RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, human

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01140-208	ENST00000587165	BCE1	O60756	84 aa		3.12	□□□□□ -1.91
LINC01140-208	ENST00000587165	DPM2	O94777	84 aa		3.12	□□□□□ -1.91
LINC01140-208	ENST00000587165	PLEKHB2	Q96CS7	222 aa		3.12	□□□□□ -1.91
LINC01140-208	ENST00000587165	LINC00167	Q96N53	147 aa		3.12	□□□□□ -1.91
LINC01140-208	ENST00000587165	SND1-IT1	Q9HBX3	110 aa		3.12	□□□□□ -1.91
LINC01140-208	ENST00000587165	IGKV2-28	A0A075B6P5	120 aa		3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165	RPL37AP8	A6NKH3	93 aa		3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165	IGKV2D-28	P01615	120 aa		3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165	FABP4	P15090	132 aa		3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165	LGALS3	P17931	250 aa	Known RBP	3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165	KRTAP7-1	Q8IUC3	87 aa		3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165	MIEN1	Q9BRT3	115 aa		3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165	NDUFA12	Q9UI09	145 aa		3.11	□□□□□ -1.91
LINC01140-208	ENST00000587165		A0A0U1RRA0	63 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	COLCA2	A8K830	154 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	LEPROT	O15243	131 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	IGKC	P01834	107 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	VPREB1	P12018	145 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	NMU	P48645	174 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	KRTAP10-8	P60410	259 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	KRTAP11-1	Q8IUC1	163 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	BOD1L2	Q8IYS8	172 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	PRR26	Q8N8Z3	221 aa		3.1	□□□□□ -1.91
LINC01140-208	ENST00000587165	C20orf202	A1L168	122 aa		3.09	□□□□□ -1.91
LINC01140-208	ENST00000587165		J3QQQ9	107 aa		3.09	□□□□□ -1.91
LINC01140-208	ENST00000587165		M0R378	163 aa		3.09	□□□□□ -1.91
LINC01140-208	ENST00000587165	SMIM13	P0DJ93	91 aa		3.09	□□□□□ -1.91
LINC01140-208	ENST00000587165	CRYGA	P11844	174 aa		3.09	□□□□□ -1.91
LINC01140-208	ENST00000587165	FAM19A1	Q7Z5A9	133 aa		3.09	□□□□□ -1.91
LINC01140-208	ENST00000587165	MIR7-3HG	Q8N6C7	128 aa		3.09	□□□□□ -1.91
LINC01140-208	ENST00000587165	IGKV2D-26	A0A0A0MRZ7	120 aa		3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	PRY	O14603	147 aa		3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	AKR1D1	P51857	326 aa		3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	LINC00310	P59036	64 aa		3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	TMEM126A	Q9H061	195 aa		3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	CBY1	Q9Y3M2	126 aa		3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	LRP1	Q07954	4544 aa	Known RBP	3.08	□□□□□ -1.92
LINC01140-208	ENST00000587165	ETDC	A0A1B0GVM5	59 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	SYS1-DBNDD2	H3BUS1	97 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	NCR3	O14931	201 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BK	O60814	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	SCO1	O75880	301 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BJ	P06899	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	KRTAP1-4	P0C5Y4	121 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BO	P23527	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BB	P33778	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BD	P58876	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BC	P62807	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	PRLH	P81277	87 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST2H2BE	Q16778	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	PET117	Q6UWS5	81 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	TYMSOS	Q8TAI1	123 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BH	Q93079	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BN	Q99877	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIST1H2BM	Q99879	126 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	PMCHL2	Q9BQD1	86 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	HIGD2A	Q9BW72	106 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	SPANXB1	Q9NS25	103 aa	Predicted RBP	3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	PKHD1L1	Q86WI1	4243 aa		3.07	□□□□□ -1.92
LINC01140-208	ENST00000587165	TMEM238	C9JI98	176 aa		3.06	□□□□□ -1.92
LINC01140-208	ENST00000587165		E9PLD3	99 aa		3.06	□□□□□ -1.92
LINC01140-208	ENST00000587165	FAM229B	Q4G0N7	80 aa		3.06	□□□□□ -1.92
LINC01140-208	ENST00000587165	S100A7L2	Q5SY68	101 aa		3.06	□□□□□ -1.92
LINC01140-208	ENST00000587165	COPS9	Q8WXC6	57 aa		3.06	□□□□□ -1.92
LINC01140-208	ENST00000587165	TRBV10-3	A0A0K0K1G6	114 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	TRBV10-2	A0A0K0K1G8	114 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	DDT	P30046	118 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	HINT1	P49773	126 aa	Predicted RBP	3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	TSPEAR-AS2	P59090	65 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	KRTDAP	P60985	99 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	JOSD1	Q15040	202 aa	Predicted RBP	3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	LINC01545	Q5VT33	79 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	KRTAP13-1	Q8IUC0	172 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	LINC00337	Q8N6G1	96 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	DAND5	Q8N907	189 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	KCNQ1DN	Q9H478	68 aa		3.05	□□□□□ -1.92
LINC01140-208	ENST00000587165	FAT3	Q8TDW7	4589 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	LOC107984156	A0A0G2JMH3	177 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	ZNF815P	A8K554	130 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	TIMM17B	O60830	172 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	NDUFC2	O95298	119 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	S100A1	P23297	94 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	S100A2	P29034	98 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	PRR4	Q16378	134 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	COA6	Q5JTJ3	125 aa	Known RBP	3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	SCGB1D4	Q6XE38	83 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	ARL17A	Q8IVW1	177 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	LINC00304	Q8N9R0	145 aa		3.04	□□□□□ -1.92
LINC01140-208	ENST00000587165	TRAV23DV6	A0A075B6W5	121 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165		A0A087X002	238 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165		A0A0J9YXY3	114 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165	HSBP1L1	C9JCN9	74 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165	TSPAN13	O95857	204 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165	S100A6	P06703	90 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165	C3orf79	P0CE67	100 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165	NPC2	P61916	151 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165		Q8NDZ9	215 aa		3.03	□□□□□ -1.92
LINC01140-208	ENST00000587165	SPANXC	Q9NY87	97 aa		3.03	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms