RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 HERVK_113P61574 105 aa12.23□□□□□ -0.45
VAT1-203ENST00000587062 PRR26Q8N8Z3 221 aa12.23□□□□□ -0.45
VAT1-203ENST00000587062 VPREB1P12018 145 aa12.22□□□□□ -0.45
VAT1-203ENST00000587062 IGKV2-28A0A075B6P5 120 aa12.21□□□□□ -0.45
VAT1-203ENST00000587062 DPM2O94777 84 aa12.21□□□□□ -0.45
VAT1-203ENST00000587062 IGKV2D-28P01615 120 aa12.21□□□□□ -0.45
VAT1-203ENST00000587062 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.45
VAT1-203ENST00000587062 NDUFA12Q9UI09 145 aa12.21□□□□□ -0.45
VAT1-203ENST00000587062 A0A0U1RRA0 63 aa12.2□□□□□ -0.46
VAT1-203ENST00000587062 LINC00310P59036 64 aa12.19□□□□□ -0.46
VAT1-203ENST00000587062 LEPROTO15243 131 aa12.18□□□□□ -0.46
VAT1-203ENST00000587062 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
VAT1-203ENST00000587062 IGKCP01834 107 aa12.17□□□□□ -0.46
VAT1-203ENST00000587062 KRTAP1-4P0C5Y4 121 aa12.17□□□□□ -0.46
VAT1-203ENST00000587062 M0R378 163 aa12.15□□□□□ -0.46
VAT1-203ENST00000587062 SCO1O75880 301 aa12.15□□□□□ -0.46
VAT1-203ENST00000587062 LGALS3P17931 250 aaKnown RBP12.15□□□□□ -0.46
VAT1-203ENST00000587062 NMUP48645 174 aa12.15□□□□□ -0.46
VAT1-203ENST00000587062 FAM19A1Q7Z5A9 133 aa12.15□□□□□ -0.46
VAT1-203ENST00000587062 MIR7-3HGQ8N6C7 128 aa12.15□□□□□ -0.46
VAT1-203ENST00000587062 S100A12P80511 92 aa12.14□□□□□ -0.47
VAT1-203ENST00000587062 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
VAT1-203ENST00000587062 TMEM126AQ9H061 195 aa12.14□□□□□ -0.47
VAT1-203ENST00000587062 J3QQQ9 107 aa12.13□□□□□ -0.47
VAT1-203ENST00000587062 CRYGAP11844 174 aa12.13□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BKO60814 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BJP06899 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BOP23527 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BBP33778 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BDP58876 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BCP62807 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST2H2BEQ16778 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BHQ93079 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BNQ99877 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 HIST1H2BMQ99879 126 aa12.12□□□□□ -0.47
VAT1-203ENST00000587062 IGKV2D-26A0A0A0MRZ7 120 aa12.11□□□□□ -0.47
VAT1-203ENST00000587062 PMCHL2Q9BQD1 86 aa12.1□□□□□ -0.47
VAT1-203ENST00000587062 MIEN1Q9BRT3 115 aa12.1□□□□□ -0.47
VAT1-203ENST00000587062 TMEM238C9JI98 176 aa12.09□□□□□ -0.47
VAT1-203ENST00000587062 TNXBP22105 4242 aa12.08□□□□□ -0.48
VAT1-203ENST00000587062 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.48
VAT1-203ENST00000587062 SYS1-DBNDD2H3BUS1 97 aa12.07□□□□□ -0.48
VAT1-203ENST00000587062 PRLHP81277 87 aa12.07□□□□□ -0.48
VAT1-203ENST00000587062 TYMSOSQ8TAI1 123 aa12.07□□□□□ -0.48
VAT1-203ENST00000587062 PRYO14603 147 aa12.06□□□□□ -0.48
VAT1-203ENST00000587062 Q8NDZ9 215 aa12.06□□□□□ -0.48
VAT1-203ENST00000587062 HMCN2Q8NDA2 5059 aa12.06□□□□□ -0.48
VAT1-203ENST00000587062 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
VAT1-203ENST00000587062 FAM229BQ4G0N7 80 aa12.05□□□□□ -0.48
VAT1-203ENST00000587062 PET117Q6UWS5 81 aa12.05□□□□□ -0.48
VAT1-203ENST00000587062 NCR3O14931 201 aa12.04□□□□□ -0.48
VAT1-203ENST00000587062 E9PLD3 99 aa12.03□□□□□ -0.48
VAT1-203ENST00000587062 LOC107984156A0A0G2JMH3 177 aa12.02□□□□□ -0.49
VAT1-203ENST00000587062 ARL17AQ8IVW1 177 aa12.02□□□□□ -0.49
VAT1-203ENST00000587062 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
VAT1-203ENST00000587062 KCNQ1DNQ9H478 68 aa12.01□□□□□ -0.49
VAT1-203ENST00000587062 A0A087X002 238 aa12□□□□□ -0.49
VAT1-203ENST00000587062 TRBV10-2A0A0K0K1G8 114 aa12□□□□□ -0.49
VAT1-203ENST00000587062 ETDCA0A1B0GVM5 59 aa12□□□□□ -0.49
VAT1-203ENST00000587062 LINC01545Q5VT33 79 aa12□□□□□ -0.49
VAT1-203ENST00000587062 LINC00337Q8N6G1 96 aa12□□□□□ -0.49
VAT1-203ENST00000587062 DAND5Q8N907 189 aa12□□□□□ -0.49
VAT1-203ENST00000587062 ZNF706Q9Y5V0 76 aaPredicted RBP12□□□□□ -0.49
VAT1-203ENST00000587062 S100A1P23297 94 aa11.99□□□□□ -0.49
VAT1-203ENST00000587062 C20orf202A1L168 122 aa11.98□□□□□ -0.49
VAT1-203ENST00000587062 NDUFC2O95298 119 aa11.98□□□□□ -0.49
VAT1-203ENST00000587062 S100A7L2Q5SY68 101 aa11.98□□□□□ -0.49
VAT1-203ENST00000587062 SPANXB1Q9NS25 103 aaPredicted RBP11.98□□□□□ -0.49
VAT1-203ENST00000587062 CBY1Q9Y3M2 126 aa11.98□□□□□ -0.49
VAT1-203ENST00000587062 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
VAT1-203ENST00000587062 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
VAT1-203ENST00000587062 DDTP30046 118 aa11.97□□□□□ -0.49
VAT1-203ENST00000587062 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
VAT1-203ENST00000587062 ANAPC11Q9NYG5 84 aa11.97□□□□□ -0.49
VAT1-203ENST00000587062 AKR1D1P51857 326 aa11.96□□□□□ -0.49
VAT1-203ENST00000587062 KRTDAPP60985 99 aa11.95□□□□□ -0.5
VAT1-203ENST00000587062 TSPAN13O95857 204 aa11.94□□□□□ -0.5
VAT1-203ENST00000587062 C3orf79P0CE67 100 aa11.94□□□□□ -0.5
VAT1-203ENST00000587062 SPRR1AP35321 89 aa11.94□□□□□ -0.5
VAT1-203ENST00000587062 PRR4Q16378 134 aa11.94□□□□□ -0.5
VAT1-203ENST00000587062 ZNF815PA8K554 130 aa11.91□□□□□ -0.5
VAT1-203ENST00000587062 TIMM17BO60830 172 aa11.91□□□□□ -0.5
VAT1-203ENST00000587062 CTAG1AP78358 180 aa11.91□□□□□ -0.5
VAT1-203ENST00000587062 LINC00304Q8N9R0 145 aa11.91□□□□□ -0.5
VAT1-203ENST00000587062 HINT1P49773 126 aaPredicted RBP11.9□□□□□ -0.5
VAT1-203ENST00000587062 NPC2P61916 151 aa11.9□□□□□ -0.5
VAT1-203ENST00000587062 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
VAT1-203ENST00000587062 SMCR5Q8TEV8 140 aa11.9□□□□□ -0.5
VAT1-203ENST00000587062 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
VAT1-203ENST00000587062 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
VAT1-203ENST00000587062 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
VAT1-203ENST00000587062 KRTAP4-16G5E9R7 235 aaPredicted RBP11.87□□□□□ -0.51
VAT1-203ENST00000587062 IGLV6-57P01721 117 aa11.87□□□□□ -0.51
VAT1-203ENST00000587062 COPS9Q8WXC6 57 aa11.87□□□□□ -0.51
VAT1-203ENST00000587062 SPANXCQ9NY87 97 aa11.87□□□□□ -0.51
VAT1-203ENST00000587062 TRAV23DV6A0A075B6W5 121 aa11.86□□□□□ -0.51
VAT1-203ENST00000587062 B5MCH6 92 aa11.86□□□□□ -0.51
VAT1-203ENST00000587062 C4orf48Q5BLP8 95 aa11.86□□□□□ -0.51
VAT1-203ENST00000587062 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms