBD1-207ENST00000587476 LCE6AA0A183 80 aa0.42□□□□□ -2.34
TUBD1-207ENST00000587476 I3L3M4 83 aa0.42□□□□□ -2.34
TUBD1-207ENST00000587476 NDUFA4O00483 81 aa0.42□□□□□ -2.34
TUBD1-207ENST00000587476 RPL38P63173 70 aaKnown RBP0.42□□□□□ -2.34
TUBD1-207ENST00000587476 ENHOQ6UWT2 76 aa0.42□□□□□ -2.34
TUBD1-207ENST00000587476 TARBP1Q13395 1621 aaKnown RBP0.42□□□□□ -2.34
TUBD1-207ENST00000587476 ZFHX3Q15911 3703 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 ZFYVE26Q68DK2 2539 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 LRRIQ1Q96JM4 1722 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 DIP2AQ14689 1571 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 ANKRD50Q9ULJ7 1429 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 PTPRQQ9UMZ3 2332 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 CPSF4LA6NMK7 179 aaKnown RBP0.41□□□□□ -2.34
TUBD1-207ENST00000587476 K7EQZ3 153 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 SPRR1AP35321 89 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 SMIM5Q71RC9 77 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 USMG5Q96IX5 58 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 LMTK2Q8IWU2 1503 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 MROH1Q8NDA8 1641 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 MYO5CQ9NQX4 1742 aa0.41□□□□□ -2.34
TUBD1-207ENST00000587476 CDC42BPGQ6DT37 1551 aa0.4□□□□□ -2.34
TUBD1-207ENST00000587476 C5P01031 1676 aa0.4□□□□□ -2.34
TUBD1-207ENST00000587476 ZC3H13Q5T200 1668 aaKnown RBP0.4□□□□□ -2.34
TUBD1-207ENST00000587476 PIK3C2BO00750 1634 aa0.4□□□□□ -2.35
TUBD1-207ENST00000587476 ALKQ9UM73 1620 aa0.4□□□□□ -2.35
TUBD1-207ENST00000587476 LINC01549A6NIU2 74 aa0.4□□□□□ -2.35
TUBD1-207ENST00000587476 MRPL34Q9BQ48 92 aaKnown RBP0.4□□□□□ -2.35
TUBD1-207ENST00000587476 INO80Q9ULG1 1556 aaPredicted RBP0.4□□□□□ -2.35
TUBD1-207ENST00000587476 ANKRD17O75179 2603 aaKnown RBP0.39□□□□□ -2.35
TUBD1-207ENST00000587476 KIAA0556O60303 1618 aa0.39□□□□□ -2.35
TUBD1-207ENST00000587476 CRYBG1Q9Y4K1 1723 aa0.39□□□□□ -2.35
TUBD1-207ENST00000587476 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
TUBD1-207ENST00000587476 APLNQ9ULZ1 77 aa0.39□□□□□ -2.35
TUBD1-207ENST00000587476 AKAP6Q13023 2319 aa0.39□□□□□ -2.35
TUBD1-207ENST00000587476 RALGAPBQ86X10 1494 aa0.39□□□□□ -2.35
TUBD1-207ENST00000587476 ZNF831Q5JPB2 1677 aa0.39□□□□□ -2.35
TUBD1-207ENST00000587476 CCL22O00626 93 aa0.38□□□□□ -2.35
TUBD1-207ENST00000587476 SPRR1BP22528 89 aa0.38□□□□□ -2.35
TUBD1-207ENST00000587476 FCER1GP30273 86 aa0.38□□□□□ -2.35
TUBD1-207ENST00000587476 FXYD6Q9H0Q3 95 aa0.38□□□□□ -2.35
TUBD1-207ENST00000587476 OTOGQ6ZRI0 2925 aa0.38□□□□□ -2.35
TUBD1-207ENST00000587476 RGPD1P0DJD0 1748 aa0.38□□□□□ -2.35
TUBD1-207ENST00000587476 ABCA9Q8IUA7 1624 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms