RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 LINC00158P58513 81 aa11.4□□□□□ -0.58
TPM4-204ENST00000586499 IGLV1-50A0A075B6I6 118 aa11.38□□□□□ -0.59
TPM4-204ENST00000586499 RPL28P46779 137 aaKnown RBP11.38□□□□□ -0.59
TPM4-204ENST00000586499 SMIM13P0DJ93 91 aa11.37□□□□□ -0.59
TPM4-204ENST00000586499 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
TPM4-204ENST00000586499 LRP2P98164 4655 aa11.35□□□□□ -0.59
TPM4-204ENST00000586499 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
TPM4-204ENST00000586499 PMCHL2Q9BQD1 86 aa11.35□□□□□ -0.59
TPM4-204ENST00000586499 HSPB8Q9UJY1 196 aa11.35□□□□□ -0.59
TPM4-204ENST00000586499 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
TPM4-204ENST00000586499 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
TPM4-204ENST00000586499 UBE2AP49459 152 aa11.33□□□□□ -0.6
TPM4-204ENST00000586499 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.6
TPM4-204ENST00000586499 MEIG1Q5JSS6 88 aa11.33□□□□□ -0.6
TPM4-204ENST00000586499 TMEM126AQ9H061 195 aa11.32□□□□□ -0.6
TPM4-204ENST00000586499 DPM2O94777 84 aa11.31□□□□□ -0.6
TPM4-204ENST00000586499 PLNP26678 52 aa11.31□□□□□ -0.6
TPM4-204ENST00000586499 HERV-K104P63124 156 aa11.31□□□□□ -0.6
TPM4-204ENST00000586499 PRLHP81277 87 aa11.31□□□□□ -0.6
TPM4-204ENST00000586499 MIR7-3HGQ8N6C7 128 aa11.31□□□□□ -0.6
TPM4-204ENST00000586499 ANAPC11Q9NYG5 84 aa11.31□□□□□ -0.6
TPM4-204ENST00000586499 A0A087X002 238 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 M0R378 163 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 LEPROTO15243 131 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
TPM4-204ENST00000586499 MYMXA0A1B0GTQ4 84 aa11.29□□□□□ -0.6
TPM4-204ENST00000586499 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
TPM4-204ENST00000586499 IGKCP01834 107 aa11.28□□□□□ -0.6
TPM4-204ENST00000586499 BOD1L2Q8IYS8 172 aa11.28□□□□□ -0.6
TPM4-204ENST00000586499 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
TPM4-204ENST00000586499 J3QQQ9 107 aa11.27□□□□□ -0.61
TPM4-204ENST00000586499 PLEKHB2Q96CS7 222 aa11.27□□□□□ -0.61
TPM4-204ENST00000586499 DAND5Q8N907 189 aa11.26□□□□□ -0.61
TPM4-204ENST00000586499 LINC00587B1AMM8 73 aa11.25□□□□□ -0.61
TPM4-204ENST00000586499 NCR3O14931 201 aa11.25□□□□□ -0.61
TPM4-204ENST00000586499 HERVK_113P61574 105 aa11.25□□□□□ -0.61
TPM4-204ENST00000586499 LPAP08519 4548 aa11.25□□□□□ -0.61
TPM4-204ENST00000586499 CRYGAP11844 174 aa11.24□□□□□ -0.61
TPM4-204ENST00000586499 SYS1-DBNDD2H3BUS1 97 aa11.22□□□□□ -0.61
TPM4-204ENST00000586499 LGALS3P17931 250 aaKnown RBP11.22□□□□□ -0.61
TPM4-204ENST00000586499 KRTAP13-2Q52LG2 175 aa11.21□□□□□ -0.61
TPM4-204ENST00000586499 TYMSOSQ8TAI1 123 aa11.21□□□□□ -0.61
TPM4-204ENST00000586499 TSPAN13O95857 204 aa11.2□□□□□ -0.62
TPM4-204ENST00000586499 HIGD2AQ9BW72 106 aa11.2□□□□□ -0.62
TPM4-204ENST00000586499 NMUP48645 174 aa11.19□□□□□ -0.62
TPM4-204ENST00000586499 IGKV2D-26A0A0A0MRZ7 120 aa11.18□□□□□ -0.62
TPM4-204ENST00000586499 TRBV10-3A0A0K0K1G6 114 aa11.18□□□□□ -0.62
TPM4-204ENST00000586499 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
TPM4-204ENST00000586499 E9PLD3 99 aa11.17□□□□□ -0.62
TPM4-204ENST00000586499 PRYO14603 147 aa11.17□□□□□ -0.62
TPM4-204ENST00000586499 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
TPM4-204ENST00000586499 FAM229BQ4G0N7 80 aa11.16□□□□□ -0.62
TPM4-204ENST00000586499 KCNQ1DNQ9H478 68 aa11.16□□□□□ -0.62
TPM4-204ENST00000586499 A0A0J9YXY3 114 aa11.15□□□□□ -0.62
TPM4-204ENST00000586499 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.62
TPM4-204ENST00000586499 LINC01545Q5VT33 79 aa11.15□□□□□ -0.62
TPM4-204ENST00000586499 EIF4EBP3O60516 100 aaPredicted RBP11.14□□□□□ -0.63
TPM4-204ENST00000586499 SPRR1AP35321 89 aa11.14□□□□□ -0.63
TPM4-204ENST00000586499 NPC2P61916 151 aa11.14□□□□□ -0.63
TPM4-204ENST00000586499 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
TPM4-204ENST00000586499 KRTAP4-16G5E9R7 235 aaPredicted RBP11.13□□□□□ -0.63
TPM4-204ENST00000586499 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
TPM4-204ENST00000586499 PRR4Q16378 134 aa11.13□□□□□ -0.63
TPM4-204ENST00000586499 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
TPM4-204ENST00000586499 SOSTDC1Q6X4U4 206 aa11.13□□□□□ -0.63
TPM4-204ENST00000586499 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
TPM4-204ENST00000586499 MIEN1Q9BRT3 115 aa11.12□□□□□ -0.63
TPM4-204ENST00000586499 ETDCA0A1B0GVM5 59 aa11.11□□□□□ -0.63
TPM4-204ENST00000586499 DDTP30046 118 aa11.11□□□□□ -0.63
TPM4-204ENST00000586499 C3orf22Q8N5N4 141 aa11.1□□□□□ -0.63
TPM4-204ENST00000586499 SPRR4Q96PI1 79 aa11.1□□□□□ -0.63
TPM4-204ENST00000586499 TRBV10-2A0A0K0K1G8 114 aa11.09□□□□□ -0.63
TPM4-204ENST00000586499 KRTDAPP60985 99 aa11.09□□□□□ -0.63
TPM4-204ENST00000586499 SMCR5Q8TEV8 140 aa11.09□□□□□ -0.63
TPM4-204ENST00000586499 SPANXB1Q9NS25 103 aaPredicted RBP11.09□□□□□ -0.63
TPM4-204ENST00000586499 RNF213Q63HN8 5207 aa11.08□□□□□ -0.64
TPM4-204ENST00000586499 TTTY13Q9BZ97 58 aa11.08□□□□□ -0.64
TPM4-204ENST00000586499 B5MCH6 92 aa11.07□□□□□ -0.64
TPM4-204ENST00000586499 NDUFC2O95298 119 aa11.07□□□□□ -0.64
TPM4-204ENST00000586499 LINC00304Q8N9R0 145 aa11.07□□□□□ -0.64
TPM4-204ENST00000586499 LITAFQ99732 161 aa11.07□□□□□ -0.64
TPM4-204ENST00000586499 S100A12P80511 92 aa11.06□□□□□ -0.64
TPM4-204ENST00000586499 IGLV6-57P01721 117 aa11.05□□□□□ -0.64
TPM4-204ENST00000586499 S100A7L2Q5SY68 101 aa11.05□□□□□ -0.64
TPM4-204ENST00000586499 PPDPFQ9H3Y8 114 aa11.05□□□□□ -0.64
TPM4-204ENST00000586499 ZNF815PA8K554 130 aa11.04□□□□□ -0.64
TPM4-204ENST00000586499 ERC2-IT1O76042 136 aa11.03□□□□□ -0.64
TPM4-204ENST00000586499 LINC00308Q8TCZ7 52 aa11.03□□□□□ -0.64
TPM4-204ENST00000586499 RETNLBQ9BQ08 111 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms