RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NBDYA0A0U1RRE5 68 aa13.04□□□□□ -0.32
TRIM47-204ENST00000587339 NDUFC2O95298 119 aa13.04□□□□□ -0.32
TRIM47-204ENST00000587339 COX6CP09669 75 aa13.04□□□□□ -0.32
TRIM47-204ENST00000587339 LECT2O14960 151 aa13.03□□□□□ -0.32
TRIM47-204ENST00000587339 PSCAO43653 123 aa13.03□□□□□ -0.32
TRIM47-204ENST00000587339 TCL1BO95988 128 aa13.02□□□□□ -0.32
TRIM47-204ENST00000587339 NDUFC2-KCTD14E9PQ53 114 aa13.01□□□□□ -0.33
TRIM47-204ENST00000587339 CARD19Q96LW7 228 aa13.01□□□□□ -0.33
TRIM47-204ENST00000587339 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
TRIM47-204ENST00000587339 OR13C6PQ8NH95 151 aa13.01□□□□□ -0.33
TRIM47-204ENST00000587339 XAGE1AQ9HD64 81 aa13.01□□□□□ -0.33
TRIM47-204ENST00000587339 SLPIP03973 132 aa13□□□□□ -0.33
TRIM47-204ENST00000587339 Q8NDZ9 215 aa12.99□□□□□ -0.33
TRIM47-204ENST00000587339 Q6ZRP5 223 aa12.97□□□□□ -0.33
TRIM47-204ENST00000587339 WWC2-AS2Q96NR7 200 aa12.97□□□□□ -0.33
TRIM47-204ENST00000587339 RPL28P46779 137 aaKnown RBP12.96□□□□□ -0.33
TRIM47-204ENST00000587339 WFDC2Q14508 124 aa12.96□□□□□ -0.33
TRIM47-204ENST00000587339 GAGE2EQ4V326 116 aa12.96□□□□□ -0.33
TRIM47-204ENST00000587339 GAGE2DQ9UEU5 116 aa12.96□□□□□ -0.33
TRIM47-204ENST00000587339 NCR3O14931 201 aa12.96□□□□□ -0.34
TRIM47-204ENST00000587339 ATXN8Q156A1 80 aa12.96□□□□□ -0.34
TRIM47-204ENST00000587339 SMIM11BQ8TCY0 68 aa12.96□□□□□ -0.34
TRIM47-204ENST00000587339 F8W1H4 67 aa12.95□□□□□ -0.34
TRIM47-204ENST00000587339 TGP01266 2768 aa12.95□□□□□ -0.34
TRIM47-204ENST00000587339 TMEM126AQ9H061 195 aa12.94□□□□□ -0.34
TRIM47-204ENST00000587339 MTURNQ8N3F0 131 aa12.94□□□□□ -0.34
TRIM47-204ENST00000587339 CLEC2BQ92478 149 aa12.94□□□□□ -0.34
TRIM47-204ENST00000587339 M0R2N4 97 aa12.93□□□□□ -0.34
TRIM47-204ENST00000587339 TLX1NBP0CAT3 122 aa12.93□□□□□ -0.34
TRIM47-204ENST00000587339 RPL18AQ02543 176 aaKnown RBP12.92□□□□□ -0.34
TRIM47-204ENST00000587339 S100A7L2Q5SY68 101 aa12.92□□□□□ -0.34
TRIM47-204ENST00000587339 PRO0461Q9UI25 63 aa12.91□□□□□ -0.34
TRIM47-204ENST00000587339 TRBV10-2A0A0K0K1G8 114 aa12.9□□□□□ -0.34
TRIM47-204ENST00000587339 C14orf177Q52M58 125 aa12.9□□□□□ -0.34
TRIM47-204ENST00000587339 LST1O00453 97 aa12.9□□□□□ -0.35
TRIM47-204ENST00000587339 Q6ZRN7 208 aaPredicted RBP12.89□□□□□ -0.35
TRIM47-204ENST00000587339 DNAH10Q8IVF4 4471 aa12.89□□□□□ -0.35
TRIM47-204ENST00000587339 VPREB1P12018 145 aa12.88□□□□□ -0.35
TRIM47-204ENST00000587339 C9orf129Q5T035 196 aaKnown RBP12.88□□□□□ -0.35
TRIM47-204ENST00000587339 VPS13DQ5THJ4 4388 aa12.88□□□□□ -0.35
TRIM47-204ENST00000587339 C9JAW5 83 aa12.88□□□□□ -0.35
TRIM47-204ENST00000587339 LINC01620Q4KN68 170 aa12.88□□□□□ -0.35
TRIM47-204ENST00000587339 CNBPP62633 177 aaKnown RBP12.87□□□□□ -0.35
TRIM47-204ENST00000587339 LRCOL1A6NCL2 159 aa12.86□□□□□ -0.35
TRIM47-204ENST00000587339 IGLV6-57P01721 117 aa12.86□□□□□ -0.35
TRIM47-204ENST00000587339 LOC107984640A0A0U1RRK4 108 aa12.85□□□□□ -0.35
TRIM47-204ENST00000587339 H0YGX0 51 aa12.85□□□□□ -0.35
TRIM47-204ENST00000587339 LY6G6CO95867 125 aa12.85□□□□□ -0.35
TRIM47-204ENST00000587339 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.84□□□□□ -0.35
TRIM47-204ENST00000587339 SMCPP49901 116 aaPredicted RBP12.84□□□□□ -0.35
TRIM47-204ENST00000587339 Q6ZR54 194 aa12.84□□□□□ -0.35
TRIM47-204ENST00000587339 SLC25A20O43772 301 aa12.84□□□□□ -0.35
TRIM47-204ENST00000587339 GAGE2BQ13066 116 aa12.84□□□□□ -0.35
TRIM47-204ENST00000587339 FAM218AQ96MZ4 157 aa12.83□□□□□ -0.36
TRIM47-204ENST00000587339 TRBV10-3A0A0K0K1G6 114 aa12.82□□□□□ -0.36
TRIM47-204ENST00000587339 M0R378 163 aa12.82□□□□□ -0.36
TRIM47-204ENST00000587339 ETDBQ3ZM63 59 aa12.81□□□□□ -0.36
TRIM47-204ENST00000587339 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
TRIM47-204ENST00000587339 C6orf99Q4VX62 202 aa12.8□□□□□ -0.36
TRIM47-204ENST00000587339 LINC00476Q8WZB0 136 aa12.8□□□□□ -0.36
TRIM47-204ENST00000587339 TRACP01848 142 aa12.8□□□□□ -0.36
TRIM47-204ENST00000587339 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
TRIM47-204ENST00000587339 SERTAD4-AS1Q5TG53 156 aa12.79□□□□□ -0.36
TRIM47-204ENST00000587339 PLA2G2DQ9UNK4 145 aa12.79□□□□□ -0.36
TRIM47-204ENST00000587339 TRAV23DV6A0A075B6W5 121 aa12.78□□□□□ -0.36
TRIM47-204ENST00000587339 ANKRD29Q8N6D5 301 aa12.78□□□□□ -0.36
TRIM47-204ENST00000587339 A0A087WYN8 130 aa12.77□□□□□ -0.37
TRIM47-204ENST00000587339 FAM168BA1KXE4 195 aa12.76□□□□□ -0.37
TRIM47-204ENST00000587339 M0QXV9 152 aa12.76□□□□□ -0.37
TRIM47-204ENST00000587339 Q8N814 137 aa12.76□□□□□ -0.37
TRIM47-204ENST00000587339 C16orf90A8MZG2 172 aa12.75□□□□□ -0.37
TRIM47-204ENST00000587339 H3BT86 120 aa12.74□□□□□ -0.37
TRIM47-204ENST00000587339 DNAL4O96015 105 aa12.74□□□□□ -0.37
TRIM47-204ENST00000587339 C1orf134Q5TEV5 83 aa12.74□□□□□ -0.37
TRIM47-204ENST00000587339 A0A087WTM6 91 aa12.74□□□□□ -0.37
TRIM47-204ENST00000587339 A0A096LNI7 61 aa12.74□□□□□ -0.37
TRIM47-204ENST00000587339 C9orf163Q8N9P6 203 aa12.74□□□□□ -0.37
TRIM47-204ENST00000587339 KMT2AQ03164 3969 aa12.73□□□□□ -0.37
TRIM47-204ENST00000587339 ZNF73O43830 326 aaPredicted RBP12.73□□□□□ -0.37
TRIM47-204ENST00000587339 TEN1Q86WV5 123 aa12.73□□□□□ -0.37
TRIM47-204ENST00000587339 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
TRIM47-204ENST00000587339 LINC01600Q96MT4 127 aa12.73□□□□□ -0.37
TRIM47-204ENST00000587339 IGLV5-37A0A075B6J1 123 aa12.72□□□□□ -0.37
TRIM47-204ENST00000587339 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
TRIM47-204ENST00000587339 C7orf33Q8WU49 177 aa12.72□□□□□ -0.37
TRIM47-204ENST00000587339 SCGB1A1P11684 91 aa12.72□□□□□ -0.37
TRIM47-204ENST00000587339 FAM19A5Q7Z5A7 132 aaPredicted RBP12.71□□□□□ -0.37
TRIM47-204ENST00000587339 KRTAP7-1Q8IUC3 87 aa12.7□□□□□ -0.38
TRIM47-204ENST00000587339 A0A1B0GX51 115 aa12.7□□□□□ -0.38
TRIM47-204ENST00000587339 PKIGQ9Y2B9 76 aa12.7□□□□□ -0.38
TRIM47-204ENST00000587339 C22orf24Q9Y442 160 aa12.69□□□□□ -0.38
TRIM47-204ENST00000587339 SNCGO76070 127 aa12.68□□□□□ -0.38
TRIM47-204ENST00000587339 BAALC-AS2P0C853 105 aa12.68□□□□□ -0.38
TRIM47-204ENST00000587339 LINC00575Q6W349 94 aa12.67□□□□□ -0.38
TRIM47-204ENST00000587339 MRPL55Q7Z7F7 128 aaKnown RBP12.67□□□□□ -0.38
TRIM47-204ENST00000587339 J3QR89 54 aa12.66□□□□□ -0.38
TRIM47-204ENST00000587339 KCNQ1DNQ9H478 68 aa12.66□□□□□ -0.38
TRIM47-204ENST00000587339 TRBV7-6A0A0J9YX20 115 aa12.66□□□□□ -0.38
TRIM47-204ENST00000587339 SDIM1Q6ZPB5 146 aa12.66□□□□□ -0.38
TRIM47-204ENST00000587339 LINC00167Q96N53 147 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms